Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

ARID2 1 dataset

ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-T910M 323 bp overlap

Ahr::Arnt 2 datasets

Motif DE_36h DE_36h-AhrArnt_MA0006.2 5 bp overlap

BCOR 2 datasets

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 167 bp overlap

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 310 bp overlap

BRD4 2 datasets

ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 215 bp overlap

ChIP MCF-10A ERP003925.BRD4.MCF-10A 265 bp overlap

CDK9 2 datasets

ChIP MM1-S_JQ1_500NM GSE42355.CDK9.MM1-S_JQ1_500NM 218 bp overlap

ChIP MM1-S_JQ1_50NM GSE49224.CDK9.MM1-S_JQ1_50NM 253 bp overlap

CTCF 1 dataset

ChIP MM1-S GSE43743.CTCF.MM1-S 146 bp overlap

DMRTA2 1 dataset

Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 164 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 315 bp overlap

EOMES 1 dataset

Motif DE_36h DE_36h-EOMES_MA0800.2 9 bp overlap

EP300 1 dataset

ChIP osteoblast ENCSR000AUD.EP300.osteoblast 280 bp overlap

EZH2 5 datasets

ChIP A673 ENCFF955JRZ 60 bp overlap

ChIP H1 ENCFF232NZA 58 bp overlap

ChIP HUVEC-C GSE109625.EZH2.HUVEC-C 265 bp overlap

ChIP endothelial cell of umbilical vein ENCFF539AKL 487 bp overlap

ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 198 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 110 bp overlap

FOXD2 1 dataset

Motif DE_36h DE_36h-FOXD2_MA0847.4 11 bp overlap

JARID2 2 datasets

ChIP AMIPS6 GSE48516.JARID2.AMIPS6 217 bp overlap

ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 278 bp overlap

KDM4A 5 datasets

ChIP H1 ENCFF078LED 424 bp overlap

ChIP WA01 ENCSR000AVC.KDM4A.WA01 316 bp overlap

ChIP hiPSC_IA12 GSE106870.KDM4A.hiPSC_IA12 167 bp overlap

ChIP hiPSC_IIA11 GSE106870.KDM4A.hiPSC_IIA11 213 bp overlap

ChIP hiPSC_IID12 GSE106870.KDM4A.hiPSC_IID12 232 bp overlap

KDM5B 1 dataset

ChIP SUM185_SHCTCF GSE46055.KDM5B.SUM185_SHCTCF 133 bp overlap

KLF3 1 dataset

ChIP keratinocyte GSE140991.KLF3.keratinocyte 300 bp overlap

MAX 1 dataset

ChIP H1 ENCFF914VQY 357 bp overlap

MED1 1 dataset

ChIP MM1-S_JQ1_5000NM GSE49224.MED1.MM1-S_JQ1_5000NM 241 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 303 bp overlap

MYC 3 datasets

ChIP MM1-S_DMSO GSE36354.MYC.MM1-S_DMSO 175 bp overlap

ChIP U2OS_Doxy GSE44672.MYC.U2OS_Doxy 82 bp overlap

ChIP U2OS_HA-OmoMYCwt_Doxy GSE77328.MYC.U2OS_HA-OmoMYCwt_Doxy 85 bp overlap

NANOG 1 dataset

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 239 bp overlap

PCGF1 1 dataset

ChIP WA01 GSE104690.PCGF1.WA01 306 bp overlap

PHF8 1 dataset

ChIP H1 ENCFF427UFV 303 bp overlap

POLR2A 1 dataset

ChIP spleen ENCFF706IUS 236 bp overlap

POU5F1 2 datasets

ChIP DE_D1 DED1-OCT4_Batch_II 374 bp overlap

ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 235 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 404 bp overlap

RORC 2 datasets

ChIP HCC70 GSE126380.RORC.HCC70 459 bp overlap

ChIP HCC70_XY018 GSE126380.RORC.HCC70_XY018 449 bp overlap

RUNX1 1 dataset

ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 204 bp overlap

RYBP 1 dataset

ChIP WA01 GSE104690.RYBP.WA01 236 bp overlap

SMARCA4 1 dataset

ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-K785R 203 bp overlap

SP1 1 dataset

ChIP WTC11 ENCFF688PEU 469 bp overlap

SREBP2 2 datasets

ChIP HCC70 GSE126380.SREBP2.HCC70 412 bp overlap

ChIP HCC70_XY018 GSE126380.SREBP2.HCC70_XY018 437 bp overlap

SUPT5H 4 datasets

ChIP U2OS_siCtrl GSE115365.SUPT5H.U2OS_siCtrl 104 bp overlap

ChIP U2OS_siMYC GSE115365.SUPT5H.U2OS_siMYC 103 bp overlap

ChIP U2OS_siMYC_High GSE115365.SUPT5H.U2OS_siMYC_High 116 bp overlap

ChIP U2OS_siMYC_ON GSE115365.SUPT5H.U2OS_siMYC_ON 100 bp overlap

SUZ12 1 dataset

ChIP CRL-7250_shSS18 GSE108025.SUZ12.CRL-7250_shSS18 215 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 160 bp overlap

TBR1 1 dataset

Motif DE_36h DE_36h-TBR1_MA0802.2 9 bp overlap

TBX19 1 dataset

Motif DE_36h DE_36h-TBX19_MA0804.2 17 bp overlap

TBX20 1 dataset

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

TBX3 1 dataset

Motif DE_36h DE_36h-TBX3_MA1566.3 9 bp overlap

TBXT 1 dataset

Motif DE_36h DE_36h-TBXT_MA0009.2 16 bp overlap

TCF7 1 dataset

ChIP breast-organoid_BRCA2-mut GSE113909.TCF7.breast-organoid_BRCA2-mut 273 bp overlap

TRIM25 1 dataset

ChIP BT-549 GSE79588.TRIM25.BT-549 196 bp overlap

Tbx6 1 dataset

Motif DE_36h DE_36h-Tbx6_MA1567.3 9 bp overlap

Genome Browser