Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

ASH2L 1 dataset

ChIP WA01 ENCSR850KIP.ASH2L.WA01 248 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 221 bp overlap

BRD4 1 dataset

ChIP hESC GSE33281.BRD4.hESC 90 bp overlap

Bach1::Mafk 1 dataset

Motif DE_12h DE_12h-Bach1Mafk_MA0591.2 12 bp overlap

CTBP2 1 dataset

ChIP WA01 ENCSR000EUO.CTBP2.WA01 250 bp overlap

EGR1 2 datasets

ChIP H1 ENCFF451BLH 256 bp overlap

ChIP WA01 ENCSR000BJA.EGR1.WA01 143 bp overlap

ESR1 1 dataset

ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 216 bp overlap

GATA6 4 datasets

ChIP DE_D1 S14-DE-d1-GATA6-exp1 74 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 371 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 164 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 250 bp overlap

GFI1 1 dataset

Motif DE_12h DE_12h-GFI1_MA0038.3 11 bp overlap

Gfi1B 1 dataset

Motif DE_12h DE_12h-Gfi1B_MA0483.2 10 bp overlap

JUN 4 datasets

ChIP DE_D2 S54-DE-d2-JUN-exp2 262 bp overlap

ChIP ESC S24-ESC-d0-JUN-exp1 315 bp overlap

ChIP ESC S34-ESC-d0-JUN-exp2 271 bp overlap

ChIP HUES-8 GSE109524.JUN.HUES-8 363 bp overlap

KLF3 1 dataset

Motif ES_0h ES_0h-KLF3_MA1516.2 10 bp overlap

MAFK 1 dataset

Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap

MORC2 1 dataset

ChIP H9 GSE95374.MORC2.H9 345 bp overlap

Mafg 1 dataset

Motif DE_12h DE_12h-Mafg_MA0659.4 12 bp overlap

NANOG 9 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 117 bp overlap

ChIP H1 ENCFF747ZPQ 241 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 471 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 471 bp overlap

ChIP WA01 ENCSR000BMT.NANOG.WA01 157 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 471 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 416 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 284 bp overlap

ChIP hESC GSE18292.NANOG.hESC 117 bp overlap

NIPBL 3 datasets

ChIP hESC GSE64758.NIPBL.hESC 199 bp overlap

ChIP hESC_WNT3A_ACTIVIN GSE64758.NIPBL.hESC_WNT3A_ACTIVIN 358 bp overlap

ChIP hESC_activin GSE64758.NIPBL.hESC_activin 242 bp overlap

NRF1 6 datasets

ChIP H1 ENCFF582PEJ 245 bp overlap

ChIP K-562 ENCSR998AJK.NRF1.K-562 275 bp overlap

ChIP K-562 ENCSR837EYC.NRF1.K-562 151 bp overlap

ChIP K-562_Ab_R157-1-3D4 GSE97661.NRF1.K-562_Ab_R157-1-3D4 124 bp overlap

ChIP K-562_Ab_R157-1-3H3 GSE97661.NRF1.K-562_Ab_R157-1-3H3 114 bp overlap

ChIP K562 ENCFF130SGK 113 bp overlap

Nrf1 2 datasets

Motif DE_12h DE_12h-Nrf1_MA0506.3 12 bp overlap

Motif ES_0h ES_0h-Nrf1_MA0506.3 12 bp overlap

POU5F1 5 datasets

ChIP BG03 GSE21614.POU5F1.BG03 327 bp overlap

ChIP DE_D1 DED1-OCT4_Batch_II 343 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 417 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 116 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 209 bp overlap

POU5F1_M 1 dataset

ChIP DE_D1 DED1-OCT4-M_Batch_II 341 bp overlap

Pou5f1::Sox2 2 datasets

Motif DE_12h DE_12h-Pou5f1Sox2_MA0142.1 15 bp overlap

Motif ES_0h ES_0h-Pou5f1Sox2_MA0142.1 15 bp overlap

RBPJ 1 dataset

Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap

SIX4 1 dataset

ChIP WTC11 ENCFF891HYW 314 bp overlap

SMAD2 3 datasets

ChIP hESC GSE29422.SMAD2.hESC 186 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 465 bp overlap

ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 402 bp overlap

SMAD2-3 4 datasets

ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 358 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 382 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 366 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 404 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 347 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 471 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 273 bp overlap

ChIP ESC S23-ESC-d0-SMAD2_3-exp1 296 bp overlap

ChIP ESC S33-ESC-d0-SMAD2_3-exp2 316 bp overlap

SMAD3 4 datasets

ChIP BG03 GSE21614.SMAD3.BG03 268 bp overlap

ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 146 bp overlap

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 228 bp overlap

ChIP hESC GSE29422.SMAD3.hESC 350 bp overlap

SMAD4 1 dataset

ChIP hESC GSE29422.SMAD4.hESC 247 bp overlap

SMARCA4 2 datasets

ChIP hiPSC GSE124903.SMARCA4.hiPSC 393 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 174 bp overlap

SMARCB1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 170 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 204 bp overlap

SP1 1 dataset

ChIP H1 ENCFF263FUH 321 bp overlap

TAF1 1 dataset

ChIP WA01 ENCSR000BHO.TAF1.WA01 153 bp overlap

TEAD4 2 datasets

ChIP ESC S26-ESC-d0-TEAD4-exp1 377 bp overlap

ChIP H1 ENCFF778PAX 245 bp overlap

THRA 1 dataset

Motif DE_12h DE_12h-THRA_MA1969.2 18 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 122 bp overlap

USF2 1 dataset

ChIP WTC11 ENCFF139JAW 417 bp overlap

YY1 1 dataset

ChIP WA01 ENCSR000BKD.YY1.WA01 124 bp overlap

ZNF135 1 dataset

Motif DE_12h DE_12h-ZNF135_MA1587.1 14 bp overlap

ZNF207 1 dataset

ChIP WA09 GSE118632.ZNF207.WA09 234 bp overlap

ZNF460 1 dataset

Motif DE_12h DE_12h-ZNF460_MA1596.1 16 bp overlap

ZNF692 1 dataset

Motif ES_0h ES_0h-ZNF692_MA1986.2 8 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap

Gene	Dist. to TSS	Distance	Link type
LINC01926	at TSS	At TSS	Proximity
ZNF532	54.4 kb	Distal	Multiome+HiCAR
MALT1	137.1 kb	Distal	Multiome

Genome Browser