chr21 : 37,008,843 37,009,149
306 bp 49 TFs 1 linked gene
This 306 bp open chromatin element is linked to RIPPLY3 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
RIPPLY3 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr21:37,003,843 – 37,014,149
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
BRD4 3 datasets
ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 188 bp overlap
ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 146 bp overlap
ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 265 bp overlap
CEBPD 1 dataset
ChIP Hep-G2 ENCSR000BQJ.CEBPD.Hep-G2 116 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 64 bp overlap
EGR1 1 dataset
ChIP Hep-G2 ENCSR026GSW.EGR1.Hep-G2 185 bp overlap
EMSY 1 dataset
ChIP K562 ENCFF511ZZZ 150 bp overlap
EP300 1 dataset
ChIP Hep-G2 ENCSR000BLW.EP300.Hep-G2 136 bp overlap
EZH2 1 dataset
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 173 bp overlap
FOXA1 5 datasets
ChIP HepG2 ENCFF740VZW 230 bp overlap
ChIP LNCaP_S2101-48H GSE114266.FOXA1.LNCaP_S2101-48H 208 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 205 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 142 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 306 bp overlap
FOXA2 4 datasets
ChIP DE DE-FOXA2-1 306 bp overlap
ChIP DE DE-FOXA2-2 306 bp overlap
ChIP HepG2 ENCFF533COJ 224 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 306 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 257 bp overlap
ChIP DE DE-GATA4-2 277 bp overlap
ChIP foregut GSE117136.GATA4.foregut 306 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 306 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 306 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 244 bp overlap
ChIP DE DE-GATA6-2 225 bp overlap
ChIP foregut GSE117136.GATA6.foregut 306 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 306 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 289 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 306 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 306 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 246 bp overlap
HDAC2 1 dataset
ChIP Hep-G2 ENCSR000BMC.HDAC2.Hep-G2 140 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 249 bp overlap
KDM1A 3 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 300 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 271 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 306 bp overlap
KDM4C 1 dataset
ChIP SW1783 GSE92483.KDM4C.SW1783 175 bp overlap
KLF5 1 dataset
ChIP HEK293_E419Q GSE88976.KLF5.HEK293_E419Q 113 bp overlap
KMT2A 1 dataset
ChIP KOPN-8 GSE83671.KMT2A.KOPN-8 306 bp overlap
MAFF 1 dataset
ChIP HepG2 ENCFF452YUT 50 bp overlap
MAFK 1 dataset
ChIP HepG2 ENCFF743ZOF 62 bp overlap
MAX 1 dataset
ChIP NCI-H128 GSE41105.MAX.NCI-H128 306 bp overlap
MYC 1 dataset
ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 252 bp overlap
NCOA3 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA3.MCF-7_E2 123 bp overlap
NKX2-1 3 datasets
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 306 bp overlap
ChIP NCI-H1819 GSE39998.NKX2-1.NCI-H1819 147 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 218 bp overlap
NKX3-1 1 dataset
ChIP islet ERP004003.NKX3-1.islet 172 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 236 bp overlap
ONECUT1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.ONECUT1.pancreatic-progenitor_PP1 108 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 306 bp overlap
PDX1 6 datasets
ChIP H9 ERP004206.PDX1.H9 196 bp overlap
ChIP hESC GSE58685.PDX1.hESC 186 bp overlap
ChIP hiPSC GSE125768.PDX1.hiPSC 306 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 306 bp overlap
ChIP islet ERP001456.PDX1.islet 141 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 306 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 193 bp overlap
PTBP1 1 dataset
ChIP Hep-G2 ENCSR156APP.PTBP1.Hep-G2 197 bp overlap
RNF2 1 dataset
ChIP WA09 GSE105028.RNF2.WA09 306 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 197 bp overlap
SCRT1 2 datasets
ChIP HEK293 ENCFF513YVP 144 bp overlap
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 284 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 306 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 284 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 171 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 115 bp overlap
YY1 1 dataset
ChIP Hep-G2 ENCSR000BNT.YY1.Hep-G2 133 bp overlap
ZBTB7A 2 datasets
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 93 bp overlap
ChIP Hep-G2 ENCSR000BQA.ZBTB7A.Hep-G2 128 bp overlap
ZBTB8A 2 datasets
ChIP HEK293 ENCFF303WRD 306 bp overlap
ChIP HEK293 ENCSR481FEC.ZBTB8A.HEK293 306 bp overlap
ZNF512 1 dataset
ChIP K562 ENCFF601EMZ 306 bp overlap
ZNF534 1 dataset
ChIP HEK293T GSE78099.ZNF534.HEK293T 219 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 266 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 59 bp overlap