chr2 : 24,332,907 – 24,333,498
591 bp 44 TFs 1 linked gene
This 591 bp open chromatin element is linked to RPL36AP13 and is bound by 44 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
RPL36AP13 1.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:24,327,907 – 24,338,498
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
44 transcription factors
Source
Cell type
ARID1B 2 datasets
ChIP K-562 ENCSR822CCM.ARID1B.K-562 228 bp overlap
ChIP K562 ENCFF938UXQ 328 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 444 bp overlap
BCL11A 1 dataset
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 72 bp overlap
BRD4 4 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 251 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 294 bp overlap
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 181 bp overlap
ChIP HEK293T GSE39579.BRD4.HEK293T 185 bp overlap
CBFA2T2 1 dataset
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 195 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 260 bp overlap
ChIP K562 ENCFF673OEZ 204 bp overlap
E2F8 1 dataset
ChIP GM12878 ENCSR793HVL.E2F8.GM12878 140 bp overlap
ELL2 1 dataset
ChIP HeLa_DOX GSE40632.ELL2.HeLa_DOX 172 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 349 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 388 bp overlap
ChIP neural cell ENCFF442QNK 287 bp overlap
EZH2 1 dataset
ChIP WSU-DLCL2 GSE45982.EZH2.WSU-DLCL2 189 bp overlap
FOXA2 1 dataset
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 91 bp overlap
GATA1 9 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 183 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 167 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 167 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 187 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 329 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 239 bp overlap
ChIP erythroblast ENCFF867JAR 435 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 508 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 243 bp overlap
GATA2 1 dataset
ChIP TF1 GSE73207.GATA2.TF1 355 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 314 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 219 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 446 bp overlap
ChIP DE DE-GATA6-2 367 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 548 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 591 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 524 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 330 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 591 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 591 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 538 bp overlap
HOXB13 1 dataset
ChIP prostate_2484_T GSE130408.HOXB13.prostate_2484_T 141 bp overlap
HOXC6 1 dataset
ChIP 22Rv1 GSE129951.HOXC6.22Rv1 86 bp overlap
IRF2BP2 1 dataset
ChIP HEK293 GSE124636.IRF2BP2.HEK293 459 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 333 bp overlap
KMT2A 2 datasets
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 207 bp overlap
ChIP SEM GSE83671.KMT2A.SEM 207 bp overlap
LDB1 2 datasets
ChIP HEP GSE52637.LDB1.HEP 173 bp overlap
ChIP K-562 GSE142227.LDB1.K-562 299 bp overlap
LMO2 1 dataset
ChIP TSU-1621MT GSE60477.LMO2.TSU-1621MT 108 bp overlap
MAFK 1 dataset
ChIP OCI-Ly7 GSE47784.MAFK.OCI-Ly7 214 bp overlap
MLLT1 1 dataset
ChIP GM12878 ENCSR552XSN.MLLT1.GM12878 295 bp overlap
NCOR1 1 dataset
ChIP K562 ENCFF788MPU 300 bp overlap
NRIP1 1 dataset
ChIP MCF-7_E2 ERP005838.NRIP1.MCF-7_E2 127 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 206 bp overlap
RELA 13 datasets
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 249 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 217 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 234 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 260 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 188 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 229 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 388 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 273 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 175 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 167 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 152 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 236 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 235 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 297 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 445 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 413 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 562 bp overlap
SMARCB1 1 dataset
ChIP proliferating-human-fibroblast GSE131711.SMARCB1.proliferating-human-fibroblast 94 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 377 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 283 bp overlap
SOX8 1 dataset
ChIP RH4_Entinostat-6H GSE116344.SOX8.RH4_Entinostat-6H 295 bp overlap
SPI1 3 datasets
ChIP DC_96h_donorM GSE128834.SPI1.DC_96h_donorM 166 bp overlap
ChIP DC_LPS GSE123347.SPI1.DC_LPS 119 bp overlap
ChIP K-562 GSE70482.SPI1.K-562 184 bp overlap
TAL1 13 datasets
ChIP CD34 GSE52924.TAL1.CD34 164 bp overlap
ChIP HSPC-CD34pos GSE93372.TAL1.HSPC-CD34pos 149 bp overlap
ChIP K-562 GSE107726.TAL1.K-562 228 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 181 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.TAL1.K-562_dCas9-KRAB 208 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 231 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 220 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 217 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 155 bp overlap
ChIP K562 ENCFF620GMX 284 bp overlap
ChIP K562 ENCFF661CCK 235 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 201 bp overlap
ChIP erythroid GSE42390.TAL1.erythroid 133 bp overlap
TCF12 1 dataset
ChIP K562 ENCFF931DJY 267 bp overlap
TCF3 2 datasets
ChIP K-562 ENCSR970OJY.TCF3.K-562 184 bp overlap
ChIP K562 ENCFF319QZT 275 bp overlap
WT1 2 datasets
ChIP HEK293 ENCFF906HIR 398 bp overlap
ChIP HEK293 ENCSR966PJJ.WT1.HEK293 301 bp overlap
ZBTB33 1 dataset
ChIP GM12878 ENCSR542FLV.ZBTB33.GM12878 110 bp overlap
ZNF30 1 dataset
ChIP HEK293 GSE76494.ZNF30.HEK293 148 bp overlap
ZNF449 1 dataset
ChIP HEK293 GSE76494.ZNF449.HEK293 101 bp overlap
Huangfu Lab · Publications · Resources · Contact