chr5 : 167,561,430 167,562,180
750 bp 66 TFs 0 linked genes
This 750 bp open chromatin element has no linked target genes and is bound by 66 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:167,556,430 – 167,567,180
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
66 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_GFP_Ethanol GSE128883.AR.LNCaP_GFP_Ethanol 179 bp overlap
BACH1 1 dataset
Motif DE_12h DE_12h-BACH1_MA1633.2 9 bp overlap
BRD4 2 datasets
ChIP COLO-320 GSE73319.BRD4.COLO-320 665 bp overlap
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 190 bp overlap
CTCF 66 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 335 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 356 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 239 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 353 bp overlap
ChIP A673 ENCFF123WOM 441 bp overlap
ChIP C4-2B ENCFF821XVN 726 bp overlap
ChIP C4-2B ENCFF821XVN 526 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 166 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 338 bp overlap
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF772DML 155 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H54 ENCFF255TVO 225 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 163 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 162 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 167 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 275 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 234 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 169 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 169 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 225 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 225 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 227 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 202 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 189 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 181 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 163 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 175 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 130 bp overlap
ChIP LNCAP ENCFF223HIG 509 bp overlap
ChIP LNCAP ENCFF700QXT 517 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 264 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 181 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 181 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 411 bp overlap
ChIP MCF-7 ENCFF162GNE 245 bp overlap
ChIP MCF-7 ENCFF198DQX 231 bp overlap
ChIP MCF-7 ENCFF414SZG 191 bp overlap
ChIP MCF-7 ENCFF494VXA 231 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 166 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 188 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 118 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 149 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 171 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 184 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 235 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 118 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 94 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 360 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 117 bp overlap
ChIP T-47D_NaCl-isotonic GSE111923.CTCF.T-47D_NaCl-isotonic 285 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 199 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 92 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 196 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 207 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 123 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 183 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 156 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 170 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 171 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 260 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 152 bp overlap
DUX4 1 dataset
Motif DE_24h DE_24h-DUX4_MA0468.1 11 bp overlap
EOMES 2 datasets
Motif DE_24h DE_24h-EOMES_MA0800.2 9 bp overlap
ChIP hESC GSE26097.EOMES.hESC 238 bp overlap
EZH2 3 datasets
ChIP PC-9 ENCSR793USK.EZH2.PC-9 77 bp overlap
ChIP PC-9 ENCSR793USK.EZH2.PC-9 315 bp overlap
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 123 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 502 bp overlap
ChIP DE DE-FOXA2-2 486 bp overlap
FOXD2 1 dataset
Motif DE_24h DE_24h-FOXD2_MA0847.4 11 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 260 bp overlap
ChIP DE DE-GATA4-2 526 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 483 bp overlap
ChIP DE DE-GATA6-2 709 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 471 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 477 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 327 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 750 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 474 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 481 bp overlap
Gfi1B 1 dataset
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
IKZF1 1 dataset
Motif DE_24h DE_24h-IKZF1_MA1508.2 8 bp overlap
IRF3 1 dataset
Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap
IRF4 1 dataset
Motif DE_12h DE_12h-IRF4_MA1419.2 14 bp overlap
IRF5 1 dataset
Motif DE_12h DE_12h-IRF5_MA1420.1 14 bp overlap
IRF8 1 dataset
Motif DE_12h DE_12h-IRF8_MA0652.2 13 bp overlap
ISL2 1 dataset
Motif DE_12h DE_12h-ISL2_MA0914.2 6 bp overlap
Irf1 1 dataset
Motif DE_12h DE_12h-Irf1_MA0050.4 11 bp overlap
JUN 5 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 317 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 376 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 347 bp overlap
ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 181 bp overlap
ChIP MDA-MB-231 GSE112444.JUN.MDA-MB-231 184 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 103 bp overlap
NANOG 4 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 243 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 507 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
NFATC3 1 dataset
Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap
Nfat5 1 dataset
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Nfatc1 1 dataset
Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
RAD21 14 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 143 bp overlap
ChIP A549 ENCFF047SFC 251 bp overlap
ChIP H1 ENCFF698EWO 61 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 165 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 239 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 141 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 130 bp overlap
ChIP SK-N-SH ENCFF747MAS 251 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 164 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 348 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 332 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 167 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 138 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 100 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 534 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 290 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 277 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 426 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 84 bp overlap
SMARCC1 3 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 511 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 508 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 157 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 118 bp overlap
STAG1 3 datasets
ChIP HeLa GSE126990.STAG1.HeLa 315 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 315 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 140 bp overlap
SUZ12 1 dataset
ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 149 bp overlap
Stat2 1 dataset
Motif DE_12h DE_12h-Stat2_MA1623.2 10 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 189 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 481 bp overlap
TBR1 1 dataset
Motif DE_24h DE_24h-TBR1_MA0802.2 9 bp overlap
TBX18 1 dataset
Motif DE_24h DE_24h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_24h DE_24h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_24h DE_24h-TBX20_MA0689.1 11 bp overlap
TBX3 1 dataset
Motif DE_24h DE_24h-TBX3_MA1566.3 9 bp overlap
Tbx6 1 dataset
Motif DE_24h DE_24h-Tbx6_MA1567.3 9 bp overlap
ZNF263 1 dataset
ChIP HEK293 ENCFF336CWQ 358 bp overlap
ZNF449 1 dataset
Motif DE_12h DE_12h-ZNF449_MA1656.2 10 bp overlap
ZNF708 1 dataset
Motif DE_12h DE_12h-ZNF708_MA1730.2 9 bp overlap
ZNF768 1 dataset
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Zfp809 1 dataset
Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap
Zic2 1 dataset
Motif DE_24h DE_24h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_24h DE_24h-Zic3_MA0697.3 7 bp overlap