chr4 : 163,493,027 163,493,317
290 bp 39 TFs 1 linked gene
This 290 bp open chromatin element is linked to TMA16 and is bound by 39 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
TMA16 1.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:163,488,027 – 163,498,317
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
39 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 88 bp overlap
ChIP CLL_patient3 GSE109411.BRD4.CLL_patient3 290 bp overlap
ChIP SEM GSE83671.BRD4.SEM 53 bp overlap
CC2D1A 2 datasets
ChIP K-562 ENCSR343IFJ.CC2D1A.K-562 214 bp overlap
ChIP K562 ENCFF567XUT 290 bp overlap
E2F1 1 dataset
ChIP MDA-MB-231 GSE95303.E2F1.MDA-MB-231 58 bp overlap
E4F1 1 dataset
ChIP K-562 ENCSR731LHZ.E4F1.K-562 148 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 234 bp overlap
EZH2 1 dataset
ChIP Jurkat_KO GSE147198.EZH2.Jurkat_KO 233 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 290 bp overlap
FOXM1 2 datasets
ChIP K-562 ENCSR429QPP.FOXM1.K-562 264 bp overlap
ChIP K562 ENCFF255RHV 211 bp overlap
HSF1 3 datasets
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 290 bp overlap
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 290 bp overlap
ChIP MO91 GSE45852.HSF1.MO91 176 bp overlap
IRF1 2 datasets
ChIP K-562 ENCSR854MCV.IRF1.K-562 290 bp overlap
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 242 bp overlap
IRF2 2 datasets
ChIP K-562 ENCSR376WCJ.IRF2.K-562 206 bp overlap
ChIP K562 ENCFF248LJZ 290 bp overlap
MED26 2 datasets
ChIP HCT-116 GSE121355.MED26.HCT-116 290 bp overlap
ChIP HCT-116_aux GSE121355.MED26.HCT-116_aux 290 bp overlap
MTA3 1 dataset
ChIP K-562 ENCSR180NCY.MTA3.K-562 188 bp overlap
MXI1 1 dataset
ChIP GM12878 ENCFF666NJR 74 bp overlap
MYB 8 datasets
ChIP CD4_Th1 GSE72266.MYB.CD4_Th1 203 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 275 bp overlap
ChIP Loucy GSE94000.MYB.Loucy 290 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 217 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 181 bp overlap
ChIP SEM GSE117864.MYB.SEM 230 bp overlap
ChIP THP-1 GSE90769.MYB.THP-1 242 bp overlap
ChIP THP-1_OG86 GSE90769.MYB.THP-1_OG86 231 bp overlap
MYBL2 2 datasets
ChIP K-562 ENCSR162IEM.MYBL2.K-562 290 bp overlap
ChIP K562 ENCFF299JBQ 229 bp overlap
NELFA 1 dataset
ChIP K-562_HS GSE112379.NELFA.K-562_HS 290 bp overlap
NELFE 2 datasets
ChIP HCT-116 GSE132705.NELFE.HCT-116 153 bp overlap
ChIP HCT-116_KAP1-KO GSE132705.NELFE.HCT-116_KAP1-KO 81 bp overlap
NEUROD1 1 dataset
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 187 bp overlap
NFYB 1 dataset
ChIP GM12878 ENCFF474DNH 290 bp overlap
NIPBL 1 dataset
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.NIPBL.HCT-116_RAD21-mAC_500uM_auxin 193 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 284 bp overlap
PHIP 2 datasets
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 108 bp overlap
ChIP HCT-116_ab833 GSE101646.PHIP.HCT-116_ab833 121 bp overlap
POLR2A 12 datasets
ChIP GM12878 ENCFF263VRI 268 bp overlap
ChIP GM12878 ENCFF412KAE 290 bp overlap
ChIP GM12878 ENCFF412KAE 288 bp overlap
ChIP GM12891 ENCFF379FCI 290 bp overlap
ChIP HCT116 ENCFF508RDJ 178 bp overlap
ChIP HCT116 ENCFF849NGT 241 bp overlap
ChIP HepG2 ENCFF350RIU 193 bp overlap
ChIP K562 ENCFF215CWW 174 bp overlap
ChIP K562 ENCFF262YXJ 279 bp overlap
ChIP K562 ENCFF757TUO 247 bp overlap
ChIP K562 ENCFF836GHX 114 bp overlap
ChIP SK-N-MC ENCFF088IVG 99 bp overlap
RBFOX2 2 datasets
ChIP K-562 GSE120104.RBFOX2.K-562 290 bp overlap
ChIP K-562 ENCSR822LBD.RBFOX2.K-562 290 bp overlap
RUNX1 1 dataset
ChIP NALM-6 GSE126300.RUNX1.NALM-6 214 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 123 bp overlap
SMAD3 1 dataset
ChIP breast-cancer_triple-negative GSE130364.SMAD3.breast-cancer_triple-negative 164 bp overlap
SUPT5H 4 datasets
ChIP HCT-116_DMSO GSE138548.SUPT5H.HCT-116_DMSO 149 bp overlap
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 290 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 90 bp overlap
ChIP K562 ENCFF902PAW 119 bp overlap
TAF1 1 dataset
ChIP WA01 ENCSR000BHO.TAF1.WA01 140 bp overlap
TAF3 1 dataset
ChIP HCT-116 GSE43539.TAF3.HCT-116 207 bp overlap
TBP 7 datasets
ChIP H1 ENCFF859IIO 250 bp overlap
ChIP K-562 ENCSR000EHA.TBP.K-562 151 bp overlap
ChIP K562 ENCFF901UYM 290 bp overlap
ChIP hESC GSE122298.TBP.hESC 217 bp overlap
ChIP hESC_10h GSE122298.TBP.hESC_10h 173 bp overlap
ChIP hESC_2h GSE122298.TBP.hESC_2h 161 bp overlap
ChIP hESC_8h GSE122298.TBP.hESC_8h 196 bp overlap
VEZF1 2 datasets
ChIP K-562 ENCSR189YMA.VEZF1.K-562 179 bp overlap
ChIP K562 ENCFF053XDV 290 bp overlap
YY1 1 dataset
ChIP HCT-116 ENCSR000BNX.YY1.HCT-116 177 bp overlap
ZBTB24 1 dataset
ChIP HCT-116 GSE111683.ZBTB24.HCT-116 140 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 231 bp overlap
ZNF20 1 dataset
ChIP HepG2 ENCFF518BKZ 290 bp overlap
ZNF395 1 dataset
ChIP K562 ENCFF464EIT 290 bp overlap