chr5 : 78,972,006 78,972,395
389 bp 37 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 37 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:78,967,006 – 78,977,395
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
37 transcription factors
Source
Cell type
BRD3 2 datasets
ChIP HEK293T GSE39579.BRD3.HEK293T 193 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 148 bp overlap
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 74 bp overlap
E2F6 4 datasets
ChIP H1 ENCFF785DWK 385 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 169 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 103 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 181 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 199 bp overlap
ChIP DE DE-FOXA2-2 268 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 243 bp overlap
ChIP foregut GSE117136.GATA4.foregut 71 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 199 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-2 389 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 66 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 125 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 272 bp overlap
HNF4A 4 datasets
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 220 bp overlap
ChIP GP5D_SIRAD21 GSE51234.HNF4A.GP5D_SIRAD21 181 bp overlap
ChIP HCT-116 GSE62890.HNF4A.HCT-116 313 bp overlap
ChIP IM95 GSE114018.HNF4A.IM95 148 bp overlap
JUND 1 dataset
ChIP Kasumi-1_ctrl GSE117105.JUND.Kasumi-1_ctrl 121 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 264 bp overlap
KLF17 2 datasets
ChIP HEK293 ENCFF658MHR 107 bp overlap
ChIP HEK293 ENCSR065WUF.KLF17.HEK293 144 bp overlap
MAX 1 dataset
ChIP Hep-G2 ENCSR000BTM.MAX.Hep-G2 116 bp overlap
MED1 1 dataset
ChIP HUVEC-C_siCTL GSE124892.MED1.HUVEC-C_siCTL 186 bp overlap
NFYB 2 datasets
ChIP K-562 ENCSR000EGQ.NFYB.K-562 223 bp overlap
ChIP K562 ENCFF709RXX 295 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 62 bp overlap
POLR2A 2 datasets
ChIP HepG2 ENCFF422YUC 370 bp overlap
ChIP HepG2 ENCFF422YUC 160 bp overlap
POU2F2 1 dataset
ChIP HNPC_UNDIF GSE74814.POU2F2.HNPC_UNDIF 176 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 147 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 105 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 95 bp overlap
RBFOX2 1 dataset
ChIP HepG2 ENCFF939HTZ 366 bp overlap
RBM22 3 datasets
ChIP HepG2 ENCFF292RVQ 187 bp overlap
ChIP HepG2 ENCFF561IAJ 117 bp overlap
ChIP HepG2 ENCFF561IAJ 208 bp overlap
SMARCA4 1 dataset
ChIP NPC_K755R-siAP GSE122631.SMARCA4.NPC_K755R-siAP 169 bp overlap
SNAI2 1 dataset
ChIP RD_shSNAI2 GSE137168.SNAI2.RD_shSNAI2 214 bp overlap
SREBP2 2 datasets
ChIP monocyte GSE129202.SREBP2.monocyte 249 bp overlap
ChIP monocyte_TNF GSE129202.SREBP2.monocyte_TNF 313 bp overlap
STAT3 1 dataset
ChIP HepaRG_sodium-oleate GSE89157.STAT3.HepaRG_sodium-oleate 110 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 154 bp overlap
WT1 1 dataset
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 68 bp overlap
ZBTB48 2 datasets
ChIP HEK293 ENCFF809BPK 226 bp overlap
ChIP HEK293 ENCSR781EQJ.ZBTB48.HEK293 203 bp overlap
ZFP36 1 dataset
ChIP K-562 ENCSR776CYN.ZFP36.K-562 180 bp overlap
ZNF16 2 datasets
ChIP HEK293 ENCFF231FLW 313 bp overlap
ChIP HEK293 ENCSR093HXE.ZNF16.HEK293 301 bp overlap
ZNF283 1 dataset
ChIP HEK293T GSE78099.ZNF283.HEK293T 180 bp overlap
ZNF664 1 dataset
ChIP HEK293 ENCFF343XSW 99 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 102 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 235 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 102 bp overlap