Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

45 transcription factors

CDX4 2 datasets

Motif DE_36h DE_36h-CDX4_MA1473.2 9 bp overlap

Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap

CHD7 1 dataset

ChIP WA01 ENCSR000AVA.CHD7.WA01 171 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 181 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 295 bp overlap

ChIP DE DE-FOXA2-2 401 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 368 bp overlap

ChIP DE DE-GATA4-2 411 bp overlap

GATA6 2 datasets

ChIP DE DE-GATA6-1 250 bp overlap

ChIP DE DE-GATA6-2 365 bp overlap

GLIS3 1 dataset

ChIP H9_plus GSE109562.GLIS3.H9_plus 103 bp overlap

HAND2 1 dataset

Motif DE_60h DE_60h-HAND2_MA1638.2 6 bp overlap

HMBOX1 1 dataset

Motif DE_60h DE_60h-HMBOX1_MA0895.2 7 bp overlap

HOXB13 2 datasets

Motif DE_36h DE_36h-HOXB13_MA0901.3 9 bp overlap

Motif DE_60h DE_60h-HOXB13_MA0901.3 9 bp overlap

Hoxa13 2 datasets

Motif DE_36h DE_36h-Hoxa13_MA0650.4 8 bp overlap

Motif DE_60h DE_60h-Hoxa13_MA0650.4 8 bp overlap

MEIS1 2 datasets

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MITF 3 datasets

ChIP 501-mel GSE137522.MITF.501-mel 210 bp overlap

ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 225 bp overlap

ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 217 bp overlap

NANOG 5 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 585 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 712 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 289 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 242 bp overlap

ChIP hESC GSE18292.NANOG.hESC 98 bp overlap

NR2F2 2 datasets

ChIP MCF-7 ENCFF329FZB 172 bp overlap

ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 301 bp overlap

POU2F1 2 datasets

Motif DE_36h DE_36h-POU2F1_MA0785.2 9 bp overlap

Motif DE_60h DE_60h-POU2F1_MA0785.2 9 bp overlap

POU3F1 2 datasets

Motif DE_36h DE_36h-POU3F1_MA0786.2 10 bp overlap

Motif DE_60h DE_60h-POU3F1_MA0786.2 10 bp overlap

POU3F2 2 datasets

Motif DE_36h DE_36h-POU3F2_MA0787.1 12 bp overlap

Motif DE_60h DE_60h-POU3F2_MA0787.1 12 bp overlap

POU3F3 2 datasets

Motif DE_36h DE_36h-POU3F3_MA0788.1 13 bp overlap

Motif DE_60h DE_60h-POU3F3_MA0788.1 13 bp overlap

POU3F4 2 datasets

Motif DE_36h DE_36h-POU3F4_MA0789.1 9 bp overlap

Motif DE_60h DE_60h-POU3F4_MA0789.1 9 bp overlap

POU5F1 2 datasets

ChIP HUES-8 GSE109524.POU5F1.HUES-8 574 bp overlap

ChIP hESC ENCSR264RJX.POU5F1.hESC 115 bp overlap

POU5F1B 2 datasets

Motif DE_36h DE_36h-POU5F1B_MA0792.1 9 bp overlap

Motif DE_60h DE_60h-POU5F1B_MA0792.1 9 bp overlap

Pou5f1::Sox2 1 dataset

Motif DE_60h DE_60h-Pou5f1Sox2_MA0142.1 15 bp overlap

RAD51 1 dataset

ChIP GM12878 ENCSR482TWQ.RAD51.GM12878 218 bp overlap

SMAD2 2 datasets

ChIP endoderm GSE29422.SMAD2.endoderm 139 bp overlap

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 356 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 427 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 565 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 354 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 302 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 502 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 214 bp overlap

SOX15 2 datasets

Motif DE_36h DE_36h-SOX15_MA1152.2 7 bp overlap

Motif DE_60h DE_60h-SOX15_MA1152.2 7 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 398 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 241 bp overlap

SOX2 1 dataset

ChIP hiPSC GSE56567.SOX2.hiPSC 195 bp overlap

SP8 1 dataset

Motif DE_60h DE_60h-SP8_MA0747.2 11 bp overlap

Six3 1 dataset

Motif DE_60h DE_60h-Six3_MA0631.2 11 bp overlap

Sox6 2 datasets

Motif DE_36h DE_36h-Sox6_MA0515.1 10 bp overlap

Motif DE_60h DE_60h-Sox6_MA0515.1 10 bp overlap

TWIST1 1 dataset

Motif DE_60h DE_60h-TWIST1_MA1123.3 8 bp overlap

Thap11 1 dataset

Motif DE_60h DE_60h-Thap11_MA1573.2 14 bp overlap

USF1 2 datasets

ChIP H1 ENCFF090WVU 241 bp overlap

ChIP WA01 ENCSR000BIU.USF1.WA01 247 bp overlap

USF2 1 dataset

ChIP GM12878 GSE97661.USF2.GM12878 167 bp overlap

ZNF410 2 datasets

Motif DE_36h DE_36h-ZNF410_MA0752.2 16 bp overlap

Motif DE_60h DE_60h-ZNF410_MA0752.2 16 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 251 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 194 bp overlap

ZNF558 2 datasets

Motif DE_36h DE_36h-ZNF558_MA2335.1 29 bp overlap

Motif DE_60h DE_60h-ZNF558_MA2335.1 29 bp overlap

ZNF652 1 dataset

Motif DE_60h DE_60h-ZNF652_MA1657.2 9 bp overlap

ZNF667 2 datasets

Motif DE_36h DE_36h-ZNF667_MA1984.2 11 bp overlap

Motif DE_60h DE_60h-ZNF667_MA1984.2 11 bp overlap

Zfp335 1 dataset

Motif DE_60h DE_60h-Zfp335_MA2002.2 7 bp overlap

Genome Browser