chr1 : 29,991,109 29,991,332
223 bp 43 TFs 0 linked genes
This 223 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:29,986,109 – 29,996,332
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_GFP_shFOXA1_Ethanol GSE128883.AR.LNCaP_GFP_shFOXA1_Ethanol 219 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 199 bp overlap
EGR1 4 datasets
Motif DE_36h DE_36h-EGR1_MA0162.5 10 bp overlap
Motif DE_36h DE_36h-EGR1_MA0162.5 10 bp overlap
ChIP K-562 ENCSR000BNE.EGR1.K-562 124 bp overlap
ChIP K562 ENCFF006PJY 194 bp overlap
EGR2 1 dataset
Motif DE_36h DE_36h-EGR2_MA0472.2 11 bp overlap
EGR3 2 datasets
Motif DE_36h DE_36h-EGR3_MA0732.2 11 bp overlap
Motif DE_36h DE_36h-EGR3_MA0732.2 11 bp overlap
EGR4 2 datasets
Motif DE_36h DE_36h-EGR4_MA0733.2 11 bp overlap
Motif DE_36h DE_36h-EGR4_MA0733.2 11 bp overlap
ERG 1 dataset
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 194 bp overlap
ESR1 1 dataset
ChIP primary-breast-cancer_B2_DSG GSE114737.ESR1.primary-breast-cancer_B2_DSG 223 bp overlap
EZH2 2 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 52 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 195 bp overlap
GRHL2 1 dataset
ChIP T-47D GSE99680.GRHL2.T-47D 113 bp overlap
HEXIM1 1 dataset
ChIP HCT-116 GSE72622.HEXIM1.HCT-116 210 bp overlap
KLF1 1 dataset
Motif DE_36h DE_36h-KLF1_MA0493.3 8 bp overlap
KLF12 1 dataset
Motif DE_36h DE_36h-KLF12_MA0742.2 9 bp overlap
KLF14 1 dataset
Motif DE_36h DE_36h-KLF14_MA0740.2 9 bp overlap
KLF15 1 dataset
Motif DE_36h DE_36h-KLF15_MA1513.2 8 bp overlap
KLF2 1 dataset
Motif DE_36h DE_36h-KLF2_MA1515.2 8 bp overlap
KLF4 1 dataset
Motif DE_36h DE_36h-KLF4_MA0039.5 8 bp overlap
KLF5 1 dataset
Motif DE_36h DE_36h-KLF5_MA0599.1 10 bp overlap
KLF7 2 datasets
Motif DE_36h DE_36h-KLF7_MA1959.2 8 bp overlap
Motif DE_36h DE_36h-KLF7_MA1959.2 8 bp overlap
LMO2 1 dataset
ChIP CCRF-CEM GSE33850.LMO2.CCRF-CEM 67 bp overlap
MAF1 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.MAF1.THP-1_macrophage_PMA 159 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 162 bp overlap
NFYB 2 datasets
ChIP K-562 ENCSR000EGQ.NFYB.K-562 164 bp overlap
ChIP K562 ENCFF709RXX 223 bp overlap
NRF1 1 dataset
ChIP K-562 ENCSR837EYC.NRF1.K-562 152 bp overlap
OGG1 3 datasets
ChIP HEK293 GSE89017.OGG1.HEK293 223 bp overlap
ChIP HEK293_15min GSE89017.OGG1.HEK293_15min 223 bp overlap
ChIP HEK293_60_min GSE89017.OGG1.HEK293_60_min 223 bp overlap
PATZ1 1 dataset
Motif DE_36h DE_36h-PATZ1_MA1961.2 11 bp overlap
PKNOX1 2 datasets
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 223 bp overlap
ChIP K562 ENCFF236IUS 223 bp overlap
POLR2A 1 dataset
ChIP GM23338 ENCFF450WCS 223 bp overlap
RBBP5 1 dataset
ChIP WA01 ENCSR000AQC.RBBP5.WA01 135 bp overlap
RXR 1 dataset
ChIP TSU-1621MT GSE60477.RXR.TSU-1621MT 207 bp overlap
SALL2 1 dataset
ChIP HEK293 GSE145940.SALL2.HEK293 197 bp overlap
SP1 1 dataset
Motif DE_36h DE_36h-SP1_MA0079.5 9 bp overlap
SP2 1 dataset
Motif DE_36h DE_36h-SP2_MA0516.3 9 bp overlap
SP3 1 dataset
Motif DE_36h DE_36h-SP3_MA0746.3 11 bp overlap
SP4 1 dataset
Motif DE_36h DE_36h-SP4_MA0685.2 9 bp overlap
SP9 1 dataset
Motif DE_36h DE_36h-SP9_MA1564.2 10 bp overlap
SREBP2 1 dataset
ChIP HCC70 GSE126380.SREBP2.HCC70 218 bp overlap
STAT3 1 dataset
ChIP WA01 ERP004237.STAT3.WA01 194 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 193 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 60 bp overlap
ZNF148 1 dataset
Motif DE_36h DE_36h-ZNF148_MA1653.2 10 bp overlap
ZNF816 1 dataset
Motif DE_36h DE_36h-ZNF816_MA1719.2 15 bp overlap