Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

46 transcription factors

ATF2 1 dataset

ChIP WA01 ENCSR000BQU.ATF2.WA01 134 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 194 bp overlap

CREB1 1 dataset

ChIP WA01 ENCSR000BSN.CREB1.WA01 105 bp overlap

CTCF 25 datasets

ChIP DND-41 ENCFF913MRA 246 bp overlap

ChIP DND41 ENCSR000AQU.CTCF.DND41 168 bp overlap

ChIP GM23338 ENCFF772DML 177 bp overlap

ChIP H1 ENCFF230QSV 165 bp overlap

ChIP H1 ENCFF414GZI 189 bp overlap

ChIP H1 ENCFF764RHO 215 bp overlap

ChIP H9 ENCFF152GTF 203 bp overlap

ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 184 bp overlap

ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 111 bp overlap

ChIP Loucy ENCSR464DKE.CTCF.Loucy 268 bp overlap

ChIP WA01 ENCSR000BNH.CTCF.WA01 161 bp overlap

ChIP WA01 ENCSR000DLK.CTCF.WA01 149 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 172 bp overlap

ChIP WERI-Rb-1 ENCFF349QKF 200 bp overlap

ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 148 bp overlap

ChIP endodermal cell ENCFF471YCZ 231 bp overlap

ChIP hESC_D0 GSE116862.CTCF.hESC_D0 181 bp overlap

ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 272 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 178 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 152 bp overlap

ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 183 bp overlap

ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 192 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 165 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 180 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 269 bp overlap

E2F6 2 datasets

ChIP H1 ENCFF785DWK 272 bp overlap

ChIP WA01 ENCSR000BSI.E2F6.WA01 162 bp overlap

EP300 1 dataset

ChIP WA01 ENCSR000BKK.EP300.WA01 136 bp overlap

ERG 1 dataset

ChIP SKNO-1 GSE23730.ERG.SKNO-1 80 bp overlap

EZH2 1 dataset

ChIP Hep-3B2-1-7 GSE128137.EZH2.Hep-3B2-1-7 272 bp overlap

EZH2_phosphoT487 1 dataset

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 98 bp overlap

FOXA1 1 dataset

ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 195 bp overlap

GABPA 1 dataset

ChIP WA01 ENCSR000BIW.GABPA.WA01 150 bp overlap

GATA2 1 dataset

ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 173 bp overlap

GATA4 1 dataset

ChIP DE DE-GATA4-2 240 bp overlap

GATA6 1 dataset

ChIP DE_D2 S55-DE-d2-GATA6-exp2 120 bp overlap

GLIS2 1 dataset

ChIP HEK293 ENCSR535DIA.GLIS2.HEK293 51 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 164 bp overlap

GTF3C2 1 dataset

ChIP H9 GSE94418.GTF3C2.H9 151 bp overlap

HDAC2 1 dataset

ChIP WA01 ENCSR000AVB.HDAC2.WA01 168 bp overlap

JUN 1 dataset

ChIP MDA-BoM-1833 GSE112444.JUN.MDA-BoM-1833 177 bp overlap

NANOG 2 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 272 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 154 bp overlap

NFKB1 1 dataset

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 157 bp overlap

POU5F1 7 datasets

ChIP BG03 GSE21614.POU5F1.BG03 146 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 245 bp overlap

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 272 bp overlap

ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 272 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 272 bp overlap

ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 253 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 272 bp overlap

PRDM14 1 dataset

ChIP NCCIT GSE71675.PRDM14.NCCIT 239 bp overlap

RAD21 12 datasets

ChIP H1 ENCFF698EWO 157 bp overlap

ChIP H1 ENCFF967OJF 183 bp overlap

ChIP WA09 GSE105028.RAD21.WA09 170 bp overlap

ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 175 bp overlap

ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 199 bp overlap

ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 114 bp overlap

ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 143 bp overlap

ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 156 bp overlap

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 272 bp overlap

ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 198 bp overlap

ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 147 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 174 bp overlap

RXRA 1 dataset

ChIP WA01 ENCSR000BJW.RXRA.WA01 163 bp overlap

SMAD1 1 dataset

ChIP BG03 GSE36578.SMAD1.BG03 117 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 201 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 272 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 272 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 234 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 272 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 224 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 139 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 272 bp overlap

SP4 2 datasets

ChIP HEK293 GSE76494.SP4.HEK293 222 bp overlap

ChIP WA01 ENCSR000BQV.SP4.WA01 150 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 245 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 111 bp overlap

TCF12 1 dataset

ChIP WA01 ENCSR000BIT.TCF12.WA01 110 bp overlap

TCF3 1 dataset

ChIP NPC GSE154479.TCF3.NPC 185 bp overlap

TP53 1 dataset

ChIP hESC_DAMAGED GSE39912.TP53.hESC_DAMAGED 231 bp overlap

TP63 1 dataset

ChIP breast-organoid GSE113909.TP63.breast-organoid 111 bp overlap

USF1 1 dataset

ChIP WA01 ENCSR000BIU.USF1.WA01 123 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 144 bp overlap

ZBTB48 1 dataset

ChIP U2OS_ZBTB48-KO GSE96776.ZBTB48.U2OS_ZBTB48-KO 272 bp overlap

ZIC2 1 dataset

ChIP HEK293 ENCFF033NQQ 155 bp overlap

ZNF143 1 dataset

ChIP WA01 ENCSR000EBW.ZNF143.WA01 113 bp overlap

ZNF341 1 dataset

ChIP HEK293 ENCSR185FOY.ZNF341.HEK293 236 bp overlap

ZNF770 1 dataset

ChIP HEK293 GSE76494.ZNF770.HEK293 75 bp overlap

ZNF778 2 datasets

ChIP HEK293 GSE76494.ZNF778.HEK293 226 bp overlap

ChIP HEK293T GSE78099.ZNF778.HEK293T 166 bp overlap

Genome Browser