chr5 : 74,817,007 74,817,227
220 bp 63 TFs 0 linked genes
This 220 bp open chromatin element has no linked target genes and is bound by 63 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:74,812,007 – 74,822,227
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
63 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP HAP1 GSE108387.ARID1A.HAP1 163 bp overlap
BARX1 1 dataset
Motif DE_12h DE_12h-BARX1_MA0875.2 6 bp overlap
BSX 1 dataset
Motif DE_12h DE_12h-BSX_MA0876.2 6 bp overlap
Bcl11B 1 dataset
Motif DE_12h DE_12h-Bcl11B_MA1989.2 9 bp overlap
CBFB 1 dataset
ChIP WTC11 ENCFF113HIY 220 bp overlap
CBX8 1 dataset
ChIP K-562 ENCSR000ATW.CBX8.K-562 220 bp overlap
CHD7 4 datasets
ChIP H1 ENCFF126NLU 220 bp overlap
ChIP H1 ENCFF126NLU 220 bp overlap
ChIP WA01 ENCSR000AVA.CHD7.WA01 88 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 220 bp overlap
DLX1 1 dataset
Motif DE_12h DE_12h-DLX1_MA0879.3 6 bp overlap
DLX6 1 dataset
Motif DE_12h DE_12h-DLX6_MA0882.2 6 bp overlap
Dlx3 1 dataset
Motif DE_12h DE_12h-Dlx3_MA0880.2 6 bp overlap
Dlx4 1 dataset
Motif DE_12h DE_12h-Dlx4_MA0881.2 6 bp overlap
ELF3 3 datasets
ChIP PDAC GSE64557.ELF3.PDAC 220 bp overlap
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 220 bp overlap
ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 220 bp overlap
ETS1 2 datasets
ChIP GM23338 ENCFF701IZH 220 bp overlap
ChIP hESC ENCSR534VHI.ETS1.hESC 220 bp overlap
ETV6 1 dataset
ChIP WTC11 ENCFF812SCD 220 bp overlap
FLI1 2 datasets
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 220 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 220 bp overlap
FOXA1 5 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 220 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 220 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 163 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 218 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 192 bp overlap
FOXA2 2 datasets
ChIP BJ1-hTERT_CDT1 GSE92491.FOXA2.BJ1-hTERT_CDT1 93 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 220 bp overlap
FOXK1 1 dataset
ChIP WTC11 ENCFF875IGU 220 bp overlap
GATA2 2 datasets
ChIP TF1 GSE73207.GATA2.TF1 201 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 140 bp overlap
GATA4 1 dataset
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 76 bp overlap
GATA6 2 datasets
ChIP DE_D1 S14-DE-d1-GATA6-exp1 176 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 151 bp overlap
GBX2 1 dataset
Motif DE_12h DE_12h-GBX2_MA0890.2 6 bp overlap
HESX1 1 dataset
Motif DE_12h DE_12h-HESX1_MA0894.2 6 bp overlap
HIC2 1 dataset
Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap
HOXA7 1 dataset
Motif DE_12h DE_12h-HOXA7_MA1498.3 6 bp overlap
HOXB8 1 dataset
ChIP CFPAC-1_HOXB8-OE GSE119930.HOXB8.CFPAC-1_HOXB8-OE 220 bp overlap
Hmx1 1 dataset
Motif DE_12h DE_12h-Hmx1_MA0896.2 9 bp overlap
Hmx3 1 dataset
Motif DE_12h DE_12h-Hmx3_MA0898.2 9 bp overlap
JUN 4 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 220 bp overlap
ChIP ESC S24-ESC-d0-JUN-exp1 144 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 173 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 192 bp overlap
LBX2 1 dataset
Motif DE_12h DE_12h-LBX2_MA0699.2 6 bp overlap
LHX2 1 dataset
Motif DE_12h DE_12h-LHX2_MA0700.3 6 bp overlap
MORC2 1 dataset
ChIP H9 GSE95374.MORC2.H9 186 bp overlap
MSX1 1 dataset
Motif DE_12h DE_12h-MSX1_MA0666.3 6 bp overlap
MSX2 1 dataset
Motif DE_12h DE_12h-MSX2_MA0708.3 6 bp overlap
Msx3 1 dataset
Motif DE_12h DE_12h-Msx3_MA0709.2 6 bp overlap
NANOG 8 datasets
ChIP GM23338 ENCFF065NZG 220 bp overlap
ChIP GM23338 ENCSR061DGF.NANOG.GM23338 220 bp overlap
ChIP HUES-8 GSE109524.NANOG.HUES-8 220 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 220 bp overlap
ChIP WA01 ENCSR000BMT.NANOG.WA01 122 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 220 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 220 bp overlap
ChIP hESC GSE18292.NANOG.hESC 173 bp overlap
Nobox 1 dataset
Motif DE_12h DE_12h-Nobox_MA0125.2 6 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 220 bp overlap
POU3F1 1 dataset
Motif DE_12h DE_12h-POU3F1_MA0786.2 10 bp overlap
POU3F2 1 dataset
Motif DE_12h DE_12h-POU3F2_MA0787.1 12 bp overlap
POU3F3 1 dataset
Motif DE_12h DE_12h-POU3F3_MA0788.1 13 bp overlap
POU5F1 16 datasets
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 108 bp overlap
ChIP GM23338 ENCFF333SNB 220 bp overlap
ChIP HUES-8 GSE109524.POU5F1.HUES-8 220 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 220 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 220 bp overlap
ChIP OSK GSE81899.POU5F1.OSK 196 bp overlap
ChIP OSKM GSE81899.POU5F1.OSKM 220 bp overlap
ChIP OSvK GSE81899.POU5F1.OSvK 211 bp overlap
ChIP OSvKM GSE81899.POU5F1.OSvKM 220 bp overlap
ChIP WA09 GSE105028.POU5F1.WA09 220 bp overlap
ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 220 bp overlap
ChIP hESC ENCSR264RJX.POU5F1.hESC 220 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 220 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 220 bp overlap
ChIP hiPSC GSE56567.POU5F1.hiPSC 219 bp overlap
ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 199 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 220 bp overlap
RAX 1 dataset
Motif DE_12h DE_12h-RAX_MA0718.2 6 bp overlap
RELA 1 dataset
ChIP Detroit-562_TNFa GSE91018.RELA.Detroit-562_TNFa 212 bp overlap
RUNX2 2 datasets
Motif DE_12h DE_12h-RUNX2_MA0511.2 9 bp overlap
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 220 bp overlap
RUNX3 1 dataset
Motif DE_12h DE_12h-RUNX3_MA0684.3 8 bp overlap
Runx1 1 dataset
Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap
SALL3 1 dataset
ChIP hiPSC GSE104863.SALL3.hiPSC 219 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 119 bp overlap
SMARCA4 2 datasets
ChIP hiPSC GSE124903.SMARCA4.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 220 bp overlap
SMARCB1 2 datasets
ChIP hiPSC GSE124903.SMARCB1.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 220 bp overlap
SMARCC1 5 datasets
ChIP DE_D1 S10-DE-d1-BAF155-exp1 81 bp overlap
ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 193 bp overlap
ChIP SK-N-MC_shGFP GSE94275.SMARCC1.SK-N-MC_shGFP 81 bp overlap
ChIP hiPSC GSE124903.SMARCC1.hiPSC 220 bp overlap
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 220 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 176 bp overlap
ChIP OSK GSE81899.SOX2.OSK 209 bp overlap
ChIP OSKM GSE81899.SOX2.OSKM 202 bp overlap
ChIP hESC GSE18292.SOX2.hESC 170 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 220 bp overlap
SP1 1 dataset
ChIP WTC11 ENCFF688PEU 220 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 207 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap
ZNF207 1 dataset
ChIP WA09 GSE118632.ZNF207.WA09 220 bp overlap
ZNF384 1 dataset
Motif DE_12h DE_12h-ZNF384_MA1125.2 8 bp overlap
ZNF558 1 dataset
Motif DE_12h DE_12h-ZNF558_MA2335.1 29 bp overlap