chr2 : 182,646,863 – 182,647,295
432 bp 60 TFs 0 linked genes
This 432 bp open chromatin element has no linked target genes and is bound by 60 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:182,641,863 – 182,652,295
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
60 transcription factors
Source
Cell type
ARID1A 1 dataset
ChIP NGP GSE134626.ARID1A.NGP 432 bp overlap
BARX1 2 datasets
Motif DE_48h DE_48h-BARX1_MA0875.2 6 bp overlap
Motif DE_60h DE_60h-BARX1_MA0875.2 6 bp overlap
BARX2 2 datasets
Motif DE_48h DE_48h-BARX2_MA1471.2 9 bp overlap
Motif DE_60h DE_60h-BARX2_MA1471.2 9 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 356 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.BRD4.Kelly_resistant_JQ1 413 bp overlap
BSX 2 datasets
Motif DE_48h DE_48h-BSX_MA0876.2 6 bp overlap
Motif DE_60h DE_60h-BSX_MA0876.2 6 bp overlap
CHD2 2 datasets
ChIP SK-N-SH ENCFF669KMB 287 bp overlap
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 234 bp overlap
DLX1 2 datasets
Motif DE_48h DE_48h-DLX1_MA0879.3 6 bp overlap
Motif DE_60h DE_60h-DLX1_MA0879.3 6 bp overlap
DLX6 2 datasets
Motif DE_48h DE_48h-DLX6_MA0882.2 6 bp overlap
Motif DE_60h DE_60h-DLX6_MA0882.2 6 bp overlap
Dlx3 2 datasets
Motif DE_48h DE_48h-Dlx3_MA0880.2 6 bp overlap
Motif DE_60h DE_60h-Dlx3_MA0880.2 6 bp overlap
Dlx4 2 datasets
Motif DE_48h DE_48h-Dlx4_MA0881.2 6 bp overlap
Motif DE_60h DE_60h-Dlx4_MA0881.2 6 bp overlap
EBF1 1 dataset
ChIP MUTUL GSE75503.EBF1.MUTUL 317 bp overlap
EBF3_P177L 1 dataset
ChIP SK-N-SH GSE90682.EBF3_P177L.SK-N-SH 432 bp overlap
EN2 2 datasets
Motif DE_48h DE_48h-EN2_MA0642.3 7 bp overlap
Motif DE_60h DE_60h-EN2_MA0642.3 7 bp overlap
EP300 2 datasets
ChIP SK-N-SH ENCFF829RWA 221 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 261 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 384 bp overlap
ChIP DE DE-FOXA2-2 387 bp overlap
GATA2 6 datasets
ChIP SH-SY5Y ENCFF485YIB 355 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 432 bp overlap
ChIP SK-N-SH ENCFF764OZD 110 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 233 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 82 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 148 bp overlap
GATA3 8 datasets
ChIP BE2C GSE65664.GATA3.BE2C 216 bp overlap
ChIP CLB-Ga GSE90683.GATA3.CLB-Ga 193 bp overlap
ChIP Kelly GSE94822.GATA3.Kelly 424 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 80 bp overlap
ChIP SH-SY5Y ENCFF475HYF 369 bp overlap
ChIP SH-SY5Y ENCFF475HYF 264 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 432 bp overlap
ChIP SK-N-SH ENCFF040SSB 325 bp overlap
GATA4 8 datasets
ChIP DE DE-GATA4-1 394 bp overlap
ChIP DE DE-GATA4-2 432 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
Motif DE_60h DE_60h-GATA4_MA0482.3 8 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 432 bp overlap
ChIP foregut GSE117136.GATA4.foregut 343 bp overlap
GATA5 2 datasets
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
Motif DE_60h DE_60h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 407 bp overlap
ChIP DE DE-GATA6-2 432 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
Motif DE_60h DE_60h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 249 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 318 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 432 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 432 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 346 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 332 bp overlap
ChIP foregut GSE117136.GATA6.foregut 289 bp overlap
GBX1 2 datasets
Motif DE_48h DE_48h-GBX1_MA0889.2 7 bp overlap
Motif DE_60h DE_60h-GBX1_MA0889.2 7 bp overlap
GBX2 2 datasets
Motif DE_48h DE_48h-GBX2_MA0890.2 6 bp overlap
Motif DE_60h DE_60h-GBX2_MA0890.2 6 bp overlap
Gata3 2 datasets
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
Motif DE_60h DE_60h-Gata3_MA0037.5 8 bp overlap
HAND2 4 datasets
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 432 bp overlap
ChIP Kelly GSE94822.HAND2.Kelly 432 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 250 bp overlap
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 57 bp overlap
HESX1 2 datasets
Motif DE_48h DE_48h-HESX1_MA0894.2 6 bp overlap
Motif DE_60h DE_60h-HESX1_MA0894.2 6 bp overlap
HOXA7 2 datasets
Motif DE_48h DE_48h-HOXA7_MA1498.3 6 bp overlap
Motif DE_60h DE_60h-HOXA7_MA1498.3 6 bp overlap
HSF1 1 dataset
ChIP MO91 GSE45852.HSF1.MO91 176 bp overlap
ISL1 2 datasets
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 432 bp overlap
ChIP SK-N-SH ENCFF285GEQ 203 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 392 bp overlap
LBX1 2 datasets
Motif DE_48h DE_48h-LBX1_MA0618.2 7 bp overlap
Motif DE_60h DE_60h-LBX1_MA0618.2 7 bp overlap
LBX2 2 datasets
Motif DE_48h DE_48h-LBX2_MA0699.2 6 bp overlap
Motif DE_60h DE_60h-LBX2_MA0699.2 6 bp overlap
LHX2 2 datasets
Motif DE_48h DE_48h-LHX2_MA0700.3 6 bp overlap
Motif DE_60h DE_60h-LHX2_MA0700.3 6 bp overlap
LHX9 2 datasets
Motif DE_48h DE_48h-LHX9_MA0701.3 7 bp overlap
Motif DE_60h DE_60h-LHX9_MA0701.3 7 bp overlap
MSX1 2 datasets
Motif DE_48h DE_48h-MSX1_MA0666.3 6 bp overlap
Motif DE_60h DE_60h-MSX1_MA0666.3 6 bp overlap
MSX2 2 datasets
Motif DE_48h DE_48h-MSX2_MA0708.3 6 bp overlap
Motif DE_60h DE_60h-MSX2_MA0708.3 6 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCSR000EIA.MXI1.SK-N-SH 164 bp overlap
MYC 2 datasets
ChIP NB69 GSE138295.MYC.NB69 111 bp overlap
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 61 bp overlap
MYCN 4 datasets
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 299 bp overlap
ChIP Kelly GSE94822.MYCN.Kelly 250 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 340 bp overlap
ChIP NGP GSE80151.MYCN.NGP 182 bp overlap
Msx3 2 datasets
Motif DE_48h DE_48h-Msx3_MA0709.2 6 bp overlap
Motif DE_60h DE_60h-Msx3_MA0709.2 6 bp overlap
Nobox 2 datasets
Motif DE_48h DE_48h-Nobox_MA0125.2 6 bp overlap
Motif DE_60h DE_60h-Nobox_MA0125.2 6 bp overlap
PHOX2A 2 datasets
Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap
Motif DE_60h DE_60h-PHOX2A_MA0713.1 11 bp overlap
PHOX2B 3 datasets
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 432 bp overlap
Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap
Motif DE_60h DE_60h-PHOX2B_MA0681.3 12 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 432 bp overlap
PROP1 2 datasets
Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap
Motif DE_60h DE_60h-PROP1_MA0715.1 11 bp overlap
PRRX2 2 datasets
Motif DE_48h DE_48h-PRRX2_MA0075.4 7 bp overlap
Motif DE_60h DE_60h-PRRX2_MA0075.4 7 bp overlap
RAD21 1 dataset
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 205 bp overlap
RAX 2 datasets
Motif DE_48h DE_48h-RAX_MA0718.2 6 bp overlap
Motif DE_60h DE_60h-RAX_MA0718.2 6 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 282 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 350 bp overlap
RFX5 1 dataset
ChIP SK-N-SH ENCSR000EHY.RFX5.SK-N-SH 125 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 275 bp overlap
SMAD2_3 1 dataset
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 246 bp overlap
SMARCA4 4 datasets
ChIP NGP GSE134626.SMARCA4.NGP 432 bp overlap
ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 404 bp overlap
ChIP NGP_ARID1A-mut1 GSE134626.SMARCA4.NGP_ARID1A-mut1 432 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 432 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 130 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 230 bp overlap
TRPS1 2 datasets
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
Motif DE_60h DE_60h-TRPS1_MA1970.2 8 bp overlap
TSHZ2 2 datasets
ChIP SK-N-SH ENCFF182EBB 287 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 209 bp overlap
YY1 1 dataset
ChIP SK-N-SH ENCSR000BLZ.YY1.SK-N-SH 145 bp overlap
ZNF558 2 datasets
Motif DE_48h DE_48h-ZNF558_MA2335.1 29 bp overlap
Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap
ZNF677 2 datasets
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF75A 2 datasets
Motif DE_48h DE_48h-ZNF75A_MA2097.1 12 bp overlap
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
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