chr7 : 123,660,892 – 123,661,277
385 bp 43 TFs 1 linked gene
This 385 bp open chromatin element is linked to LMOD2 and is bound by 43 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
LMOD2 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr7:123,655,892 – 123,666,277
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 ERP001226.AR.MCF-7 284 bp overlap
ARID1A 3 datasets
ChIP MCF-7 GSE123284.ARID1A.MCF-7 233 bp overlap
ChIP MCF-7_4-hydroxytamoxifen GSE123284.ARID1A.MCF-7_4-hydroxytamoxifen 385 bp overlap
ChIP MCF-7_JQ1 GSE123284.ARID1A.MCF-7_JQ1 77 bp overlap
BRD4 4 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 190 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.BRD4.MCF-7_ARID1A-KO 385 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.BRD4.MCF-7_ARID1A-KO_4-OHT 385 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.BRD4.MCF-7_parental_4-hydroxytamoxifen 306 bp overlap
CBFA2T3 1 dataset
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 215 bp overlap
CTBP2 1 dataset
ChIP MCF-7 GSE107013.CTBP2.MCF-7 188 bp overlap
E2F1 1 dataset
ChIP MCF-7 ENCSR000EWX.E2F1.MCF-7 272 bp overlap
ESR1 35 datasets
ChIP MCF-7 GSE103023.ESR1.MCF-7 380 bp overlap
ChIP MCF-7 GSE41561.ESR1.MCF-7 284 bp overlap
ChIP MCF-7 GSE68355.ESR1.MCF-7 314 bp overlap
ChIP MCF-7 GSE76893.ESR1.MCF-7 203 bp overlap
ChIP MCF-7 GSE95302.ESR1.MCF-7 231 bp overlap
ChIP MCF-7_4OH-Tam GSE117941.ESR1.MCF-7_4OH-Tam 216 bp overlap
ChIP MCF-7_ARID1A-KO GSE123284.ESR1.MCF-7_ARID1A-KO 355 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT 357 bp overlap
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_4-OHT_clone14 336 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.ESR1.MCF-7_ARID1A-KO_clone14 385 bp overlap
ChIP MCF-7_AZD2014 GSE103023.ESR1.MCF-7_AZD2014 331 bp overlap
ChIP MCF-7_DMSO GSE125594.ESR1.MCF-7_DMSO 227 bp overlap
ChIP MCF-7_E2 ERP000209.ESR1.MCF-7_E2 117 bp overlap
ChIP MCF-7_E2+4OHT GSE119702.ESR1.MCF-7_E2+4OHT 253 bp overlap
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 306 bp overlap
ChIP MCF-7_E2_talen GSE94493.ESR1.MCF-7_E2_talen 226 bp overlap
ChIP MCF-7_HC11 GSE102882.ESR1.MCF-7_HC11 385 bp overlap
ChIP MCF-7_OHT GSE119702.ESR1.MCF-7_OHT 253 bp overlap
ChIP MCF-7_PROG GSE68355.ESR1.MCF-7_PROG 372 bp overlap
ChIP MCF-7_R5020 GSE68355.ESR1.MCF-7_R5020 342 bp overlap
ChIP MCF-7_RAD001 GSE103023.ESR1.MCF-7_RAD001 369 bp overlap
ChIP MCF-7_SHCRT_E2 ERP000380.ESR1.MCF-7_SHCRT_E2 111 bp overlap
ChIP MCF-7_SICTR_E2 GSE40129.ESR1.MCF-7_SICTR_E2 123 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 306 bp overlap
ChIP MCF-7_Veh GSE117941.ESR1.MCF-7_Veh 199 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 295 bp overlap
ChIP MCF-7_jc5849 GSE126004.ESR1.MCF-7_jc5849 343 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 319 bp overlap
ChIP MCF-7_jc5856 GSE126004.ESR1.MCF-7_jc5856 261 bp overlap
ChIP MCF-7_parental GSE123284.ESR1.MCF-7_parental 385 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.ESR1.MCF-7_parental_4-hydroxytamoxifen 385 bp overlap
ChIP MCF-7_shFbxo GSE119702.ESR1.MCF-7_shFbxo 232 bp overlap
ChIP MCF-7_shFbxo_E2 GSE119702.ESR1.MCF-7_shFbxo_E2 232 bp overlap
ChIP MCF-7_shFbxo_E2_4OHT GSE119702.ESR1.MCF-7_shFbxo_E2_4OHT 156 bp overlap
ChIP MCF-7_shFbxo_OHT GSE119702.ESR1.MCF-7_shFbxo_OHT 156 bp overlap
ESR1_Y537N 3 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 136 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 161 bp overlap
ChIP MCF-7_talen GSE94493.ESR1_Y537N.MCF-7_talen 167 bp overlap
ESR1_Y537S 2 datasets
ChIP MCF-7_E2 GSE94493.ESR1_Y537S.MCF-7_E2 237 bp overlap
ChIP MCF-7_dox GSE94493.ESR1_Y537S.MCF-7_dox 178 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 383 bp overlap
FOXA1 2 datasets
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 185 bp overlap
ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 199 bp overlap
FOXA2 1 dataset
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 181 bp overlap
GATA1 4 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 81 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 142 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 151 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 353 bp overlap
GATA2 4 datasets
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
ChIP SH-SY5Y ENCFF485YIB 289 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 233 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 197 bp overlap
GATA3 13 datasets
ChIP Kelly GSE65664.GATA3.Kelly 199 bp overlap
ChIP MCF-7 ENCFF437NQS 288 bp overlap
ChIP MCF-7 ENCSR000EWS.GATA3.MCF-7 281 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 228 bp overlap
ChIP MCF-7 GSE51274.GATA3.MCF-7 279 bp overlap
ChIP MCF-7 GSE122847.GATA3.MCF-7 234 bp overlap
ChIP MCF-7 GSE117492.GATA3.MCF-7 184 bp overlap
ChIP MCF-7_DMSO GSE29073.GATA3.MCF-7_DMSO 131 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 265 bp overlap
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 247 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 259 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 139 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 206 bp overlap
GATA4 7 datasets
ChIP DE DE-GATA4-1 385 bp overlap
ChIP DE DE-GATA4-2 385 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP cardiomyocyte_7 GSE85628.GATA4.cardiomyocyte_7 291 bp overlap
ChIP foregut GSE117136.GATA4.foregut 385 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 385 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 385 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 12 datasets
ChIP DE DE-GATA6-1 385 bp overlap
ChIP DE DE-GATA6-2 385 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 338 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 351 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 383 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 385 bp overlap
ChIP foregut GSE117136.GATA6.foregut 311 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 385 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 321 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 385 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 385 bp overlap
Gata3 1 dataset
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
HDAC1 2 datasets
ChIP MCF-7_parental GSE123284.HDAC1.MCF-7_parental 218 bp overlap
ChIP MCF-7_parental_4-hydroxytamoxifen GSE123284.HDAC1.MCF-7_parental_4-hydroxytamoxifen 299 bp overlap
HNF4A 4 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 104 bp overlap
ChIP liver ENCFF354NRH 355 bp overlap
ChIP liver ENCFF449HPV 119 bp overlap
ChIP liver ERP002306.HNF4A.liver 259 bp overlap
JUND 1 dataset
ChIP liver ENCSR837GTK.JUND.liver 182 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 166 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 75 bp overlap
MED1 1 dataset
ChIP G296S_4 GSE85628.MED1.G296S_4 204 bp overlap
NEUROD1 2 datasets
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 385 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 152 bp overlap
NR2F2 1 dataset
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 262 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 195 bp overlap
PGR 1 dataset
ChIP MCF-7_PROG GSE68355.PGR.MCF-7_PROG 319 bp overlap
POLR2A 1 dataset
ChIP gastrocnemius medialis ENCFF145VIB 226 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 385 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 337 bp overlap
SMARCA4 3 datasets
ChIP MCF-7_ARID1A-KO_4-OHT_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_4-OHT_clone14 385 bp overlap
ChIP MCF-7_ARID1A-KO_clone14 GSE123284.SMARCA4.MCF-7_ARID1A-KO_clone14 206 bp overlap
ChIP MCF-7_parental GSE123284.SMARCA4.MCF-7_parental 299 bp overlap
SMARCB1 1 dataset
ChIP MCF-7_4-hydroxytamoxifen GSE123284.SMARCB1.MCF-7_4-hydroxytamoxifen 206 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 244 bp overlap
SRF 1 dataset
Motif DE_48h DE_48h-SRF_MA0083.3 16 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 128 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
ChIP MCF-7 GSE133072.TRPS1.MCF-7 201 bp overlap
ZNF189 1 dataset
ChIP HEK293 ENCSR163RYW.ZNF189.HEK293 385 bp overlap
ZNF341 3 datasets
ChIP HEK293 ENCFF944VMC 138 bp overlap
ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 268 bp overlap
ChIP HEK293 GSE76494.ZNF341.HEK293 155 bp overlap
ZNF416 1 dataset
Motif DE_48h DE_48h-ZNF416_MA1979.2 10 bp overlap
ZNF418 1 dataset
Motif DE_48h DE_48h-ZNF418_MA1980.1 15 bp overlap
ZNF675 1 dataset
Motif DE_48h DE_48h-ZNF675_MA1714.2 19 bp overlap
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