chr2 : 115,214,084 – 115,214,450

366 bp 58 TFs 0 linked genes

This 366 bp open chromatin element has no linked target genes and is bound by 58 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

58 transcription factors

BCL11A 2 datasets

ChIP WA01 ENCSR000BMJ.BCL11A.WA01 139 bp overlap

ChIP WA01 ENCSR000BIP.BCL11A.WA01 175 bp overlap

CEBPB 2 datasets

ChIP H1 ENCFF871PTR 261 bp overlap

ChIP WA01 ENCSR000EBV.CEBPB.WA01 210 bp overlap

CHD7 2 datasets

ChIP H1 ENCFF126NLU 366 bp overlap

ChIP WA01 ENCSR000AVA.CHD7.WA01 221 bp overlap

DMRTC2 1 dataset

Motif ES_0h ES_0h-DMRTC2_MA1479.2 11 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 239 bp overlap

ETV2::HOXB13 1 dataset

Motif DE_12h DE_12h-ETV2HOXB13_MA1943.2 13 bp overlap

EWSR1-FLI1 1 dataset

Motif DE_12h DE_12h-EWSR1-FLI1_MA0149.1 18 bp overlap

FOSB::JUN 1 dataset

Motif ES_0h ES_0h-FOSBJUN_MA1127.1 11 bp overlap

FOSL2::JUND 1 dataset

Motif ES_0h ES_0h-FOSL2JUND_MA1145.2 10 bp overlap

FOXH1 1 dataset

Motif DE_12h DE_12h-FOXH1_MA0479.2 8 bp overlap

Foxq1 1 dataset

Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap

GLIS3 1 dataset

Motif DE_12h DE_12h-GLIS3_MA0737.1 14 bp overlap

Hand1 1 dataset

Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap

JUN::JUNB 1 dataset

Motif ES_0h ES_0h-JUNJUNB_MA1133.2 11 bp overlap

MEIS1 1 dataset

Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif ES_0h ES_0h-MGAEVX1_MA1960.2 11 bp overlap

MYB 2 datasets

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

Motif ES_0h ES_0h-MYB_MA0100.4 6 bp overlap

NANOG 11 datasets

ChIP GM23338 ENCFF065NZG 311 bp overlap

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 183 bp overlap

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 366 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 365 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 248 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 366 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 366 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 349 bp overlap

ChIP hESC GSE20650.NANOG.hESC 263 bp overlap

ChIP hESC GSE18292.NANOG.hESC 237 bp overlap

NFATC3 1 dataset

Motif ES_0h ES_0h-NFATC3_MA0625.3 6 bp overlap

NFIA 1 dataset

Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap

NFIC 1 dataset

Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap

NFIX 1 dataset

Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap

NIPBL 2 datasets

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 190 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 269 bp overlap

Nfatc1 1 dataset

Motif ES_0h ES_0h-Nfatc1_MA0624.3 6 bp overlap

POU2F1 2 datasets

Motif DE_12h DE_12h-POU2F1_MA0785.2 9 bp overlap

Motif ES_0h ES_0h-POU2F1_MA0785.2 9 bp overlap

POU2F1::SOX2 2 datasets

Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap

Motif ES_0h ES_0h-POU2F1SOX2_MA1962.1 17 bp overlap

POU2F2 2 datasets

Motif DE_12h DE_12h-POU2F2_MA0507.3 13 bp overlap

Motif ES_0h ES_0h-POU2F2_MA0507.3 13 bp overlap

POU2F3 2 datasets

Motif DE_12h DE_12h-POU2F3_MA0627.3 9 bp overlap

Motif ES_0h ES_0h-POU2F3_MA0627.3 9 bp overlap

POU3F4 2 datasets

Motif DE_12h DE_12h-POU3F4_MA0789.1 9 bp overlap

Motif ES_0h ES_0h-POU3F4_MA0789.1 9 bp overlap

POU5F1 8 datasets

Motif DE_12h DE_12h-POU5F1_MA1115.2 7 bp overlap

Motif ES_0h ES_0h-POU5F1_MA1115.2 7 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 366 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 293 bp overlap

ChIP WA09 GSE105028.POU5F1.WA09 280 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 366 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 174 bp overlap

ChIP hiPSC_3s2 GSE81899.POU5F1.hiPSC_3s2 146 bp overlap

POU5F1B 2 datasets

Motif DE_12h DE_12h-POU5F1B_MA0792.1 9 bp overlap

Motif ES_0h ES_0h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

Prdm5 2 datasets

Motif DE_12h DE_12h-Prdm5_MA1999.2 11 bp overlap

Motif ES_0h ES_0h-Prdm5_MA1999.2 11 bp overlap

RBPJ 3 datasets

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

ChIP GSC8-11_12d-das GSE74557.RBPJ.GSC8-11_12d-das 366 bp overlap

ChIP GSC8-11_dasatinib GSE74557.RBPJ.GSC8-11_dasatinib 312 bp overlap

REST 2 datasets

Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap

Motif ES_0h ES_0h-REST_MA0138.3 20 bp overlap

SIX2 1 dataset

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 145 bp overlap

SMAD2 4 datasets

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

ChIP hESC GSE29422.SMAD2.hESC 239 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 329 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 366 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 366 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 312 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 229 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 307 bp overlap

SMAD3 2 datasets

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 230 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 223 bp overlap

SMAD4 1 dataset

ChIP hESC GSE29422.SMAD4.hESC 172 bp overlap

SMARCA4 3 datasets

ChIP NSC GSE125033.SMARCA4.NSC 237 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 341 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 356 bp overlap

SMARCB1 2 datasets

ChIP hiPSC GSE124903.SMARCB1.hiPSC 237 bp overlap

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 366 bp overlap

SMARCC1 2 datasets

ChIP hiPSC GSE124903.SMARCC1.hiPSC 167 bp overlap

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 366 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 322 bp overlap

SP1 2 datasets

Motif DE_12h DE_12h-SP1_MA0079.5 9 bp overlap

ChIP WA01 ENCSR000BIR.SP1.WA01 180 bp overlap

SP5 1 dataset

Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 152 bp overlap

TEAD4 1 dataset

Motif DE_12h DE_12h-TEAD4_MA0809.3 8 bp overlap

Thap11 1 dataset

Motif ES_0h ES_0h-Thap11_MA1573.2 14 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 167 bp overlap

ZNF24 1 dataset

Motif DE_12h DE_12h-ZNF24_MA1124.1 13 bp overlap

ZNF263 1 dataset

Motif DE_12h DE_12h-ZNF263_MA0528.3 7 bp overlap

ZNF354C 1 dataset

Motif DE_12h DE_12h-ZNF354C_MA0130.1 6 bp overlap

ZNF410 1 dataset

Motif DE_12h DE_12h-ZNF410_MA0752.2 16 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 242 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 234 bp overlap

ZNF547 1 dataset

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

Zfp961 1 dataset

Motif DE_12h DE_12h-Zfp961_MA2126.1 8 bp overlap