chr2 : 198,285,278 – 198,285,625

347 bp 64 TFs 0 linked genes

This 347 bp open chromatin element has no linked target genes and is bound by 64 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

64 transcription factors

ASCL1 1 dataset

Motif DE_12h DE_12h-ASCL1_MA1631.2 9 bp overlap

ATF4 1 dataset

Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap

Atoh1 1 dataset

Motif DE_12h DE_12h-Atoh1_MA0461.3 8 bp overlap

CEBPG 1 dataset

Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF262VBH 181 bp overlap

Dmrt1 1 dataset

Motif DE_12h DE_12h-Dmrt1_MA1603.2 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 327 bp overlap

EZH2 3 datasets

ChIP DND41 ENCSR000ASW.EZH2.DND41 264 bp overlap

ChIP HCT-116 ENCSR046HGP.EZH2.HCT-116 347 bp overlap

ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 64 bp overlap

FEZF2 1 dataset

Motif DE_12h DE_12h-FEZF2_MA2341.1 8 bp overlap

FIGLA 1 dataset

Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap

GATA6 5 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 318 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 347 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 347 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 347 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 347 bp overlap

HES6 1 dataset

Motif DE_12h DE_12h-HES6_MA1493.1 10 bp overlap

HES7 1 dataset

Motif DE_12h DE_12h-HES7_MA0822.1 12 bp overlap

HIC2 1 dataset

Motif DE_12h DE_12h-HIC2_MA0738.2 6 bp overlap

Hic1 1 dataset

Motif DE_12h DE_12h-Hic1_MA0739.2 8 bp overlap

Isl1 1 dataset

Motif DE_12h DE_12h-Isl1_MA1608.2 7 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 318 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 301 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 304 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_12h DE_12h-MGAEVX1_MA1960.2 11 bp overlap

MITF 6 datasets

ChIP 501-mel GSE137522.MITF.501-mel 186 bp overlap

ChIP 501-mel GSE61965.MITF.501-mel 119 bp overlap

ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 203 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 186 bp overlap

ChIP K-562 ENCSR797SWM.MITF.K-562 136 bp overlap

ChIP K562 ENCFF731XJJ 177 bp overlap

MYB 3 datasets

ChIP Jurkat GSE59657.MYB.Jurkat 243 bp overlap

ChIP MOLT-3 GSE59657.MYB.MOLT-3 170 bp overlap

ChIP PF-382 GSE94000.MYB.PF-382 182 bp overlap

MYBL2 1 dataset

Motif DE_12h DE_12h-MYBL2_MA0777.1 15 bp overlap

NEUROG1 1 dataset

Motif DE_12h DE_12h-NEUROG1_MA0623.2 10 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

NKX6-3 1 dataset

Motif DE_12h DE_12h-NKX6-3_MA1530.2 8 bp overlap

PKNOX2 1 dataset

Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap

PLAG1 1 dataset

Motif DE_12h DE_12h-PLAG1_MA0163.1 14 bp overlap

PRDM9 1 dataset

Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 347 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 347 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 347 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 347 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 347 bp overlap

SNAI1 1 dataset

Motif DE_12h DE_12h-SNAI1_MA1558.2 7 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

STAT1 1 dataset

Motif DE_12h DE_12h-STAT1_MA0137.4 9 bp overlap

STAT3 1 dataset

Motif DE_12h DE_12h-STAT3_MA0144.3 9 bp overlap

Sox11 1 dataset

Motif DE_12h DE_12h-Sox11_MA0869.3 8 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

Stat5b 1 dataset

Motif DE_12h DE_12h-Stat5b_MA1625.2 9 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 310 bp overlap

TBR1 1 dataset

Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap

TBX2 1 dataset

Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap

TBX21 1 dataset

Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap

TBX3 1 dataset

Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap

TCF12 1 dataset

Motif DE_12h DE_12h-TCF12_MA1648.2 7 bp overlap

TCF3 1 dataset

Motif DE_12h DE_12h-TCF3_MA0522.4 7 bp overlap

TCF7L2 1 dataset

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

TFE3 1 dataset

ChIP K562 ENCFF697ABG 157 bp overlap

TGIF1 1 dataset

Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap

TGIF2 1 dataset

Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap

TGIF2LY 1 dataset

Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap

Tbx6 1 dataset

Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap

USF1 3 datasets

Motif DE_12h DE_12h-USF1_MA0093.4 10 bp overlap

ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 87 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 92 bp overlap

ZEB1 1 dataset

Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap

ZNF213 1 dataset

Motif DE_12h DE_12h-ZNF213_MA2121.1 12 bp overlap

ZNF214 1 dataset

Motif DE_12h DE_12h-ZNF214_MA1975.2 13 bp overlap

ZNF257 1 dataset

ChIP HEK293T GSE78099.ZNF257.HEK293T 216 bp overlap

ZNF549 1 dataset

Motif DE_12h DE_12h-ZNF549_MA1728.2 8 bp overlap

ZNF573 1 dataset

ChIP HEK293T GSE78099.ZNF573.HEK293T 199 bp overlap

ZNF707 1 dataset

Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap

ZNF75A 1 dataset

Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap

Zfp335 2 datasets

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap