chr4 : 23,959,637 23,960,204
567 bp 32 TFs 0 linked genes
This 567 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr4:23,954,637 – 23,965,204
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 16 datasets
ChIP LNCaP ERP001226.AR.LNCaP 242 bp overlap
ChIP LNCaP GSE110655.AR.LNCaP 254 bp overlap
ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 377 bp overlap
ChIP LNCaP-abl_DMSO GSE80238.AR.LNCaP-abl_DMSO 227 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 238 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 236 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 428 bp overlap
ChIP LNCaP_DHT24H GSE58428.AR.LNCaP_DHT24H 381 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 152 bp overlap
ChIP LNCaP_SHGATA2_ETOH GSE69043.AR.LNCaP_SHGATA2_ETOH 112 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 312 bp overlap
ChIP LNCaP_androgen-N_hypoxia-Y GSE114732.AR.LNCaP_androgen-N_hypoxia-Y 369 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 242 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 188 bp overlap
ChIP prostate-cancer GSE136128.AR.prostate-cancer 192 bp overlap
ChIP prostate-cancer_shCXXC5 GSE136128.AR.prostate-cancer_shCXXC5 161 bp overlap
BCOR 1 dataset
ChIP VCaP_EtOH GSE122572.BCOR.VCaP_EtOH 200 bp overlap
BRD4 2 datasets
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 285 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 295 bp overlap
CREB1 1 dataset
ChIP LNCaP-abl_SHFOXA1 GSE63034.CREB1.LNCaP-abl_SHFOXA1 279 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 289 bp overlap
ELF1 1 dataset
ChIP A-549 GSE122203.ELF1.A-549 108 bp overlap
FEZF1 3 datasets
ChIP HEK293 ENCFF528YED 136 bp overlap
ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 506 bp overlap
ChIP HEK293 GSE76494.FEZF1.HEK293 223 bp overlap
FOXA1 2 datasets
ChIP LNCaP_DHT24H GSE58428.FOXA1.LNCaP_DHT24H 353 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 419 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 430 bp overlap
ChIP DE DE-FOXA2-2 332 bp overlap
GATA2 3 datasets
ChIP LNCaP GSE38391.GATA2.LNCaP 417 bp overlap
ChIP LNCaP GSE52725.GATA2.LNCaP 417 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 358 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 558 bp overlap
ChIP DE DE-GATA4-2 567 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 542 bp overlap
ChIP foregut GSE117136.GATA4.foregut 519 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 562 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 461 bp overlap
GATA6 9 datasets
ChIP AGS GSE51705.GATA6.AGS 195 bp overlap
ChIP DE DE-GATA6-1 556 bp overlap
ChIP DE DE-GATA6-2 497 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 479 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 542 bp overlap
ChIP foregut GSE117136.GATA6.foregut 524 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 490 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 325 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 372 bp overlap
HOXB13 10 datasets
ChIP LNCaP GSE56288.HOXB13.LNCaP 332 bp overlap
ChIP LNCaP GSE96652.HOXB13.LNCaP 270 bp overlap
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 244 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 189 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 210 bp overlap
ChIP prostate_P1_T GSE130408.HOXB13.prostate_P1_T 310 bp overlap
ChIP prostate_P23 GSE130408.HOXB13.prostate_P23 179 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 164 bp overlap
ChIP prostate_P29 GSE130408.HOXB13.prostate_P29 223 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 330 bp overlap
MYCN 1 dataset
ChIP LNCaP_DHT GSE117304.MYCN.LNCaP_DHT 324 bp overlap
NFIA 1 dataset
ChIP K-562 GSE97661.NFIA.K-562 132 bp overlap
NFIC 4 datasets
ChIP Ishikawa ENCFF029AAD 152 bp overlap
ChIP Ishikawa ENCSR000BUT.NFIC.Ishikawa 60 bp overlap
ChIP K-562 ENCSR796ITY.NFIC.K-562 191 bp overlap
ChIP K562 ENCFF167YID 228 bp overlap
POLR2A 1 dataset
ChIP adrenal gland ENCFF843OBJ 497 bp overlap
PRDM10 1 dataset
ChIP HEK293 ENCFF145WQQ 268 bp overlap
RELA 2 datasets
ChIP LNCaP_SICTR_TNFA GSE83860.RELA.LNCaP_SICTR_TNFA 203 bp overlap
ChIP LNCaP_SIFOXA1_TNFA GSE83860.RELA.LNCaP_SIFOXA1_TNFA 122 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 333 bp overlap
TCF7L2 1 dataset
ChIP MDA-MB-453 GSE45201.TCF7L2.MDA-MB-453 199 bp overlap
TFAP4 1 dataset
ChIP LNCaP GSE28857.TFAP4.LNCaP 202 bp overlap
TLE3 2 datasets
ChIP LNCaP GSE94682.TLE3.LNCaP 256 bp overlap
ChIP LNCaP_r1881 GSE94682.TLE3.LNCaP_r1881 203 bp overlap
XBP1 1 dataset
ChIP LNCaP_Tg GSE121880.XBP1.LNCaP_Tg 375 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 248 bp overlap
ZNF19 1 dataset
ChIP HEK293T GSE78099.ZNF19.HEK293T 294 bp overlap
ZNF335 2 datasets
ChIP HEK293 ENCFF784SLD 567 bp overlap
ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 567 bp overlap