chr4 : 138,560,521 138,560,737
216 bp 34 TFs 1 linked gene
This 216 bp open chromatin element is linked to ENSG00000248795 and is bound by 34 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
ENSG00000248795 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:138,555,521 – 138,565,737
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
AR 1 dataset
ChIP MDA-MB-453_FOXA1 ERP003503.AR.MDA-MB-453_FOXA1 196 bp overlap
BRD2 1 dataset
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 116 bp overlap
BRD4 1 dataset
ChIP hESC GSE33281.BRD4.hESC 76 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 200 bp overlap
CTCF 95 datasets
ChIP BC-3 GSE135740.CTCF.BC-3 209 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 176 bp overlap
ChIP GM12878 ENCFF511URZ 166 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 191 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 143 bp overlap
ChIP GM23338 ENCFF531QOI 216 bp overlap
ChIP GM23338 ENCFF772DML 180 bp overlap
ChIP H1 ENCFF230QSV 149 bp overlap
ChIP H1 ENCFF414GZI 189 bp overlap
ChIP H1 ENCFF764RHO 143 bp overlap
ChIP H9 ENCFF152GTF 208 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 170 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 152 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 155 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 134 bp overlap
ChIP HepG2 ENCFF127KUP 197 bp overlap
ChIP HepG2 ENCFF348BUL 182 bp overlap
ChIP HepG2 ENCFF757EKU 216 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 216 bp overlap
ChIP Jurkat_DMSO GSE130140.CTCF.Jurkat_DMSO 103 bp overlap
ChIP Jurkat_GSI3d GSE130140.CTCF.Jurkat_GSI3d 155 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 192 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 213 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 193 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 216 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 149 bp overlap
ChIP K-562 ENCSR000EGM.CTCF.K-562 157 bp overlap
ChIP K-562 GSE110681.CTCF.K-562 128 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 120 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 83 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 216 bp overlap
ChIP K-562_MonoN GSE137216.CTCF.K-562_MonoN 153 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 216 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 171 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 173 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 216 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 167 bp overlap
ChIP K-562_sgGal4 GSE132212.CTCF.K-562_sgGal4 175 bp overlap
ChIP K562 ENCFF082GOI 52 bp overlap
ChIP K562 ENCFF111MGE 193 bp overlap
ChIP K562 ENCFF400DFR 191 bp overlap
ChIP K562 ENCFF430KTH 139 bp overlap
ChIP MCF-7 ENCFF139NQI 181 bp overlap
ChIP MCF-7 ENCFF162GNE 63 bp overlap
ChIP MCF-7 ENCFF198DQX 210 bp overlap
ChIP MCF-7 ENCFF414SZG 176 bp overlap
ChIP MCF-7 ENCFF424NQR 58 bp overlap
ChIP MCF-7 ENCFF494VXA 194 bp overlap
ChIP MCF-7 ENCFF844STM 71 bp overlap
ChIP MCF-7 ENCFF954TUV 167 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 189 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 203 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 147 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 120 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 139 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 127 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 105 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 195 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 133 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 215 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 175 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 113 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 112 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 216 bp overlap
ChIP NCI-H929 ENCFF305JAB 216 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 216 bp overlap
ChIP OCI-LY1 ENCFF455ESK 144 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 216 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 137 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 133 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 186 bp overlap
ChIP WTC11 ENCFF658QVH 216 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 216 bp overlap
ChIP endodermal cell ENCFF471YCZ 201 bp overlap
ChIP endothelial cell of umbilical vein ENCFF947JAB 216 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 215 bp overlap
ChIP erythroblast_adult_erythroblasts GSE102184.CTCF.erythroblast_adult_erythroblasts 140 bp overlap
ChIP erythroid_Don001 GSE137982.CTCF.erythroid_Don001 168 bp overlap
ChIP fetal_erythroblasts GSE102184.CTCF.fetal_erythroblasts 148 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 216 bp overlap
ChIP hESC GSE20650.CTCF.hESC 124 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 134 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 216 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 148 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 216 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 121 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 130 bp overlap
ChIP neural progenitor cell ENCFF420RBO 216 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 185 bp overlap
ChIP placenta ENCFF029PHY 169 bp overlap
ChIP right lobe of liver ENCFF250KSY 216 bp overlap
ChIP testis ENCFF128XQJ 216 bp overlap
ChIP testis ENCFF409BGH 207 bp overlap
ChIP testis ENCSR981CID.CTCF.testis 139 bp overlap
CTCFL 1 dataset
ChIP K-562 GSE70764.CTCFL.K-562 146 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF364PUR 99 bp overlap
ChIP BLaER1 ENCFF798NMV 87 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 216 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 196 bp overlap
ELF1 10 datasets
ChIP GM12878 ENCFF432UGA 216 bp overlap
ChIP GM12878 ENCSR000BMB.ELF1.GM12878 216 bp overlap
ChIP Hep-G2 ENCSR000BMZ.ELF1.Hep-G2 145 bp overlap
ChIP HepG2 ENCFF838BCU 216 bp overlap
ChIP K-562 ENCSR000BMD.ELF1.K-562 216 bp overlap
ChIP K-562 ENCSR502OEK.ELF1.K-562 216 bp overlap
ChIP K562 ENCFF457KVR 216 bp overlap
ChIP K562 ENCFF496AKI 189 bp overlap
ChIP MCF-7 ENCFF687CWI 106 bp overlap
ChIP MCF-7 ENCSR000BSS.ELF1.MCF-7 216 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 177 bp overlap
ESR1 9 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 210 bp overlap
ChIP MCF-7 GSE119057.ESR1.MCF-7 170 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 172 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 169 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 160 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 169 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 163 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 175 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 167 bp overlap
FLI1 1 dataset
ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 210 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 216 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 104 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 97 bp overlap
ISL2 1 dataset
Motif ES_0h ES_0h-ISL2_MA0914.2 6 bp overlap
MAX 1 dataset
ChIP H1 ENCFF914VQY 216 bp overlap
NCOR1 1 dataset
ChIP HEK293T_SICTR GSE35197.NCOR1.HEK293T_SICTR 204 bp overlap
NRF1 8 datasets
ChIP H1 ENCFF582PEJ 189 bp overlap
ChIP K-562 ENCSR998AJK.NRF1.K-562 216 bp overlap
ChIP K-562 ENCSR837EYC.NRF1.K-562 202 bp overlap
ChIP K-562 ENCSR494TDU.NRF1.K-562 200 bp overlap
ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 100 bp overlap
ChIP K562 ENCFF130SGK 135 bp overlap
ChIP K562 ENCFF689EWI 216 bp overlap
ChIP K562 ENCFF791UHF 216 bp overlap
OGG1 2 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 216 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 216 bp overlap
POU5F1 2 datasets
ChIP BG03 GSE21614.POU5F1.BG03 200 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 216 bp overlap
RAD21 17 datasets
ChIP GM12878 ENCSR000BMY.RAD21.GM12878 135 bp overlap
ChIP H1 ENCFF698EWO 152 bp overlap
ChIP H1 ENCFF967OJF 199 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 122 bp overlap
ChIP HepG2 ENCFF360ZSW 181 bp overlap
ChIP HepG2 ENCFF906QIS 164 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 149 bp overlap
ChIP K562 ENCFF066JWO 216 bp overlap
ChIP K562 ENCFF169SQI 157 bp overlap
ChIP K562 ENCFF192VNH 161 bp overlap
ChIP K562 ENCFF634XYR 176 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 114 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 132 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 128 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 195 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 186 bp overlap
ChIP liver ENCFF522JHE 216 bp overlap
REST 2 datasets
ChIP K-562 ENCSR137ZMQ.REST.K-562 111 bp overlap
ChIP K562 ENCFF688UKW 216 bp overlap
SMAD2 1 dataset
Motif ES_0h ES_0h-SMAD2_MA1964.2 6 bp overlap
SMC1 2 datasets
ChIP DKO GSE131606.SMC1.DKO 216 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 216 bp overlap
SMC1A 3 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 158 bp overlap
ChIP MCF-7 GSE115602.SMC1A.MCF-7 135 bp overlap
ChIP MCF-7_EtOH GSE115602.SMC1A.MCF-7_EtOH 142 bp overlap
SMC3 2 datasets
ChIP K-562 ENCSR000EGW.SMC3.K-562 168 bp overlap
ChIP K562 ENCFF582XIX 212 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 155 bp overlap
TRIM25 1 dataset
ChIP BT-549 GSE79588.TRIM25.BT-549 175 bp overlap
ZBTB2 2 datasets
ChIP GM12878 GSE97661.ZBTB2.GM12878 137 bp overlap
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 157 bp overlap
ZBTB33 4 datasets
ChIP HepG2 ENCFF778UKV 153 bp overlap
ChIP K-562 ENCSR876GXA.ZBTB33.K-562 216 bp overlap
ChIP K562 ENCFF427SDV 216 bp overlap
ChIP K562 ENCFF875HLX 216 bp overlap
ZBTB48 1 dataset
ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 216 bp overlap
ZNF16 1 dataset
Motif ES_0h ES_0h-ZNF16_MA1654.2 21 bp overlap
ZNF416 1 dataset
Motif ES_0h ES_0h-ZNF416_MA1979.2 10 bp overlap