chr2 : 5,189,762 – 5,190,312
550 bp 43 TFs 0 linked genes
This 550 bp open chromatin element has no linked target genes and is bound by 43 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:5,184,762 – 5,195,312
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
43 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 200 bp overlap
AR 7 datasets
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 139 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 158 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 145 bp overlap
ChIP breast-cancer_ENOB-995 GSE128018.AR.breast-cancer_ENOB-995 303 bp overlap
ChIP prostate-cancer_PDX_35 GSE130408.AR.prostate-cancer_PDX_35 113 bp overlap
ChIP prostate-cancer_PDX_92 GSE130408.AR.prostate-cancer_PDX_92 124 bp overlap
ChIP prostate_P23_T GSE130408.AR.prostate_P23_T 167 bp overlap
ASH2L 1 dataset
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 150 bp overlap
BNC2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR754GYI.BNC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 279 bp overlap
BRD2 2 datasets
ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 485 bp overlap
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 406 bp overlap
BRD4 8 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 319 bp overlap
ChIP PC-3 GSE137207.BRD4.PC-3 472 bp overlap
ChIP PC-3_GDC-R GSE137207.BRD4.PC-3_GDC-R 550 bp overlap
ChIP PC-3_GDC-R_SAHA GSE137207.BRD4.PC-3_GDC-R_SAHA 550 bp overlap
ChIP SUM159PT_shMYC_dox_48h GSE87418.BRD4.SUM159PT_shMYC_dox_48h 317 bp overlap
ChIP SUM185_DMSO GSE63581.BRD4.SUM185_DMSO 136 bp overlap
ChIP SUM229PE_pos_DMSO_24h GSE87418.BRD4.SUM229PE_pos_DMSO_24h 272 bp overlap
ChIP retina_AB1-FW13 GSE86981.BRD4.retina_AB1-FW13 256 bp overlap
CDK9 5 datasets
ChIP A-375 GSE128080.CDK9.A-375 149 bp overlap
ChIP A-375_1726plus GSE128080.CDK9.A-375_1726plus 154 bp overlap
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 158 bp overlap
ChIP A-375_DMSO GSE68052.CDK9.A-375_DMSO 528 bp overlap
ChIP A-375_DMSO GSE57431.CDK9.A-375_DMSO 287 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 464 bp overlap
CREBBP 2 datasets
ChIP PC-3 GSE147455.CREBBP.PC-3 146 bp overlap
ChIP PC-3_GDC-resist GSE147455.CREBBP.PC-3_GDC-resist 280 bp overlap
DAXX 1 dataset
ChIP PC-3 GSE68647.DAXX.PC-3 139 bp overlap
ELF1 1 dataset
ChIP SK-N-MC_SHFLI_96H GSE61944.ELF1.SK-N-MC_SHFLI_96H 265 bp overlap
EP300 1 dataset
ChIP PC-3 GSE147455.EP300.PC-3 277 bp overlap
ERG 9 datasets
ChIP VCaP GSE28950.ERG.VCaP 190 bp overlap
ChIP VCaP GSE83650.ERG.VCaP 168 bp overlap
ChIP VCaP GSE98809.ERG.VCaP 168 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 131 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 202 bp overlap
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 233 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 206 bp overlap
ChIP VCaP_shERG GSE110655.ERG.VCaP_shERG 231 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 171 bp overlap
ESR1 7 datasets
ChIP MCF-7 GSE76893.ESR1.MCF-7 114 bp overlap
ChIP MCF-7_E2 GSE59530.ESR1.MCF-7_E2 180 bp overlap
ChIP MCF-7_TamR GSE128445.ESR1.MCF-7_TamR 159 bp overlap
ChIP MCF-7_estradiol-DHT_4h GSE99626.ESR1.MCF-7_estradiol-DHT_4h 189 bp overlap
ChIP MCF-7_jc5850 GSE126004.ESR1.MCF-7_jc5850 158 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 183 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 159 bp overlap
ETV1 2 datasets
ChIP A-375 GSE80443.ETV1.A-375 275 bp overlap
ChIP COLO-800 GSE80443.ETV1.COLO-800 195 bp overlap
FLI1 9 datasets
ChIP A-673 GSE99959.FLI1.A-673 254 bp overlap
ChIP A-673_1_KRAB_GFP GSE106914.FLI1.A-673_1_KRAB_GFP 289 bp overlap
ChIP A-673_2_KRAB_eSOX2_1 GSE106914.FLI1.A-673_2_KRAB_eSOX2_1 251 bp overlap
ChIP A-673_D10 GSE129155.FLI1.A-673_D10 143 bp overlap
ChIP A-673_D11 GSE129155.FLI1.A-673_D11 235 bp overlap
ChIP A-673_D14 GSE129155.FLI1.A-673_D14 321 bp overlap
ChIP A-673_D17 GSE129155.FLI1.A-673_D17 241 bp overlap
ChIP A-673_D7 GSE129155.FLI1.A-673_D7 204 bp overlap
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 149 bp overlap
FOXA1 69 datasets
ChIP A-549 ENCSR000BRD.FOXA1.A-549 131 bp overlap
ChIP A-549 ENCSR000BPX.FOXA1.A-549 112 bp overlap
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 255 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 180 bp overlap
ChIP MCF-7 ENCFF465LTH 110 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 188 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 147 bp overlap
ChIP MCF-7 GSE140185.FOXA1.MCF-7 163 bp overlap
ChIP MCF-7 GSE59530.FOXA1.MCF-7 158 bp overlap
ChIP MCF-7 GSE81714.FOXA1.MCF-7 152 bp overlap
ChIP MCF-7 ENCSR126YEB.FOXA1.MCF-7 144 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 132 bp overlap
ChIP MCF-7 GSE60270.FOXA1.MCF-7 116 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 150 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 124 bp overlap
ChIP MCF-7_DEX GSE72249.FOXA1.MCF-7_DEX 130 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 126 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 187 bp overlap
ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 148 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 108 bp overlap
ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 137 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 92 bp overlap
ChIP MCF-7_JC4690 GSE126004.FOXA1.MCF-7_JC4690 197 bp overlap
ChIP MCF-7_JC4693 GSE126004.FOXA1.MCF-7_JC4693 168 bp overlap
ChIP MCF-7_JC4696 GSE126004.FOXA1.MCF-7_JC4696 115 bp overlap
ChIP MCF-7_JC4697 GSE126004.FOXA1.MCF-7_JC4697 233 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 193 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 135 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 136 bp overlap
ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 151 bp overlap
ChIP MCF-7_TamR GSE128445.FOXA1.MCF-7_TamR 547 bp overlap
ChIP MCF-7_estrogen_ab1 GSE112969.FOXA1.MCF-7_estrogen_ab1 206 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 265 bp overlap
ChIP MCF-7_siFEN1 GSE95302.FOXA1.MCF-7_siFEN1 126 bp overlap
ChIP MCF-7_vehicle_ab1 GSE112969.FOXA1.MCF-7_vehicle_ab1 145 bp overlap
ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 245 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 162 bp overlap
ChIP NCI-H3122 GSE39998.FOXA1.NCI-H3122 193 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 267 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 382 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 481 bp overlap
ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 126 bp overlap
ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 111 bp overlap
ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 145 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 426 bp overlap
ChIP VCaP_ETOH24H GSE58428.FOXA1.VCaP_ETOH24H 115 bp overlap
ChIP ZR-75-1_estrogen_ab1 GSE112969.FOXA1.ZR-75-1_estrogen_ab1 203 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 226 bp overlap
ChIP ZR-75-1_estrogen_ab2 GSE112969.FOXA1.ZR-75-1_estrogen_ab2 252 bp overlap
ChIP ZR-75-1_vehicle_ab1 GSE112969.FOXA1.ZR-75-1_vehicle_ab1 245 bp overlap
ChIP ZR-75-1_vehicle_ab2 GSE112969.FOXA1.ZR-75-1_vehicle_ab2 550 bp overlap
ChIP ZR751 GSE72249.FOXA1.ZR751 550 bp overlap
ChIP ZR751_DEX GSE72249.FOXA1.ZR751_DEX 550 bp overlap
ChIP ZR751_E2 GSE72249.FOXA1.ZR751_E2 550 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 88 bp overlap
ChIP breast-cancer_ENOB-2852 GSE128018.FOXA1.breast-cancer_ENOB-2852 150 bp overlap
ChIP breast-cancer_Herceptin-ICI GSE101407.FOXA1.breast-cancer_Herceptin-ICI 140 bp overlap
ChIP breast-cancer_ICI GSE101407.FOXA1.breast-cancer_ICI 193 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 164 bp overlap
ChIP breast-cancer_heregulin GSE101407.FOXA1.breast-cancer_heregulin 264 bp overlap
ChIP breast-cancer_heregulin-ICI GSE101407.FOXA1.breast-cancer_heregulin-ICI 232 bp overlap
ChIP breast_tumor_Female_1 GSE104399.FOXA1.breast_tumor_Female_1 270 bp overlap
ChIP breast_tumor_Female_2 GSE104399.FOXA1.breast_tumor_Female_2 180 bp overlap
ChIP breast_tumor_Male_14 GSE104399.FOXA1.breast_tumor_Male_14 136 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 550 bp overlap
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 262 bp overlap
ChIP primary-breast-cancer_B2_DSG GSE114737.FOXA1.primary-breast-cancer_B2_DSG 198 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 156 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 178 bp overlap
FOXA2 9 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 226 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 303 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 258 bp overlap
ChIP DE DE-FOXA2-1 550 bp overlap
ChIP DE DE-FOXA2-2 550 bp overlap
ChIP HepG2 ENCFF570ABM 105 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 176 bp overlap
ChIP PC-3_GSK GSE148982.FOXA2.PC-3_GSK 141 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 550 bp overlap
FOXP2 1 dataset
ChIP SK-N-MC ENCFF865YOS 215 bp overlap
GATA2 1 dataset
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 296 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 531 bp overlap
ChIP DE DE-GATA4-2 550 bp overlap
ChIP foregut GSE117136.GATA4.foregut 523 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 550 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 550 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 470 bp overlap
ChIP DE DE-GATA6-2 524 bp overlap
ChIP foregut GSE117136.GATA6.foregut 491 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 530 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 483 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 473 bp overlap
HDAC1 1 dataset
ChIP PC-3 GSE147455.HDAC1.PC-3 217 bp overlap
HDAC2 2 datasets
ChIP PC-3 GSE147455.HDAC2.PC-3 328 bp overlap
ChIP PC-3_GDC-resist GSE147455.HDAC2.PC-3_GDC-resist 343 bp overlap
HOXB13 4 datasets
ChIP prostate-cancer_PDX_92 GSE130408.HOXB13.prostate-cancer_PDX_92 71 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 161 bp overlap
ChIP prostate_P23_T GSE130408.HOXB13.prostate_P23_T 291 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 173 bp overlap
IRF1 1 dataset
ChIP HAEC_IL1b_4h GSE89970.IRF1.HAEC_IL1b_4h 139 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 216 bp overlap
MED25 1 dataset
ChIP PC-3_FLAG GSE133445.MED25.PC-3_FLAG 219 bp overlap
MRTFB 1 dataset
ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 324 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 196 bp overlap
NKX2-1 2 datasets
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 186 bp overlap
ChIP NCI-H3122 GSE39998.NKX2-1.NCI-H3122 181 bp overlap
NR3C1 5 datasets
ChIP MCF-7 GSE152203.NR3C1.MCF-7 154 bp overlap
ChIP MCF-7 GSE152203.NR3C1.MCF-7 187 bp overlap
ChIP MCF-7_E2_Dex GSE81510.NR3C1.MCF-7_E2_Dex 154 bp overlap
ChIP MCF-7_ICI_Dex GSE81510.NR3C1.MCF-7_ICI_Dex 190 bp overlap
ChIP ZR751_DEX GSE72249.NR3C1.ZR751_DEX 169 bp overlap
NR3C1_mut 1 dataset
ChIP MCF-7_ICI_Dex GSE81510.NR3C1_mut.MCF-7_ICI_Dex 291 bp overlap
NRIP1 1 dataset
ChIP MCF-7 ERP005838.NRIP1.MCF-7 108 bp overlap
PAX5 1 dataset
ChIP fetal_testis GSE100639.PAX5.fetal_testis 166 bp overlap
PGR 2 datasets
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 149 bp overlap
ChIP breast_tumor_Male_30 GSE104399.PGR.breast_tumor_Male_30 177 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 200 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 415 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 442 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 160 bp overlap
SMARCA4 1 dataset
ChIP A-549_AG15685 GSE132290.SMARCA4.A-549_AG15685 216 bp overlap
SMARCC1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 174 bp overlap
STAT3 3 datasets
ChIP MCF-7 GSE152203.STAT3.MCF-7 120 bp overlap
ChIP MCF-7_jc5840 GSE126004.STAT3.MCF-7_jc5840 263 bp overlap
ChIP NCI-H358 GSE79707.STAT3.NCI-H358 263 bp overlap
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