chr2 : 6,073,236 6,073,372
136 bp 33 TFs 0 linked genes
This 136 bp open chromatin element has no linked target genes and is bound by 33 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:6,068,236 – 6,078,372
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ASXL3 1 dataset
ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 136 bp overlap
BRD4 4 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 136 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 136 bp overlap
ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 136 bp overlap
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 136 bp overlap
CHD2 1 dataset
ChIP SK-N-SH ENCSR274SLQ.CHD2.SK-N-SH 133 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 136 bp overlap
CSDC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 136 bp overlap
CTCF 1 dataset
ChIP dorsolateral prefrontal cortex ENCFF433UFM 51 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 136 bp overlap
ChIP neural cell ENCFF442QNK 91 bp overlap
EZH2 1 dataset
ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 52 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 65 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 136 bp overlap
ChIP SK-N-SH ENCFF764OZD 104 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 108 bp overlap
GATA3 2 datasets
ChIP SH-SY5Y ENCFF475HYF 136 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 136 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 136 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 136 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 136 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 136 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 97 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 136 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 90 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR507BWM.GLIS3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 136 bp overlap
HAND2 1 dataset
ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 131 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 70 bp overlap
KDM1A 1 dataset
ChIP SH-SY5Y_B3 GSE58258.KDM1A.SH-SY5Y_B3 78 bp overlap
MAML3 2 datasets
ChIP SK-N-SH GSE69119.MAML3.SK-N-SH 136 bp overlap
ChIP SK-N-SH_RA GSE69119.MAML3.SK-N-SH_RA 67 bp overlap
MXI1 1 dataset
ChIP SK-N-SH ENCFF746HVJ 136 bp overlap
MYCN 1 dataset
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 136 bp overlap
PHOX2B 1 dataset
ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 79 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 136 bp overlap
RAD21 2 datasets
ChIP SK-N-SH ENCFF747MAS 136 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 100 bp overlap
RBBP4 1 dataset
ChIP SCMC GSE155861.RBBP4.SCMC 136 bp overlap
RCOR1 1 dataset
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 136 bp overlap
REST 1 dataset
ChIP neural cell ENCFF882LXX 64 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 136 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 136 bp overlap
SMARCA4 1 dataset
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 136 bp overlap
SMC3 1 dataset
ChIP neural cell ENCFF795YGY 69 bp overlap
TAF1 1 dataset
ChIP neural ENCSR000BTX.TAF1.neural 125 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 52 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 120 bp overlap