chr4 : 44,210,676 – 44,211,061
385 bp 59 TFs 0 linked genes
This 385 bp open chromatin element has no linked target genes and is bound by 59 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:44,205,676 – 44,216,061
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
59 transcription factors
Source
Cell type
ATF2 2 datasets
Motif DE_12h DE_12h-ATF2_MA1632.2 10 bp overlap
ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap
ATF3 1 dataset
ChIP WA01 ENCSR000BKC.ATF3.WA01 135 bp overlap
CEBPB 1 dataset
ChIP WA01 ENCSR000EBV.CEBPB.WA01 166 bp overlap
CREB1 1 dataset
Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap
CTCF 123 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 237 bp overlap
ChIP Caco-2 ENCFF934QYS 186 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 141 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 224 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 133 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 147 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 124 bp overlap
ChIP GM12873 ENCFF711LOS 240 bp overlap
ChIP GM23338 ENCFF531QOI 287 bp overlap
ChIP GM23338 ENCFF772DML 58 bp overlap
ChIP H1 ENCFF414GZI 215 bp overlap
ChIP H1 ENCFF764RHO 172 bp overlap
ChIP H9 ENCFF152GTF 248 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 175 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 308 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 245 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 232 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 179 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 281 bp overlap
ChIP HEK293 ENCFF498RMM 245 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 187 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 132 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 79 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 119 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 126 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 130 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 194 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 221 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 232 bp overlap
ChIP MCF-7 ENCFF198DQX 203 bp overlap
ChIP MCF-7 ENCFF494VXA 203 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 139 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 133 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 194 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 340 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 280 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 192 bp overlap
ChIP PC-3 ENCFF487TUI 330 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 275 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 293 bp overlap
ChIP RWPE2 ENCFF911IEE 385 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 106 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 381 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 254 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 237 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 123 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 193 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 159 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 176 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 163 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 162 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 204 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 207 bp overlap
ChIP THP-1_siCtrl-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-4h 318 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 122 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 151 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 201 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 121 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 145 bp overlap
ChIP astrocyte_cerebellum ENCSR000DSZ.CTCF.astrocyte_cerebellum 179 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 129 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 256 bp overlap
ChIP endodermal cell ENCFF471YCZ 227 bp overlap
ChIP endodermal cell ENCFF471YCZ 119 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 137 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 211 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 122 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 263 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 336 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 217 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 196 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 191 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 139 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR073TPC.CTCF.esophagus-muscularis-mucosa 226 bp overlap
ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 193 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 231 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 198 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 254 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 247 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 214 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 163 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 172 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 233 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 200 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 138 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 177 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 159 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 152 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 155 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 179 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 213 bp overlap
ChIP islet ERP004003.CTCF.islet 196 bp overlap
ChIP keratinocyte ENCFF046PBT 51 bp overlap
ChIP keratinocyte ENCFF291YDC 51 bp overlap
ChIP keratinocyte ENCFF667ULX 272 bp overlap
ChIP keratinocyte ENCFF805QIE 296 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 385 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 341 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 234 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 184 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 171 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 225 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 225 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 216 bp overlap
ChIP mammary epithelial cell ENCFF873ERE 226 bp overlap
ChIP neural crest cell ENCFF182LWK 290 bp overlap
ChIP neural progenitor cell ENCFF420RBO 296 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 186 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 161 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 275 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 161 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 218 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 299 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 385 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 222 bp overlap
ChIP thyroid-gland ENCSR033KMZ.CTCF.thyroid-gland 204 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 200 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 347 bp overlap
CTCFL 1 dataset
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 139 bp overlap
CUX2 1 dataset
Motif DE_12h DE_12h-CUX2_MA0755.2 9 bp overlap
DMRTA2 2 datasets
Motif DE_12h DE_12h-DMRTA2_MA1478.2 6 bp overlap
Motif ES_0h ES_0h-DMRTA2_MA1478.2 6 bp overlap
DUX4 1 dataset
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
EHF 2 datasets
Motif DE_12h DE_12h-EHF_MA0598.4 9 bp overlap
Motif ES_0h ES_0h-EHF_MA0598.4 9 bp overlap
ELF3 2 datasets
Motif DE_12h DE_12h-ELF3_MA0640.3 9 bp overlap
Motif ES_0h ES_0h-ELF3_MA0640.3 9 bp overlap
ESRRA 1 dataset
Motif DE_12h DE_12h-ESRRA_MA0592.4 9 bp overlap
ESRRB 1 dataset
Motif DE_12h DE_12h-ESRRB_MA0141.4 10 bp overlap
ETV1 2 datasets
Motif DE_12h DE_12h-ETV1_MA0761.3 9 bp overlap
Motif ES_0h ES_0h-ETV1_MA0761.3 9 bp overlap
ETV2::FOXI1 2 datasets
Motif DE_12h DE_12h-ETV2FOXI1_MA1942.2 11 bp overlap
Motif ES_0h ES_0h-ETV2FOXI1_MA1942.2 11 bp overlap
ETV5::FOXO1 1 dataset
Motif DE_12h DE_12h-ETV5FOXO1_MA1947.2 10 bp overlap
ETV6 2 datasets
Motif DE_12h DE_12h-ETV6_MA0645.2 9 bp overlap
Motif ES_0h ES_0h-ETV6_MA0645.2 9 bp overlap
EZH2 1 dataset
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 124 bp overlap
Elf5 2 datasets
Motif DE_12h DE_12h-Elf5_MA0136.4 8 bp overlap
Motif ES_0h ES_0h-Elf5_MA0136.4 8 bp overlap
Erg 2 datasets
Motif DE_12h DE_12h-Erg_MA0474.4 10 bp overlap
Motif ES_0h ES_0h-Erg_MA0474.4 10 bp overlap
Esrrg 1 dataset
Motif DE_12h DE_12h-Esrrg_MA0643.2 9 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 136 bp overlap
FOS 1 dataset
Motif DE_12h DE_12h-FOS_MA1951.2 13 bp overlap
FOS::JUN 1 dataset
Motif DE_12h DE_12h-FOSJUN_MA1126.2 10 bp overlap
GABPA 2 datasets
Motif DE_12h DE_12h-GABPA_MA0062.4 10 bp overlap
Motif ES_0h ES_0h-GABPA_MA0062.4 10 bp overlap
HIF1A 1 dataset
ChIP macrophage_HYPO GSE43109.HIF1A.macrophage_HYPO 78 bp overlap
IKZF2 2 datasets
Motif DE_12h DE_12h-IKZF2_MA2326.1 6 bp overlap
Motif ES_0h ES_0h-IKZF2_MA2326.1 6 bp overlap
JUN 1 dataset
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
JUND 2 datasets
Motif DE_12h DE_12h-JUND_MA0492.2 11 bp overlap
ChIP WA01 ENCSR000EBZ.JUND.WA01 197 bp overlap
MAX 1 dataset
ChIP WA01 ENCSR000EUP.MAX.WA01 199 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
NFIB 1 dataset
Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 217 bp overlap
NR1I3 2 datasets
Motif DE_12h DE_12h-NR1I3_MA1534.2 8 bp overlap
Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap
Nfat5 3 datasets
Motif DE_12h DE_12h-Nfat5_MA0606.3 8 bp overlap
Motif DE_36h DE_36h-Nfat5_MA0606.3 8 bp overlap
Motif ES_0h ES_0h-Nfat5_MA0606.3 8 bp overlap
Nr2e1 3 datasets
Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap
Motif DE_36h DE_36h-Nr2e1_MA0676.1 9 bp overlap
Motif ES_0h ES_0h-Nr2e1_MA0676.1 9 bp overlap
RAD21 10 datasets
ChIP H1 ENCFF698EWO 61 bp overlap
ChIP H1 ENCFF967OJF 87 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 119 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 137 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 127 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 121 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 157 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 194 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 197 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 144 bp overlap
SMC1A 2 datasets
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d0 314 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.SMC1A.primary-epidermal-keratinocyte_diff_d6 237 bp overlap
SPI1 7 datasets
ChIP CTV-1_delQA GSE128835.SPI1.CTV-1_delQA 178 bp overlap
ChIP EM-3 GSE128834.SPI1.EM-3 205 bp overlap
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 229 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 209 bp overlap
ChIP THP-1 GSE128834.SPI1.THP-1 135 bp overlap
ChIP U-937 GSE128834.SPI1.U-937 258 bp overlap
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 109 bp overlap
SPIB 2 datasets
Motif DE_12h DE_12h-SPIB_MA0081.3 13 bp overlap
Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap
Spi1 2 datasets
Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap
Motif ES_0h ES_0h-Spi1_MA0080.7 13 bp overlap
Spz1 1 dataset
Motif DE_12h DE_12h-Spz1_MA0111.1 11 bp overlap
TEAD1 1 dataset
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 230 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 126 bp overlap
TP53 1 dataset
Motif DE_12h DE_12h-TP53_MA0106.3 18 bp overlap
TP63 4 datasets
ChIP BxPC-3 GSE115461.TP63.BxPC-3 236 bp overlap
ChIP MCF-10A_Nutlin3A GSE111009.TP63.MCF-10A_Nutlin3A 234 bp overlap
ChIP SUIT-2 GSE115461.TP63.SUIT-2 353 bp overlap
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 196 bp overlap
TP73 1 dataset
Motif DE_12h DE_12h-TP73_MA0861.2 16 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 155 bp overlap
ZNF175 2 datasets
Motif DE_12h DE_12h-ZNF175_MA2332.1 9 bp overlap
Motif ES_0h ES_0h-ZNF175_MA2332.1 9 bp overlap
ZNF317 2 datasets
Motif DE_12h DE_12h-ZNF317_MA1593.2 8 bp overlap
Motif ES_0h ES_0h-ZNF317_MA1593.2 8 bp overlap
ZNF549 3 datasets
Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap
Motif DE_36h DE_36h-ZNF549_MA1728.2 8 bp overlap
Motif ES_0h ES_0h-ZNF549_MA1728.2 8 bp overlap
ZNF582 2 datasets
Motif DE_12h DE_12h-ZNF582_MA1983.2 19 bp overlap
Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap
ZNF750 1 dataset
ChIP keratinocyte_diff GSE57702.ZNF750.keratinocyte_diff 232 bp overlap
ZNF768 2 datasets
Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap
Motif ES_0h ES_0h-ZNF768_MA1731.2 9 bp overlap
ZSCAN16 1 dataset
Motif DE_12h DE_12h-ZSCAN16_MA2100.1 18 bp overlap
Zfp335 4 datasets
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap
Motif DE_36h DE_36h-Zfp335_MA2002.2 7 bp overlap
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
Zic1::Zic2 1 dataset
Motif DE_12h DE_12h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_12h DE_12h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_12h DE_12h-Zic3_MA0697.3 7 bp overlap
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