chr18 : 26,703,623 26,703,921
298 bp 49 TFs 1 linked gene
This 298 bp open chromatin element is linked to PCAT18 and is bound by 49 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PCAT18 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr18:26,698,623 – 26,708,921
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
49 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 217 bp overlap
AR 8 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 176 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 248 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 70 bp overlap
ChIP breast_tumor_Male_26 GSE104399.AR.breast_tumor_Male_26 252 bp overlap
ChIP breast_tumor_Male_28 GSE104399.AR.breast_tumor_Male_28 85 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.AR.primary-prostate-cancer_P2_DSG 186 bp overlap
ChIP prostate_1730_T GSE130408.AR.prostate_1730_T 130 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 160 bp overlap
ASCL1 1 dataset
ChIP NCI-H889 GSE69394.ASCL1.NCI-H889 161 bp overlap
BCL11A 2 datasets
ChIP CD34_Day3_30min GSE104676.BCL11A.CD34_Day3_30min 56 bp overlap
ChIP CD34_Day5_30min GSE104676.BCL11A.CD34_Day5_30min 53 bp overlap
BRD3 2 datasets
ChIP THP-1_DMSO GSE138084.BRD3.THP-1_DMSO 110 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD3.THP-1_iBET-BD2 221 bp overlap
BRD4 6 datasets
ChIP Jurkat GSE83777.BRD4.Jurkat 237 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 298 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 188 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-744 195 bp overlap
ChIP THP-1_iBET-BD1 GSE138084.BRD4.THP-1_iBET-BD1 211 bp overlap
ChIP THP-1_iBET-BD2 GSE138084.BRD4.THP-1_iBET-BD2 290 bp overlap
CDK7 2 datasets
ChIP Jurkat GSE83777.CDK7.Jurkat 284 bp overlap
ChIP Jurkat GSE50622.CDK7.Jurkat 178 bp overlap
CDK8 1 dataset
ChIP SET-2 GSE65138.CDK8.SET-2 132 bp overlap
CTCF 1 dataset
ChIP colon_transverse ENCSR102CSD.CTCF.colon_transverse 55 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 206 bp overlap
ERG 1 dataset
ChIP Jurkat GSE49091.ERG.Jurkat 111 bp overlap
ESR1 21 datasets
ChIP Ishikawa_ETV4-KO1 GSE129803.ESR1.Ishikawa_ETV4-KO1 69 bp overlap
ChIP Ishikawa_ETV4-KO1_Mili GSE129803.ESR1.Ishikawa_ETV4-KO1_Mili 115 bp overlap
ChIP Ishikawa_ETV4-OE GSE129803.ESR1.Ishikawa_ETV4-OE 135 bp overlap
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 220 bp overlap
ChIP T-47D GSE148277.ESR1.T-47D 179 bp overlap
ChIP T-47D_D538G_E2 GSE148277.ESR1.T-47D_D538G_E2 205 bp overlap
ChIP T-47D_PROG GSE68355.ESR1.T-47D_PROG 126 bp overlap
ChIP T-47D_R5020 GSE68355.ESR1.T-47D_R5020 145 bp overlap
ChIP T-47D_Y537S GSE148277.ESR1.T-47D_Y537S 208 bp overlap
ChIP T-47D_Y537S_E2 GSE148277.ESR1.T-47D_Y537S_E2 289 bp overlap
ChIP breast_tumor_BADOUTCOME GSE40867.ESR1.breast_tumor_BADOUTCOME 146 bp overlap
ChIP breast_tumor_Female_6 GSE104399.ESR1.breast_tumor_Female_6 176 bp overlap
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 254 bp overlap
ChIP breast_tumor_Male_11 GSE104399.ESR1.breast_tumor_Male_11 278 bp overlap
ChIP breast_tumor_Male_15 GSE104399.ESR1.breast_tumor_Male_15 193 bp overlap
ChIP breast_tumor_Male_20 GSE104399.ESR1.breast_tumor_Male_20 257 bp overlap
ChIP breast_tumor_Male_21 GSE104399.ESR1.breast_tumor_Male_21 168 bp overlap
ChIP breast_tumor_Male_26 GSE104399.ESR1.breast_tumor_Male_26 298 bp overlap
ChIP breast_tumor_Male_28 GSE104399.ESR1.breast_tumor_Male_28 180 bp overlap
ChIP breast_tumor_Male_30 GSE104399.ESR1.breast_tumor_Male_30 89 bp overlap
ChIP endometrioid-adenocarcinoma_tumor_2 GSE94031.ESR1.endometrioid-adenocarcinoma_tumor_2 200 bp overlap
ESR1_Y537C 1 dataset
ChIP SUM44PE__ESR1_mutant_LTED GSE100074.ESR1_Y537C.SUM44PE__ESR1_mutant_LTED 298 bp overlap
ESR1_Y537N 2 datasets
ChIP MCF-7_dox GSE94493.ESR1_Y537N.MCF-7_dox 203 bp overlap
ChIP MCF-7_dox_E2 GSE94493.ESR1_Y537N.MCF-7_dox_E2 154 bp overlap
FOXA1 18 datasets
ChIP 22Rv1 GSE96652.FOXA1.22Rv1 173 bp overlap
ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 197 bp overlap
ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 125 bp overlap
ChIP MCF-7_estrogen_ab2 GSE112969.FOXA1.MCF-7_estrogen_ab2 268 bp overlap
ChIP T-47D_DMSO GSE84593.FOXA1.T-47D_DMSO 139 bp overlap
ChIP ZR751_E2_TAM ERP000380.FOXA1.ZR751_E2_TAM 158 bp overlap
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 298 bp overlap
ChIP breast-cancer_ENOB-2849 GSE128018.FOXA1.breast-cancer_ENOB-2849 244 bp overlap
ChIP breast-cancer_Veh-131 GSE128018.FOXA1.breast-cancer_Veh-131 211 bp overlap
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 298 bp overlap
ChIP breast-cancer_Veh-2858 GSE128018.FOXA1.breast-cancer_Veh-2858 298 bp overlap
ChIP breast-cancer_Veh-2860 GSE128018.FOXA1.breast-cancer_Veh-2860 175 bp overlap
ChIP breast_tumor_Male_19 GSE104399.FOXA1.breast_tumor_Male_19 298 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 298 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 211 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 80 bp overlap
ChIP prostate_2483_T GSE130408.FOXA1.prostate_2483_T 213 bp overlap
ChIP prostate_P23_T GSE130408.FOXA1.prostate_P23_T 159 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 298 bp overlap
ChIP DE DE-FOXA2-2 298 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 191 bp overlap
GATA3 1 dataset
ChIP breast_tumor_Male_21 GSE104399.GATA3.breast_tumor_Male_21 298 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 206 bp overlap
ChIP DE DE-GATA4-2 256 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 261 bp overlap
ChIP DE DE-GATA6-2 253 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 223 bp overlap
ChIP foregut GSE117136.GATA6.foregut 283 bp overlap
HOXB13 3 datasets
ChIP prostate_2030_T GSE130408.HOXB13.prostate_2030_T 139 bp overlap
ChIP prostate_2483_T GSE130408.HOXB13.prostate_2483_T 298 bp overlap
ChIP prostate_P19_T GSE130408.HOXB13.prostate_P19_T 88 bp overlap
JMJD1C 1 dataset
ChIP HL-60 GSE63484.JMJD1C.HL-60 109 bp overlap
KDM1A 1 dataset
ChIP NB4_DMSO GSE128528.KDM1A.NB4_DMSO 196 bp overlap
KLF1 1 dataset
ChIP HEK293 ENCSR859BMR.KLF1.HEK293 259 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 180 bp overlap
KLF5 1 dataset
ChIP KATO-III GSE51705.KLF5.KATO-III 148 bp overlap
MYB 4 datasets
ChIP DU528 GSE94000.MYB.DU528 187 bp overlap
ChIP Jurkat GSE59657.MYB.Jurkat 291 bp overlap
ChIP MOLT-3 GSE59657.MYB.MOLT-3 196 bp overlap
ChIP PF-382 GSE94000.MYB.PF-382 298 bp overlap
MYC 2 datasets
ChIP NB4 ENCFF142PRP 202 bp overlap
ChIP NB4 ENCFF142PRP 214 bp overlap
NCOA1 1 dataset
ChIP MCF-7_E2 ERP000901.NCOA1.MCF-7_E2 119 bp overlap
NFE2 1 dataset
ChIP K562 ENCFF047YKA 256 bp overlap
NFKB1 1 dataset
ChIP MCF10A-Er-Src_TAM GSE115597.NFKB1.MCF10A-Er-Src_TAM 119 bp overlap
NOTCH1 2 datasets
ChIP CUTLL1 GSE29600.NOTCH1.CUTLL1 85 bp overlap
ChIP HPBALL GSE39263.NOTCH1.HPBALL 221 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
PDX1 2 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 50 bp overlap
ChIP islet ERP001456.PDX1.islet 63 bp overlap
PGR 7 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 211 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 181 bp overlap
ChIP T-47D_R5020-A1 GSE126859.PGR.T-47D_R5020-A1 108 bp overlap
ChIP T-47D_R5020-MTVL GSE126859.PGR.T-47D_R5020-MTVL 124 bp overlap
ChIP breast_tumor_Male_26 GSE104399.PGR.breast_tumor_Male_26 298 bp overlap
ChIP breast_tumor_Male_28 GSE104399.PGR.breast_tumor_Male_28 298 bp overlap
ChIP breast_tumor_Male_30 GSE104399.PGR.breast_tumor_Male_30 114 bp overlap
POLR2A 4 datasets
ChIP NB4 ENCFF780KAX 298 bp overlap
ChIP lower leg skin ENCFF687RJC 77 bp overlap
ChIP stomach ENCFF607ZPU 282 bp overlap
ChIP stomach ENCFF820WZN 168 bp overlap
POU5F1 1 dataset
ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 224 bp overlap
RUNX1 1 dataset
ChIP Jurkat GSE68976.RUNX1.Jurkat 203 bp overlap
RUNX2 1 dataset
ChIP Karpas-45 GSE151819.RUNX2.Karpas-45 191 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 298 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 145 bp overlap
SMARCA4 6 datasets
ChIP CTV-1_DSG GSE128835.SMARCA4.CTV-1_DSG 290 bp overlap
ChIP CTV-1_DSG_SPI1-mut GSE128835.SMARCA4.CTV-1_DSG_SPI1-mut 298 bp overlap
ChIP CTV-1_FLAG GSE128835.SMARCA4.CTV-1_FLAG 194 bp overlap
ChIP CTV-1_FLAG_SPI1-mut GSE128835.SMARCA4.CTV-1_FLAG_SPI1-mut 179 bp overlap
ChIP CTV-1_delA GSE128835.SMARCA4.CTV-1_delA 219 bp overlap
ChIP CTV-1_delQ GSE128835.SMARCA4.CTV-1_delQ 184 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 151 bp overlap
ZBTB20 2 datasets
ChIP HEK293 ENCFF524ADK 298 bp overlap
ChIP HEK293 ENCSR460MBI.ZBTB20.HEK293 175 bp overlap
ZBTB40 3 datasets
ChIP GM12878 ENCFF346DYM 131 bp overlap
ChIP GM12878 ENCSR189YYK.ZBTB40.GM12878 80 bp overlap
ChIP MCF-7 ENCFF044DWL 93 bp overlap
ZFP64 1 dataset
ChIP HEK293 GSE76494.ZFP64.HEK293 204 bp overlap
ZNF23 1 dataset
ChIP K-562 ENCSR898IDK.ZNF23.K-562 217 bp overlap