Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

51 transcription factors

ASXL3 2 datasets

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 926 bp overlap

ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 734 bp overlap

BAP1 2 datasets

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 903 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 465 bp overlap

BRD4 4 datasets

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 926 bp overlap

ChIP NCI-H1963_dBET6 GSE145028.BRD4.NCI-H1963_dBET6 747 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 926 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 926 bp overlap

CDX2 1 dataset

ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 449 bp overlap

CTNNB1 1 dataset

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 351 bp overlap

DAXX 1 dataset

ChIP PC-3 GSE68647.DAXX.PC-3 177 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 750 bp overlap

EP300 1 dataset

ChIP neural ENCSR843ZUP.EP300.neural 547 bp overlap

ESR1 4 datasets

ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 110 bp overlap

ChIP breast-cancer_3487 GSE126004.ESR1.breast-cancer_3487 232 bp overlap

ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 252 bp overlap

ChIP primary-endometrium-cancer_E1_DSG GSE114737.ESR1.primary-endometrium-cancer_E1_DSG 532 bp overlap

FLI1 5 datasets

ChIP A-673 GSE99959.FLI1.A-673 322 bp overlap

ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 517 bp overlap

ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 228 bp overlap

ChIP A-673_D14 GSE129155.FLI1.A-673_D14 158 bp overlap

ChIP A-673_D17 GSE129155.FLI1.A-673_D17 116 bp overlap

FOXA1 1 dataset

ChIP breast-cancer_3487 GSE126004.FOXA1.breast-cancer_3487 161 bp overlap

FOXA2 4 datasets

ChIP DE DE-FOXA2-1 926 bp overlap

ChIP DE DE-FOXA2-2 926 bp overlap

ChIP PC-3_GSK GSE148982.FOXA2.PC-3_GSK 197 bp overlap

ChIP PC-3_Veh GSE148982.FOXA2.PC-3_Veh 351 bp overlap

FOXK2 1 dataset

ChIP K-562 ENCSR508DQA.FOXK2.K-562 252 bp overlap

GATA1 1 dataset

ChIP K-562 GSE107726.GATA1.K-562 207 bp overlap

GATA2 1 dataset

ChIP TF1 GSE73207.GATA2.TF1 167 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 849 bp overlap

ChIP DE DE-GATA4-2 853 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 795 bp overlap

ChIP DE DE-GATA6-2 893 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 554 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 686 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 616 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 692 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 680 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 715 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 259 bp overlap

IKZF1 1 dataset

ChIP K-562 ENCSR395HWC.IKZF1.K-562 268 bp overlap

IRF4 1 dataset

ChIP B-cell GSE142493.IRF4.B-cell 349 bp overlap

MRTFB 2 datasets

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 162 bp overlap

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 224 bp overlap

MYBL2 1 dataset

ChIP A-673 GSE119971.MYBL2.A-673 881 bp overlap

MYC 1 dataset

ChIP NCI-H2171 GSE41105.MYC.NCI-H2171 462 bp overlap

NANOG 3 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 766 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 450 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 269 bp overlap

NUP98-HOXA9 1 dataset

ChIP HEK293-FT GSE62586.NUP98-HOXA9.HEK293-FT 397 bp overlap

POLR2A 1 dataset

ChIP neural cell ENCFF604SPB 167 bp overlap

POU5F1 1 dataset

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 262 bp overlap

PRDM6 1 dataset

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 197 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 756 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 671 bp overlap

RELA 1 dataset

ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 172 bp overlap

REST 4 datasets

ChIP neural ENCSR000BTV.REST.neural 420 bp overlap

ChIP neural ENCSR000BTV.REST.neural 119 bp overlap

ChIP neural cell ENCFF882LXX 505 bp overlap

ChIP neural cell ENCFF882LXX 436 bp overlap

RUNX1 1 dataset

ChIP THP-1 GSE79899.RUNX1.THP-1 185 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 756 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 587 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 492 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 388 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 422 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 272 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 581 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 737 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 201 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 140 bp overlap

SMARCA2 1 dataset

ChIP SK-N-MC_shGFP GSE94275.SMARCA2.SK-N-MC_shGFP 126 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 377 bp overlap

SMARCC1 3 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 269 bp overlap

ChIP SK-N-MC GSE94275.SMARCC1.SK-N-MC 114 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 175 bp overlap

SMC1 1 dataset

ChIP HCAEC GSE101921.SMC1.HCAEC 335 bp overlap

SMC1A-B 1 dataset

ChIP TC-32 GSE115250.SMC1A-B.TC-32 276 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 711 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 824 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 302 bp overlap

SPI1 2 datasets

ChIP DC_LPS GSE123347.SPI1.DC_LPS 190 bp overlap

ChIP U-937 GSE128834.SPI1.U-937 170 bp overlap

SS18 1 dataset

ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 223 bp overlap

STAT3 1 dataset

ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 130 bp overlap

T 3 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 265 bp overlap

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 165 bp overlap

ZNF205 1 dataset

ChIP HEK293T GSE78099.ZNF205.HEK293T 247 bp overlap

ZNF260 1 dataset

ChIP HEK293 GSE76494.ZNF260.HEK293 175 bp overlap

ZNF532 1 dataset

ChIP NMC24335 GSE96775.ZNF532.NMC24335 84 bp overlap

Gene	Dist. to TSS	Distance	Link type
ATP8B1	53.3 kb	Distal	Multiome
ENSG00000267787	160.7 kb	Distal	Multiome
NEDD4L	187.6 kb	Distal	Multiome
ATP8B1-AS1	226.3 kb	Distal	Multiome+HiCAR
NARS1	234.8 kb	Distal	Multiome+HiCAR
FECH	269.9 kb	Distal	Multiome

Genome Browser