chr3 : 87,052,539 – 87,052,905

366 bp 62 TFs 1 linked gene

This 366 bp open chromatin element is linked to PPATP1 and is bound by 62 transcription factors.

Linked Genes

1 gene

Gene	Expression	Dist. to TSS	Distance	Link type
PPATP1		at TSS	At TSS	Proximity

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

Ahr::Arnt 3 datasets

Motif DE_12h DE_12h-AhrArnt_MA0006.2 5 bp overlap

Motif ES_0h ES_0h-AhrArnt_MA0006.2 5 bp overlap

Arnt 1 dataset

Motif DE_12h DE_12h-Arnt_MA0004.1 6 bp overlap

BHLHE22 2 datasets

Motif DE_12h DE_12h-BHLHE22_MA1635.2 6 bp overlap

Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap

CBFB 1 dataset

ChIP ME-1 GSE46044.CBFB.ME-1 238 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 191 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 285 bp overlap

EGR2 2 datasets

Motif DE_12h DE_12h-EGR2_MA0472.2 11 bp overlap

Motif ES_0h ES_0h-EGR2_MA0472.2 11 bp overlap

ERF::FIGLA 1 dataset

Motif DE_12h DE_12h-ERFFIGLA_MA1934.2 13 bp overlap

ERF::SREBF2 1 dataset

Motif DE_12h DE_12h-ERFSREBF2_MA1939.2 16 bp overlap

ERG 2 datasets

ChIP CD34_NR29 GSE23730.ERG.CD34_NR29 191 bp overlap

ChIP MCF-7 GSE23730.ERG.MCF-7 289 bp overlap

ESR1 3 datasets

ChIP Ishikawa GSE99905.ESR1.Ishikawa 237 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 218 bp overlap

ChIP MCF-7 GSE48930.ESR1.MCF-7 176 bp overlap

ETV2::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV2FIGLA_MA1941.2 13 bp overlap

ETV5::FIGLA 1 dataset

Motif DE_12h DE_12h-ETV5FIGLA_MA1945.2 14 bp overlap

FLI1 1 dataset

ChIP TSU-1621MT GSE60477.FLI1.TSU-1621MT 303 bp overlap

Foxn1 2 datasets

Motif DE_12h DE_12h-Foxn1_MA1684.1 6 bp overlap

Motif ES_0h ES_0h-Foxn1_MA1684.1 6 bp overlap

GCM1 2 datasets

Motif DE_12h DE_12h-GCM1_MA0646.2 10 bp overlap

Motif ES_0h ES_0h-GCM1_MA0646.2 10 bp overlap

HIF1A 1 dataset

Motif DE_12h DE_12h-HIF1A_MA1106.2 6 bp overlap

MAX 3 datasets

Motif DE_12h DE_12h-MAX_MA0058.4 6 bp overlap

ChIP H1 ENCFF914VQY 196 bp overlap

ChIP WA01 ENCSR000EUP.MAX.WA01 221 bp overlap

MAX::MYC 1 dataset

Motif DE_12h DE_12h-MAXMYC_MA0059.2 10 bp overlap

MLXIPL 1 dataset

Motif DE_12h DE_12h-MLXIPL_MA0664.2 8 bp overlap

MNT 1 dataset

Motif DE_12h DE_12h-MNT_MA0825.2 6 bp overlap

MXI1 2 datasets

Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap

Motif ES_0h ES_0h-MXI1_MA1108.3 6 bp overlap

MYC 1 dataset

Motif DE_12h DE_12h-MYC_MA0147.4 8 bp overlap

MYCN 1 dataset

Motif DE_12h DE_12h-MYCN_MA0104.5 8 bp overlap

MYOCD 1 dataset

ChIP A-549 GSE128921.MYOCD.A-549 326 bp overlap

MYOG 2 datasets

Motif DE_12h DE_12h-MYOG_MA0500.3 8 bp overlap

Motif ES_0h ES_0h-MYOG_MA0500.3 8 bp overlap

Mlxip 1 dataset

Motif DE_12h DE_12h-Mlxip_MA0622.2 6 bp overlap

NHLH1 2 datasets

Motif DE_12h DE_12h-NHLH1_MA0048.3 9 bp overlap

Motif ES_0h ES_0h-NHLH1_MA0048.3 9 bp overlap

Neurod2 2 datasets

Motif DE_12h DE_12h-Neurod2_MA1993.2 6 bp overlap

Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap

Npas2 1 dataset

Motif DE_12h DE_12h-Npas2_MA0626.2 8 bp overlap

OGG1 3 datasets

ChIP HEK293 GSE89017.OGG1.HEK293 310 bp overlap

ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 319 bp overlap

ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 312 bp overlap

Olig2 2 datasets

Motif DE_12h DE_12h-Olig2_MA1997.2 6 bp overlap

Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap

PAX3-FOXO1 1 dataset

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 302 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 153 bp overlap

RNF2 2 datasets

ChIP WA09 GSE105028.RNF2.WA09 247 bp overlap

ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 318 bp overlap

RUNX1 1 dataset

ChIP Jurkat GSE85524.RUNX1.Jurkat 252 bp overlap

RXR 1 dataset

ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 198 bp overlap

SOHLH2 1 dataset

Motif DE_12h DE_12h-SOHLH2_MA1560.2 8 bp overlap

SREBP2 1 dataset

ChIP HCC70 GSE126380.SREBP2.HCC70 223 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TEAD1 1 dataset

Motif DE_12h DE_12h-TEAD1_MA0090.4 9 bp overlap

TEAD2 1 dataset

Motif DE_12h DE_12h-TEAD2_MA1121.2 7 bp overlap

TEAD3 1 dataset

Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

TFAP2A 1 dataset

Motif DE_12h DE_12h-TFAP2A_MA0003.5 9 bp overlap

TFAP2C 1 dataset

Motif DE_12h DE_12h-TFAP2C_MA0814.3 9 bp overlap

TFAP4::ETV1 1 dataset

Motif DE_12h DE_12h-TFAP4ETV1_MA1966.2 13 bp overlap

TFIIIC 1 dataset

ChIP HEK293 GSE119418.TFIIIC.HEK293 219 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 182 bp overlap

Tcf12 2 datasets

Motif DE_12h DE_12h-Tcf12_MA0521.3 6 bp overlap

Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap

Twist2 2 datasets

Motif DE_12h DE_12h-Twist2_MA0633.3 6 bp overlap

Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 121 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 318 bp overlap

ZBTB6 1 dataset

Motif DE_12h DE_12h-ZBTB6_MA1581.2 9 bp overlap

ZFP57 3 datasets

Motif DE_12h DE_12h-ZFP57_MA1583.2 7 bp overlap

Motif ES_0h ES_0h-ZFP57_MA1583.2 7 bp overlap

ChIP hESC GSE115387.ZFP57.hESC 366 bp overlap

ZIC1 1 dataset

Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF320 1 dataset

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

ZNF426 2 datasets

ChIP HEK293 ENCFF957XYN 72 bp overlap

ChIP HEK293 ENCSR224NFP.ZNF426.HEK293 55 bp overlap

ZNF680 1 dataset

Motif DE_12h DE_12h-ZNF680_MA1729.2 11 bp overlap

ZNF8 2 datasets

Motif DE_12h DE_12h-ZNF8_MA1718.1 20 bp overlap

Motif ES_0h ES_0h-ZNF8_MA1718.1 20 bp overlap

ZNF93 1 dataset

Motif DE_12h DE_12h-ZNF93_MA1721.2 14 bp overlap