Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

38 transcription factors

BRD4 6 datasets

ChIP HeLa GSE151038.BRD4.HeLa 392 bp overlap

ChIP HeLa_JQ1 GSE151038.BRD4.HeLa_JQ1 878 bp overlap

ChIP RH4_shscr GSE140115.BRD4.RH4_shscr 477 bp overlap

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 451 bp overlap

ChIP cortical-interneuron_KCl-pos GSE117508.BRD4.cortical-interneuron_KCl-pos 333 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 203 bp overlap

CREB1 1 dataset

ChIP A-549 ENCSR000BRB.CREB1.A-549 119 bp overlap

CTNNB1 2 datasets

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 717 bp overlap

ChIP hiPSC_TT-neg_D2 GSE132532.CTNNB1.hiPSC_TT-neg_D2 256 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF364PUR 251 bp overlap

ChIP BLaER1 ENCFF896HSY 317 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 167 bp overlap

EP300 2 datasets

ChIP neural ENCSR843ZUP.EP300.neural 349 bp overlap

ChIP neural cell ENCFF442QNK 517 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 275 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 310 bp overlap

ChIP DE DE-FOXA2-2 325 bp overlap

GATA2 1 dataset

ChIP ESF GSE108408.GATA2.ESF 255 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 311 bp overlap

ChIP DE DE-GATA4-2 411 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 827 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 262 bp overlap

GATA6 11 datasets

ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 102 bp overlap

ChIP DE DE-GATA6-1 284 bp overlap

ChIP DE DE-GATA6-2 677 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 911 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 931 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 876 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 932 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 988 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 358 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 312 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 433 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 714 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 762 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 818 bp overlap

KLF4 1 dataset

ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 194 bp overlap

LHX2 1 dataset

ChIP retina_pigment GSE60024.LHX2.retina_pigment 180 bp overlap

MTA2 1 dataset

ChIP RH4 GSE155861.MTA2.RH4 180 bp overlap

MYCN 1 dataset

ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 139 bp overlap

NANOG 4 datasets

ChIP WA01 ENCSR000BMT.NANOG.WA01 117 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 331 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 246 bp overlap

ChIP hESC GSE18292.NANOG.hESC 96 bp overlap

NIPBL 1 dataset

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 338 bp overlap

NR4A1 1 dataset

Motif DE_12h DE_12h-NR4A1_MA1112.3 8 bp overlap

NR4A2 1 dataset

Motif DE_12h DE_12h-NR4A2_MA0160.3 8 bp overlap

ONECUT1 1 dataset

ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 294 bp overlap

PAX3-FOXO1 2 datasets

ChIP RH3 GSE83726.PAX3-FOXO1.RH3 198 bp overlap

ChIP RH4 GSE140115.PAX3-FOXO1.RH4 358 bp overlap

POU2F1 1 dataset

ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 153 bp overlap

POU5F1 1 dataset

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 198 bp overlap

RAD21 1 dataset

ChIP neural ENCSR198ZYJ.RAD21.neural 464 bp overlap

RBBP4 1 dataset

ChIP SCMC GSE155861.RBBP4.SCMC 290 bp overlap

REST 2 datasets

ChIP neural ENCSR000BTV.REST.neural 383 bp overlap

ChIP neural cell ENCFF882LXX 505 bp overlap

SMAD2 2 datasets

Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap

ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 366 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 878 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 915 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 889 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 870 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 912 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 342 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 253 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 177 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 408 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 699 bp overlap

SMC3 1 dataset

ChIP neural ENCSR404BPV.SMC3.neural 614 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 268 bp overlap

ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 270 bp overlap

ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 434 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 183 bp overlap

TFAP4 1 dataset

ChIP DLD-1 GSE46935.TFAP4.DLD-1 306 bp overlap

UBN1 1 dataset

ChIP HeLa GSE45024.UBN1.HeLa 166 bp overlap

Zfp335 1 dataset

Motif DE_12h DE_12h-Zfp335_MA2002.2 7 bp overlap

Genome Browser