chr18 : 69,985,340 – 69,985,729
389 bp 55 TFs 0 linked genes
This 389 bp open chromatin element has no linked target genes and is bound by 55 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:69,980,340 – 69,990,729
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
55 transcription factors
Source
Cell type
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 182 bp overlap
BRD4 1 dataset
ChIP CLL_patient4 GSE109411.BRD4.CLL_patient4 73 bp overlap
CBX2 1 dataset
ChIP HEK293T GSE34774.CBX2.HEK293T 221 bp overlap
CDX2 1 dataset
ChIP adult-duodenal-cell GSE115314.CDX2.adult-duodenal-cell 111 bp overlap
CTCF 48 datasets
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 202 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 201 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 176 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 136 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 144 bp overlap
ChIP GM12866 ENCSR000DRF.CTCF.GM12866 159 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 98 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 180 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 156 bp overlap
ChIP GM12873 ENCFF711LOS 227 bp overlap
ChIP GM23338 ENCFF531QOI 285 bp overlap
ChIP GM23338 ENCFF772DML 201 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 217 bp overlap
ChIP H1 ENCFF764RHO 77 bp overlap
ChIP H9 ENCFF152GTF 213 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 193 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 296 bp overlap
ChIP HEK293 ENCFF498RMM 240 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 106 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 189 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 180 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 112 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 113 bp overlap
ChIP HepG2 ENCFF127KUP 215 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 128 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 230 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 306 bp overlap
ChIP U-937 ERP008568.CTCF.U-937 226 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 191 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 179 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 167 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 125 bp overlap
ChIP endodermal cell ENCFF471YCZ 174 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 227 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 193 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 187 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 193 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 176 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 216 bp overlap
ChIP hiPSC_IID12 GSE106870.CTCF.hiPSC_IID12 145 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 237 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 148 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 158 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 185 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 167 bp overlap
ChIP neural progenitor cell ENCFF420RBO 284 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 199 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF274GAT 294 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 179 bp overlap
EED 1 dataset
ChIP ProEs GSE59087.EED.ProEs 389 bp overlap
EOMES 1 dataset
Motif DE_12h DE_12h-EOMES_MA0800.2 9 bp overlap
ESR1 5 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 222 bp overlap
ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 252 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 389 bp overlap
ChIP U2OS_100nM-E2 GSE151039.ESR1.U2OS_100nM-E2 57 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 83 bp overlap
FERD3L 1 dataset
Motif DE_12h DE_12h-FERD3L_MA1485.1 14 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 356 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 256 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 316 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 293 bp overlap
KLF11 1 dataset
Motif DE_12h DE_12h-KLF11_MA1512.2 10 bp overlap
KLF16 1 dataset
Motif DE_12h DE_12h-KLF16_MA0741.1 11 bp overlap
KLF9 1 dataset
Motif DE_12h DE_12h-KLF9_MA1107.3 11 bp overlap
LDB1 1 dataset
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 187 bp overlap
LMO2 1 dataset
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 183 bp overlap
MXI1 1 dataset
Motif DE_12h DE_12h-MXI1_MA1108.3 6 bp overlap
MYB 1 dataset
Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap
PAX3-FOXO1 1 dataset
ChIP RH4 GSE140115.PAX3-FOXO1.RH4 367 bp overlap
PKNOX2 1 dataset
Motif DE_12h DE_12h-PKNOX2_MA0783.1 12 bp overlap
POLR2A 1 dataset
ChIP A549 ENCFF748RAW 311 bp overlap
POU2F1::SOX2 1 dataset
Motif DE_12h DE_12h-POU2F1SOX2_MA1962.1 17 bp overlap
RAD21 8 datasets
ChIP H1 ENCFF698EWO 117 bp overlap
ChIP H1 ENCFF967OJF 222 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 101 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 185 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 190 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 211 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 168 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 204 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 112 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SMAD2-3 1 dataset
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 52 bp overlap
SP3 1 dataset
Motif DE_12h DE_12h-SP3_MA0746.3 11 bp overlap
SP8 1 dataset
Motif DE_12h DE_12h-SP8_MA0747.2 11 bp overlap
SP9 1 dataset
Motif DE_12h DE_12h-SP9_MA1564.2 10 bp overlap
SPI1 1 dataset
ChIP NCI-H929 GSE56857.SPI1.NCI-H929 54 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 187 bp overlap
TBR1 1 dataset
Motif DE_12h DE_12h-TBR1_MA0802.2 9 bp overlap
TBX1 1 dataset
Motif DE_12h DE_12h-TBX1_MA0805.1 8 bp overlap
TBX18 1 dataset
Motif DE_12h DE_12h-TBX18_MA1565.2 9 bp overlap
TBX2 1 dataset
Motif DE_12h DE_12h-TBX2_MA0688.2 9 bp overlap
TBX20 1 dataset
Motif DE_12h DE_12h-TBX20_MA0689.1 11 bp overlap
TBX21 1 dataset
Motif DE_12h DE_12h-TBX21_MA0690.3 10 bp overlap
TBX3 1 dataset
Motif DE_12h DE_12h-TBX3_MA1566.3 9 bp overlap
TEAD4 1 dataset
ChIP hMSC-TERT4 GSE140782.TEAD4.hMSC-TERT4 86 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 208 bp overlap
TGIF1 1 dataset
Motif DE_12h DE_12h-TGIF1_MA0796.1 12 bp overlap
TGIF2 1 dataset
Motif DE_12h DE_12h-TGIF2_MA0797.1 12 bp overlap
TGIF2LX 1 dataset
Motif DE_12h DE_12h-TGIF2LX_MA1571.1 12 bp overlap
TGIF2LY 1 dataset
Motif DE_12h DE_12h-TGIF2LY_MA1572.1 12 bp overlap
Tbx6 1 dataset
Motif DE_12h DE_12h-Tbx6_MA1567.3 9 bp overlap
ZBTB26 1 dataset
Motif DE_12h DE_12h-ZBTB26_MA1579.2 8 bp overlap
ZNF143 1 dataset
ChIP HeLa GSE39263.ZNF143.HeLa 207 bp overlap
ZNF547 1 dataset
ChIP HEK293 ENCSR909TSW.ZNF547.HEK293 235 bp overlap
ZNF707 1 dataset
Motif DE_12h DE_12h-ZNF707_MA1715.1 15 bp overlap
ZNF75A 1 dataset
Motif DE_12h DE_12h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_12h DE_12h-ZNF75D_MA1601.2 12 bp overlap
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