Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 432 bp overlap

BRD4 4 datasets

ChIP HAP1 GSE108387.BRD4.HAP1 354 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 454 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 535 bp overlap

ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 238 bp overlap

CTCF 1 dataset

ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 255 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF031ISE 248 bp overlap

ERG 1 dataset

ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 161 bp overlap

EZH2 1 dataset

ChIP THP-1 GSE135024.EZH2.THP-1 509 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 156 bp overlap

FOXP1 1 dataset

ChIP H9 GSE31006.FOXP1.H9 162 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 226 bp overlap

ChIP DE DE-GATA4-2 295 bp overlap

GATA6 6 datasets

ChIP DE DE-GATA6-1 235 bp overlap

ChIP DE DE-GATA6-2 287 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 204 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 185 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 257 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 240 bp overlap

HDAC2 2 datasets

ChIP RH4_DMSO-6H GSE116344.HDAC2.RH4_DMSO-6H 242 bp overlap

ChIP RH4_Entinostat-6H GSE116344.HDAC2.RH4_Entinostat-6H 236 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 306 bp overlap

IRF4 2 datasets

ChIP BC-3 GSE132777.IRF4.BC-3 177 bp overlap

ChIP OCI-Ly3_SHCTR GSE56857.IRF4.OCI-Ly3_SHCTR 188 bp overlap

JARID2 1 dataset

ChIP MRC-5_IPS25_CTR GSE48515.JARID2.MRC-5_IPS25_CTR 195 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 323 bp overlap

MED1 2 datasets

ChIP RH4 GSE83726.MED1.RH4 173 bp overlap

ChIP hESC_PRIMED GSE69646.MED1.hESC_PRIMED 357 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 535 bp overlap

NANOG 5 datasets

ChIP H1 ENCFF747ZPQ 202 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 168 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 535 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 249 bp overlap

ChIP hESC GSE18292.NANOG.hESC 140 bp overlap

PAX3-FOXO1 2 datasets

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 367 bp overlap

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 233 bp overlap

POU5F1 2 datasets

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 535 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 258 bp overlap

PRDM14 1 dataset

ChIP primordial-germ-cell-like-cell GSE138674.PRDM14.primordial-germ-cell-like-cell 158 bp overlap

RAD21 4 datasets

ChIP HAP1 GSE152721.RAD21.HAP1 404 bp overlap

ChIP HAP1 GSE126634.RAD21.HAP1 535 bp overlap

ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 535 bp overlap

ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 86 bp overlap

RARA 1 dataset

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 197 bp overlap

RBBP4 3 datasets

ChIP RH5 GSE155861.RBBP4.RH5 201 bp overlap

ChIP RH5 GSE155861.RBBP4.RH5 120 bp overlap

ChIP SCMC GSE155861.RBBP4.SCMC 429 bp overlap

RELA 1 dataset

ChIP KB_IL GSE52469.RELA.KB_IL 111 bp overlap

RELB 1 dataset

ChIP GM12878 ENCSR387QUV.RELB.GM12878 245 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 319 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 223 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 199 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 215 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 140 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 341 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 103 bp overlap

SOX8 1 dataset

ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 335 bp overlap

SPIB 1 dataset

ChIP OCI-Ly3_SHCTR GSE56857.SPIB.OCI-Ly3_SHCTR 190 bp overlap

TFAP2C 2 datasets

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 470 bp overlap

ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 535 bp overlap

TP53 1 dataset

ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 247 bp overlap

YY1 2 datasets

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 179 bp overlap

ChIP RH4_DMSO-6H GSE116344.YY1.RH4_DMSO-6H 198 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 234 bp overlap

ZNF766 1 dataset

ChIP HEK293T GSE78099.ZNF766.HEK293T 111 bp overlap

Genome Browser