Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 51 bp overlap

BCOR 2 datasets

ChIP WA01 GSE104690.BCOR.WA01 176 bp overlap

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 215 bp overlap

BRD2 1 dataset

ChIP HUVEC-C GSE60171.BRD2.HUVEC-C 223 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 185 bp overlap

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 333 bp overlap

CLOCK 1 dataset

ChIP BA40_3 GSE96659.CLOCK.BA40_3 103 bp overlap

CTCF 5 datasets

ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 176 bp overlap

ChIP anterior-temporal-cortex_fetal GSE116825.CTCF.anterior-temporal-cortex_fetal 174 bp overlap

ChIP neural ENCSR822CEA.CTCF.neural 210 bp overlap

ChIP neural cell ENCFF335ADI 305 bp overlap

ChIP type B pancreatic cell ENCFF910FNQ 220 bp overlap

EP300 4 datasets

ChIP hESC GSE17917.EP300.hESC 152 bp overlap

ChIP neural ENCSR843ZUP.EP300.neural 253 bp overlap

ChIP neural cell ENCFF442QNK 296 bp overlap

ChIP tibial nerve ENCFF346AYA 124 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000BNR.HDAC2.WA01 179 bp overlap

MAX 1 dataset

ChIP WA01 ENCSR000EUP.MAX.WA01 138 bp overlap

MEIS1 1 dataset

Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap

MXI1 1 dataset

ChIP neural cell ENCFF623HQN 458 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 463 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 293 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 345 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 214 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 240 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 458 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 425 bp overlap

RAD21 2 datasets

ChIP neural ENCSR198ZYJ.RAD21.neural 289 bp overlap

ChIP neural cell ENCFF564MOT 150 bp overlap

REST 1 dataset

ChIP neural ENCSR000BTV.REST.neural 153 bp overlap

SAP30 2 datasets

ChIP H1 ENCFF149IOE 439 bp overlap

ChIP WA01 ENCSR000ATR.SAP30.WA01 316 bp overlap

SIN3A 5 datasets

ChIP H1 ENCFF042ZSL 463 bp overlap

ChIP H1 ENCFF896IJG 301 bp overlap

ChIP WA01 ENCSR000BIS.SIN3A.WA01 335 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 306 bp overlap

ChIP hiPSC_IID12 GSE106870.SIN3A.hiPSC_IID12 252 bp overlap

SMARCA4 4 datasets

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 231 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 306 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 346 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 448 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 312 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 413 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 463 bp overlap

SMC3 3 datasets

ChIP neural ENCSR404BPV.SMC3.neural 268 bp overlap

ChIP neural cell ENCFF795YGY 289 bp overlap

ChIP neural cell ENCFF795YGY 82 bp overlap

SOX2 6 datasets

ChIP H9 GSE46837.SOX2.H9 170 bp overlap

ChIP HNSC GSE69479.SOX2.HNSC 55 bp overlap

ChIP HNSC GSE69479.SOX2.HNSC 183 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 265 bp overlap

ChIP hESC GSE69479.SOX2.hESC 242 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 308 bp overlap

SOX21 1 dataset

ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 53 bp overlap

SP1 1 dataset

ChIP WA01 ENCSR000BIR.SP1.WA01 170 bp overlap

SP4 1 dataset

ChIP WA01 ENCSR000BQV.SP4.WA01 185 bp overlap

Stat5a 1 dataset

Motif ES_0h ES_0h-Stat5a_MA1624.2 9 bp overlap

Stat5a::Stat5b 1 dataset

Motif ES_0h ES_0h-Stat5aStat5b_MA0519.2 9 bp overlap

Stat6 1 dataset

Motif ES_0h ES_0h-Stat6_MA0520.2 10 bp overlap

TAF1 2 datasets

ChIP neural cell ENCFF468SPD 53 bp overlap

ChIP neural cell ENCFF468SPD 317 bp overlap

TAL1 1 dataset

ChIP PRIMA2 GSE33850.TAL1.PRIMA2 154 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 463 bp overlap

TP53 2 datasets

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 104 bp overlap

ChIP H9_ectoderm GSE142050.TP53.H9_ectoderm 64 bp overlap

Tfcp2l1 1 dataset

Motif ES_0h ES_0h-Tfcp2l1_MA0145.2 14 bp overlap

ZNF582 1 dataset

Motif ES_0h ES_0h-ZNF582_MA1983.2 19 bp overlap

ZNF680 1 dataset

Motif ES_0h ES_0h-ZNF680_MA1729.2 11 bp overlap

Genome Browser