chr6 : 158,161,979 – 158,162,102
123 bp 42 TFs 2 linked genes
This 123 bp open chromatin element is linked to SERAC1 and GTF2H5 and is bound by 42 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
SERAC1 6.2 kb Proximal Proximity
GTF2H5 6.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr6:158,156,979 – 158,167,102
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
ASH2L 2 datasets
ChIP H1 ENCFF399KAM 123 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 107 bp overlap
BRD4 2 datasets
ChIP COLO-320 GSE73319.BRD4.COLO-320 123 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 119 bp overlap
CTCF 45 datasets
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
ChIP H1 ENCFF230QSV 123 bp overlap
ChIP H9 ENCFF152GTF 123 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 123 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 111 bp overlap
ChIP HEK293 ENCFF498RMM 123 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 116 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 123 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 74 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 123 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 116 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 100 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 116 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 81 bp overlap
ChIP Peyer's patch ENCFF828IDE 123 bp overlap
ChIP Peyers-patch ENCSR799WDT.CTCF.Peyers-patch 123 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 123 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 123 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 123 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 123 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 123 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 123 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 123 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 100 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 123 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-7h-Flavo-3h 99 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 123 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 97 bp overlap
ChIP colon_transverse ENCSR833FWC.CTCF.colon_transverse 123 bp overlap
ChIP colon_transverse ENCSR769WKR.CTCF.colon_transverse 123 bp overlap
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 123 bp overlap
ChIP endodermal cell ENCFF471YCZ 123 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 123 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 123 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 123 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 123 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 123 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 123 bp overlap
ChIP left lung ENCFF620MAT 123 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 123 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 123 bp overlap
ChIP spleen ENCSR601FEB.CTCF.spleen 123 bp overlap
ChIP spleen ENCSR595BPR.CTCF.spleen 123 bp overlap
ChIP thoracic-aorta ENCSR549TXG.CTCF.thoracic-aorta 123 bp overlap
ChIP transverse colon ENCFF471AZS 123 bp overlap
EGR1 6 datasets
ChIP HCT-116 ENCSR000BRZ.EGR1.HCT-116 123 bp overlap
ChIP HL-60_PMA GSE106359.EGR1.HL-60_PMA 123 bp overlap
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 120 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 115 bp overlap
ChIP K562 ENCFF006PJY 123 bp overlap
ChIP fibroblast_DOX-24h GSE134924.EGR1.fibroblast_DOX-24h 123 bp overlap
ESR1 1 dataset
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 121 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 123 bp overlap
INTS13 1 dataset
ChIP monocyte GSE106359.INTS13.monocyte 123 bp overlap
KDM1A 1 dataset
ChIP Kasumi-1_GSK690 GSE71739.KDM1A.Kasumi-1_GSK690 65 bp overlap
KLF13 1 dataset
ChIP K562 ENCFF738YZC 123 bp overlap
KLF5 1 dataset
ChIP ESO-26 GSE132680.KLF5.ESO-26 123 bp overlap
KLF9 3 datasets
ChIP GBM1A GSE62211.KLF9.GBM1A 108 bp overlap
ChIP MCF-7 ENCFF618FCM 123 bp overlap
ChIP MCF-7 ENCSR125ZYC.KLF9.MCF-7 123 bp overlap
MAX 4 datasets
ChIP NB4 ENCFF966MWB 123 bp overlap
ChIP NB4 ENCSR000EHS.MAX.NB4 99 bp overlap
ChIP P493-6_CMYC_1H GSE36354.MAX.P493-6_CMYC_1H 123 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 123 bp overlap
MXI1 3 datasets
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
ChIP IMR-90 ENCFF040YVH 123 bp overlap
ChIP IMR-90 ENCSR000EFE.MXI1.IMR-90 117 bp overlap
MYC 2 datasets
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 101 bp overlap
ChIP MCF-10A ENCSR000DOS.MYC.MCF-10A 110 bp overlap
MYCN 1 dataset
ChIP SHEP-21N GSE80151.MYCN.SHEP-21N 112 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 123 bp overlap
NFKB2 1 dataset
Motif DE_12h DE_12h-NFKB2_MA0778.2 11 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 112 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 96 bp overlap
RAD21 7 datasets
ChIP K-562 ENCSR000BKV.RAD21.K-562 87 bp overlap
ChIP THP-1_PMA_Dex-6h GSE103477.RAD21.THP-1_PMA_Dex-6h 123 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 123 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 123 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 122 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 123 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 123 bp overlap
RARA 2 datasets
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
ChIP U-937_ATRA-treated_RAR GSE98006.RARA.U-937_ATRA-treated_RAR 123 bp overlap
RARA::RXRA 1 dataset
Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap
RARA::RXRG 1 dataset
Motif DE_12h DE_12h-RARARXRG_MA1149.2 17 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 123 bp overlap
RELA 3 datasets
ChIP CD4_Th1_DMSO GSE62482.RELA.CD4_Th1_DMSO 112 bp overlap
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 123 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 123 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
SP1 1 dataset
ChIP H1 ENCFF263FUH 123 bp overlap
SPI1 2 datasets
ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 123 bp overlap
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 123 bp overlap
SPIC 1 dataset
Motif DE_12h DE_12h-SPIC_MA0687.2 13 bp overlap
STAT3 1 dataset
ChIP monocyte_IFNg-LPS GSE120943.STAT3.monocyte_IFNg-LPS 123 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 123 bp overlap
THRA 1 dataset
Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap
TP53 1 dataset
ChIP hESC_DIFF GSE39912.TP53.hESC_DIFF 98 bp overlap
TP63 2 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 123 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 123 bp overlap
TP73 1 dataset
Motif DE_12h DE_12h-TP73_MA0861.2 16 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 123 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 123 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 123 bp overlap
ZFP14 1 dataset
Motif DE_12h DE_12h-ZFP14_MA1972.1 15 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 110 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 123 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 63 bp overlap
ZNF35 1 dataset
ChIP HEK293 GSE76494.ZNF35.HEK293 60 bp overlap
ZNF554 1 dataset
ChIP HEK293 GSE76494.ZNF554.HEK293 123 bp overlap
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