chr6 : 72,438,366 – 72,438,877

511 bp 56 TFs 0 linked genes

This 511 bp open chromatin element has no linked target genes and is bound by 56 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

56 transcription factors

CBFA2T3 1 dataset

ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 193 bp overlap

Crx 2 datasets

Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap

Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap

DMRTA1 1 dataset

Motif DE_60h DE_60h-DMRTA1_MA1707.2 10 bp overlap

DMRTA2 1 dataset

Motif DE_60h DE_60h-DMRTA2_MA1478.2 6 bp overlap

DUX4 2 datasets

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

Ddit3::Cebpa 2 datasets

Motif DE_48h DE_48h-Ddit3Cebpa_MA0019.2 10 bp overlap

Motif DE_60h DE_60h-Ddit3Cebpa_MA0019.2 10 bp overlap

E2F7 1 dataset

Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap

EOMES 2 datasets

Motif DE_60h DE_60h-EOMES_MA0800.2 9 bp overlap

ChIP hESC GSE26097.EOMES.hESC 349 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 511 bp overlap

ChIP DE DE-FOXA2-2 452 bp overlap

FOXD2 1 dataset

Motif DE_60h DE_60h-FOXD2_MA0847.4 11 bp overlap

FOXP2 1 dataset

Motif DE_60h DE_60h-FOXP2_MA0593.2 9 bp overlap

Foxq1 2 datasets

Motif DE_48h DE_48h-Foxq1_MA0040.2 10 bp overlap

Motif DE_60h DE_60h-Foxq1_MA0040.2 10 bp overlap

GATA1 1 dataset

ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 474 bp overlap

ChIP DE DE-GATA4-2 422 bp overlap

Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap

Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap

GATA6 4 datasets

ChIP DE DE-GATA6-1 420 bp overlap

ChIP DE DE-GATA6-2 426 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 404 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 336 bp overlap

GSC 2 datasets

Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap

Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap

GSC2 2 datasets

Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap

Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap

Gli1 1 dataset

Motif DE_60h DE_60h-Gli1_MA1990.2 10 bp overlap

Gli2 1 dataset

Motif DE_60h DE_60h-Gli2_MA0734.4 9 bp overlap

HNF4A 1 dataset

Motif DE_60h DE_60h-HNF4A_MA1494.2 14 bp overlap

MGA 1 dataset

Motif DE_60h DE_60h-MGA_MA0801.1 8 bp overlap

MYB 2 datasets

Motif DE_48h DE_48h-MYB_MA0100.4 6 bp overlap

Motif DE_60h DE_60h-MYB_MA0100.4 6 bp overlap

NFATC3 1 dataset

Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap

NRL 1 dataset

Motif DE_60h DE_60h-NRL_MA0842.3 12 bp overlap

Nanog 2 datasets

Motif DE_48h DE_48h-Nanog_MA2339.1 7 bp overlap

Motif DE_60h DE_60h-Nanog_MA2339.1 7 bp overlap

Nfatc1 1 dataset

Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap

OTX1 2 datasets

Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap

Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap

PITX1 2 datasets

Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap

Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap

PITX3 2 datasets

Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap

Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap

PKNOX1 1 dataset

ChIP K562 ENCFF236IUS 179 bp overlap

POU4F2 2 datasets

Motif DE_48h DE_48h-POU4F2_MA0683.2 15 bp overlap

Motif DE_60h DE_60h-POU4F2_MA0683.2 15 bp overlap

Pgr 1 dataset

Motif DE_60h DE_60h-Pgr_MA2323.1 17 bp overlap

RBPJ 2 datasets

Motif DE_48h DE_48h-RBPJ_MA1116.2 6 bp overlap

Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap

RHOXF1 2 datasets

Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap

Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap

Rarb 1 dataset

Motif DE_60h DE_60h-Rarb_MA0857.1 16 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 308 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 274 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 156 bp overlap

SOX13 1 dataset

Motif DE_60h DE_60h-SOX13_MA1120.2 7 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 403 bp overlap

SOX2 1 dataset

Motif DE_60h DE_60h-SOX2_MA0143.5 7 bp overlap

SOX9 1 dataset

Motif DE_60h DE_60h-SOX9_MA0077.2 8 bp overlap

Sox3 1 dataset

Motif DE_60h DE_60h-Sox3_MA0514.3 7 bp overlap

TAL1 2 datasets

ChIP K-562 GSE107726.TAL1.K-562 167 bp overlap

ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 159 bp overlap

TBR1 1 dataset

Motif DE_60h DE_60h-TBR1_MA0802.2 9 bp overlap

TBX1 1 dataset

Motif DE_60h DE_60h-TBX1_MA0805.1 8 bp overlap

TBX15 1 dataset

Motif DE_60h DE_60h-TBX15_MA0803.1 8 bp overlap

TBX19 1 dataset

Motif DE_60h DE_60h-TBX19_MA0804.2 17 bp overlap

TBX2 1 dataset

Motif DE_60h DE_60h-TBX2_MA0688.2 9 bp overlap

TBX20 1 dataset

Motif DE_60h DE_60h-TBX20_MA0689.1 11 bp overlap

TBX3 1 dataset

Motif DE_60h DE_60h-TBX3_MA1566.3 9 bp overlap

TBX4 1 dataset

Motif DE_60h DE_60h-TBX4_MA0806.1 8 bp overlap

TBX5 1 dataset

Motif DE_60h DE_60h-TBX5_MA0807.1 8 bp overlap

TBXT 1 dataset

Motif DE_60h DE_60h-TBXT_MA0009.2 16 bp overlap

ZNF184 2 datasets

Motif DE_48h DE_48h-ZNF184_MA2120.1 13 bp overlap

Motif DE_60h DE_60h-ZNF184_MA2120.1 13 bp overlap

ZNF75D 3 datasets

Motif DE_48h DE_48h-ZNF75D_MA1601.2 12 bp overlap

Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap