chrX : 26,414,561 – 26,415,003
442 bp 67 TFs 0 linked genes
This 442 bp open chromatin element has no linked target genes and is bound by 67 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:26,409,561 – 26,420,003
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
67 transcription factors
Source
Cell type
ATF4 4 datasets
Motif DE_12h DE_12h-ATF4_MA0833.3 10 bp overlap
Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap
Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap
Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap
CDX1 1 dataset
Motif DE_36h DE_36h-CDX1_MA0878.3 10 bp overlap
CDX4 1 dataset
Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap
CEBPG 4 datasets
Motif DE_12h DE_12h-CEBPG_MA1636.2 10 bp overlap
Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap
Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap
Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap
CTCF 4 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_36h DE_36h-CTCF_MA0139.2 15 bp overlap
Motif DE_48h DE_48h-CTCF_MA0139.2 15 bp overlap
ChIP endodermal cell ENCFF471YCZ 319 bp overlap
Crx 3 datasets
Motif DE_12h DE_12h-Crx_MA0467.3 6 bp overlap
Motif DE_48h DE_48h-Crx_MA0467.3 6 bp overlap
Motif DE_60h DE_60h-Crx_MA0467.3 6 bp overlap
DUX4 7 datasets
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_12h DE_12h-DUX4_MA0468.1 11 bp overlap
Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap
DUXA 4 datasets
Motif DE_12h DE_12h-DUXA_MA0884.2 13 bp overlap
Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap
Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap
Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap
Ddit3::Cebpa 3 datasets
Motif DE_12h DE_12h-Ddit3Cebpa_MA0019.2 10 bp overlap
Motif DE_48h DE_48h-Ddit3Cebpa_MA0019.2 10 bp overlap
Motif DE_60h DE_60h-Ddit3Cebpa_MA0019.2 10 bp overlap
Dmbx1 3 datasets
Motif DE_12h DE_12h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_48h DE_48h-Dmbx1_MA0883.2 10 bp overlap
Motif DE_60h DE_60h-Dmbx1_MA0883.2 10 bp overlap
Dux 4 datasets
Motif DE_12h DE_12h-Dux_MA0611.3 11 bp overlap
Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap
Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap
Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap
E2F7 3 datasets
Motif DE_12h DE_12h-E2F7_MA0758.1 14 bp overlap
Motif DE_48h DE_48h-E2F7_MA0758.1 14 bp overlap
Motif DE_60h DE_60h-E2F7_MA0758.1 14 bp overlap
EBF1 3 datasets
Motif DE_12h DE_12h-EBF1_MA0154.5 11 bp overlap
Motif DE_36h DE_36h-EBF1_MA0154.5 11 bp overlap
Motif DE_48h DE_48h-EBF1_MA0154.5 11 bp overlap
EBF3 3 datasets
Motif DE_12h DE_12h-EBF3_MA1637.2 9 bp overlap
Motif DE_36h DE_36h-EBF3_MA1637.2 9 bp overlap
Motif DE_48h DE_48h-EBF3_MA1637.2 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 258 bp overlap
Ebf2 3 datasets
Motif DE_12h DE_12h-Ebf2_MA1604.2 9 bp overlap
Motif DE_36h DE_36h-Ebf2_MA1604.2 9 bp overlap
Motif DE_48h DE_48h-Ebf2_MA1604.2 9 bp overlap
Ebf4 3 datasets
Motif DE_12h DE_12h-Ebf4_MA2122.1 11 bp overlap
Motif DE_36h DE_36h-Ebf4_MA2122.1 11 bp overlap
Motif DE_48h DE_48h-Ebf4_MA2122.1 11 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 442 bp overlap
ChIP DE DE-FOXA2-2 398 bp overlap
GATA1::TAL1 4 datasets
Motif DE_12h DE_12h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_48h DE_48h-GATA1TAL1_MA0140.3 17 bp overlap
Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 442 bp overlap
ChIP DE DE-GATA4-2 433 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 294 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 328 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 410 bp overlap
ChIP DE DE-GATA6-2 425 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 380 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 372 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 376 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 398 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 376 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 366 bp overlap
GSC 3 datasets
Motif DE_12h DE_12h-GSC_MA0648.2 6 bp overlap
Motif DE_48h DE_48h-GSC_MA0648.2 6 bp overlap
Motif DE_60h DE_60h-GSC_MA0648.2 6 bp overlap
GSC2 3 datasets
Motif DE_12h DE_12h-GSC2_MA0891.2 6 bp overlap
Motif DE_48h DE_48h-GSC2_MA0891.2 6 bp overlap
Motif DE_60h DE_60h-GSC2_MA0891.2 6 bp overlap
Gfi1B 3 datasets
Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_48h DE_48h-Gfi1B_MA0483.2 10 bp overlap
Motif DE_60h DE_60h-Gfi1B_MA0483.2 10 bp overlap
HOXA10 1 dataset
Motif DE_36h DE_36h-HOXA10_MA0899.2 9 bp overlap
HOXB13 1 dataset
Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap
HOXD9 1 dataset
Motif DE_36h DE_36h-HOXD9_MA0913.3 9 bp overlap
JUN 5 datasets
Motif DE_12h DE_12h-JUN_MA0488.2 10 bp overlap
Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap
Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap
Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 343 bp overlap
KLF5 3 datasets
Motif DE_12h DE_12h-KLF5_MA0599.1 10 bp overlap
Motif DE_48h DE_48h-KLF5_MA0599.1 10 bp overlap
Motif DE_60h DE_60h-KLF5_MA0599.1 10 bp overlap
NFATC3 2 datasets
Motif DE_48h DE_48h-NFATC3_MA0625.3 6 bp overlap
Motif DE_60h DE_60h-NFATC3_MA0625.3 6 bp overlap
NFATC4 2 datasets
Motif DE_48h DE_48h-NFATC4_MA1525.3 9 bp overlap
Motif DE_60h DE_60h-NFATC4_MA1525.3 9 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 101 bp overlap
NFYA 4 datasets
Motif DE_12h DE_12h-NFYA_MA0060.4 8 bp overlap
Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap
Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap
Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap
NFYC 4 datasets
Motif DE_12h DE_12h-NFYC_MA1644.2 7 bp overlap
Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap
Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap
Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap
NR2C2 1 dataset
Motif DE_12h DE_12h-NR2C2_MA0504.2 14 bp overlap
Nfatc1 2 datasets
Motif DE_48h DE_48h-Nfatc1_MA0624.3 6 bp overlap
Motif DE_60h DE_60h-Nfatc1_MA0624.3 6 bp overlap
OTX1 3 datasets
Motif DE_12h DE_12h-OTX1_MA0711.2 6 bp overlap
Motif DE_48h DE_48h-OTX1_MA0711.2 6 bp overlap
Motif DE_60h DE_60h-OTX1_MA0711.2 6 bp overlap
OTX2 3 datasets
Motif DE_12h DE_12h-OTX2_MA0712.3 7 bp overlap
Motif DE_48h DE_48h-OTX2_MA0712.3 7 bp overlap
Motif DE_60h DE_60h-OTX2_MA0712.3 7 bp overlap
PITX1 3 datasets
Motif DE_12h DE_12h-PITX1_MA0682.3 6 bp overlap
Motif DE_48h DE_48h-PITX1_MA0682.3 6 bp overlap
Motif DE_60h DE_60h-PITX1_MA0682.3 6 bp overlap
PITX3 3 datasets
Motif DE_12h DE_12h-PITX3_MA0714.2 6 bp overlap
Motif DE_48h DE_48h-PITX3_MA0714.2 6 bp overlap
Motif DE_60h DE_60h-PITX3_MA0714.2 6 bp overlap
PPARD 1 dataset
Motif DE_12h DE_12h-PPARD_MA1550.2 14 bp overlap
PRDM9 2 datasets
Motif DE_12h DE_12h-PRDM9_MA1723.2 20 bp overlap
Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap
Pparg::Rxra 1 dataset
Motif DE_12h DE_12h-PpargRxra_MA0065.3 13 bp overlap
RARA 4 datasets
Motif DE_12h DE_12h-RARA_MA0729.1 18 bp overlap
Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap
Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap
Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap
RHOXF1 3 datasets
Motif DE_12h DE_12h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_48h DE_48h-RHOXF1_MA0719.2 6 bp overlap
Motif DE_60h DE_60h-RHOXF1_MA0719.2 6 bp overlap
SCRT1 2 datasets
Motif DE_48h DE_48h-SCRT1_MA0743.3 10 bp overlap
Motif DE_60h DE_60h-SCRT1_MA0743.3 10 bp overlap
SCRT2 2 datasets
Motif DE_48h DE_48h-SCRT2_MA0744.3 10 bp overlap
Motif DE_60h DE_60h-SCRT2_MA0744.3 10 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 378 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 385 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 350 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 415 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 442 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 411 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 418 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 442 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 327 bp overlap
SP5 3 datasets
Motif DE_12h DE_12h-SP5_MA1965.2 6 bp overlap
Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap
Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 217 bp overlap
THRB 1 dataset
Motif DE_12h DE_12h-THRB_MA1574.2 13 bp overlap
Wt1 4 datasets
Motif DE_12h DE_12h-Wt1_MA1627.2 10 bp overlap
Motif DE_36h DE_36h-Wt1_MA1627.2 10 bp overlap
Motif DE_48h DE_48h-Wt1_MA1627.2 10 bp overlap
Motif DE_60h DE_60h-Wt1_MA1627.2 10 bp overlap
ZIC1 5 datasets
Motif DE_12h DE_12h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_36h DE_36h-ZIC1_MA0696.1 14 bp overlap
Motif DE_48h DE_48h-ZIC1_MA0696.1 14 bp overlap
Motif DE_60h DE_60h-ZIC1_MA0696.1 14 bp overlap
ZIC4 1 dataset
Motif DE_36h DE_36h-ZIC4_MA0751.2 14 bp overlap
ZNF189 4 datasets
Motif DE_12h DE_12h-ZNF189_MA1725.2 9 bp overlap
Motif DE_36h DE_36h-ZNF189_MA1725.2 9 bp overlap
Motif DE_48h DE_48h-ZNF189_MA1725.2 9 bp overlap
Motif DE_60h DE_60h-ZNF189_MA1725.2 9 bp overlap
ZNF274 4 datasets
Motif DE_12h DE_12h-ZNF274_MA1592.2 12 bp overlap
Motif DE_36h DE_36h-ZNF274_MA1592.2 12 bp overlap
Motif DE_48h DE_48h-ZNF274_MA1592.2 12 bp overlap
Motif DE_60h DE_60h-ZNF274_MA1592.2 12 bp overlap
ZNF320 3 datasets
Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap
Motif DE_36h DE_36h-ZNF320_MA1976.2 20 bp overlap
Motif DE_48h DE_48h-ZNF320_MA1976.2 20 bp overlap
ZNF341 4 datasets
Motif DE_12h DE_12h-ZNF341_MA1655.2 8 bp overlap
Motif DE_36h DE_36h-ZNF341_MA1655.2 8 bp overlap
Motif DE_48h DE_48h-ZNF341_MA1655.2 8 bp overlap
Motif DE_60h DE_60h-ZNF341_MA1655.2 8 bp overlap
ZNF677 5 datasets
Motif DE_12h DE_12h-ZNF677_MA2101.1 12 bp overlap
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
Motif DE_36h DE_36h-ZNF677_MA2101.1 12 bp overlap
Motif DE_48h DE_48h-ZNF677_MA2101.1 12 bp overlap
Motif DE_60h DE_60h-ZNF677_MA2101.1 12 bp overlap
ZNF701 4 datasets
Motif DE_12h DE_12h-ZNF701_MA1987.2 17 bp overlap
Motif DE_36h DE_36h-ZNF701_MA1987.2 17 bp overlap
Motif DE_48h DE_48h-ZNF701_MA1987.2 17 bp overlap
Motif DE_60h DE_60h-ZNF701_MA1987.2 17 bp overlap
ZNF740 4 datasets
Motif DE_12h DE_12h-ZNF740_MA0753.3 10 bp overlap
Motif DE_36h DE_36h-ZNF740_MA0753.3 10 bp overlap
Motif DE_48h DE_48h-ZNF740_MA0753.3 10 bp overlap
Motif DE_60h DE_60h-ZNF740_MA0753.3 10 bp overlap
ZNF816 3 datasets
Motif DE_12h DE_12h-ZNF816_MA1719.2 15 bp overlap
Motif DE_48h DE_48h-ZNF816_MA1719.2 15 bp overlap
Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap
Zic1::Zic2 1 dataset
Motif DE_36h DE_36h-Zic1Zic2_MA1628.2 7 bp overlap
Zic2 1 dataset
Motif DE_36h DE_36h-Zic2_MA1629.2 9 bp overlap
Zic3 1 dataset
Motif DE_36h DE_36h-Zic3_MA0697.3 7 bp overlap
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