Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

44 transcription factors

AR 2 datasets

ChIP LNCaP-95_NT GSE125552.AR.LNCaP-95_NT 60 bp overlap

ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 50 bp overlap

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 130 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 297 bp overlap

BRD4 10 datasets

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 247 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 484 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 572 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-pos 361 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 316 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 189 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-pos GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-pos 500 bp overlap

ChIP hESC GSE33281.BRD4.hESC 61 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 473 bp overlap

ChIP retina_AB1-FW23 GSE86981.BRD4.retina_AB1-FW23 402 bp overlap

CTCF 1 dataset

ChIP VCaP ENCFF858YQT 185 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 230 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 240 bp overlap

ERG 1 dataset

ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 99 bp overlap

EZH2 2 datasets

ChIP PC-9 ENCSR793USK.EZH2.PC-9 250 bp overlap

ChIP neural progenitor cell ENCFF018MKA 224 bp overlap

EZH2_phosphoT487 1 dataset

ChIP neural_progenitor ENCSR656MXA.EZH2_phosphoT487.neural_progenitor 226 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 390 bp overlap

ChIP DE DE-FOXA2-2 264 bp overlap

FOXP2 1 dataset

ChIP PFSK1 ENCSR000BGA.FOXP2.PFSK1 135 bp overlap

GATA6 4 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 299 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 336 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 355 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 402 bp overlap

JUN 2 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 367 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 389 bp overlap

KLF15 1 dataset

ChIP HEK293 GSE76494.KLF15.HEK293 160 bp overlap

MAX 2 datasets

ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 385 bp overlap

ChIP NCI-H2171 GSE36354.MAX.NCI-H2171 348 bp overlap

MYC 1 dataset

ChIP NCI-H2171 GSE36354.MYC.NCI-H2171 333 bp overlap

MYCN 1 dataset

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 83 bp overlap

Nrf1 1 dataset

Motif DE_36h DE_36h-Nrf1_MA0506.3 12 bp overlap

POU5F1 1 dataset

ChIP DE_D1 DED1-OCT4_Batch_II 338 bp overlap

RARA 1 dataset

ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 229 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 623 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 634 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 366 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 432 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 400 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 320 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 294 bp overlap

SMARCA4 2 datasets

ChIP NSC GSE125033.SMARCA4.NSC 407 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 238 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 199 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 432 bp overlap

SOX2 2 datasets

ChIP RENVM GSE49404.SOX2.RENVM 209 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 277 bp overlap

SP3 1 dataset

ChIP HEK293 ENCSR141PZA.SP3.HEK293 356 bp overlap

SP4 1 dataset

ChIP HEK293 GSE76494.SP4.HEK293 302 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 244 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 287 bp overlap

TRIM28 1 dataset

ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 235 bp overlap

YY1 3 datasets

ChIP NT2-D1 ENCSR000EXG.YY1.NT2-D1 198 bp overlap

ChIP NT2/D1 ENCFF999MII 325 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 168 bp overlap

ZBTB33 1 dataset

ChIP MCF-7 ENCSR231YFE.ZBTB33.MCF-7 205 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 295 bp overlap

ZFP42 1 dataset

Motif DE_36h DE_36h-ZFP42_MA1651.2 13 bp overlap

ZFP57 1 dataset

ChIP hESC GSE115387.ZFP57.hESC 634 bp overlap

ZFX 1 dataset

ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 150 bp overlap

ZNF121 1 dataset

ChIP WTC11 ENCFF291API 297 bp overlap

ZNF140 1 dataset

Motif DE_36h DE_36h-ZNF140_MA1589.2 19 bp overlap

ZNF24 6 datasets

ChIP K-562 ENCSR695EQB.ZNF24.K-562 383 bp overlap

ChIP K-562 ENCSR117WTM.ZNF24.K-562 352 bp overlap

ChIP K-562 ENCSR099NCH.ZNF24.K-562 344 bp overlap

ChIP K-562 ENCSR385AHH.ZNF24.K-562 285 bp overlap

ChIP K562 ENCFF497GLV 349 bp overlap

ChIP K562 ENCFF615YYW 425 bp overlap

ZNF263 3 datasets

ChIP HEK293 ENCFF336CWQ 529 bp overlap

ChIP K-562 ENCSR000EWN.ZNF263.K-562 288 bp overlap

ChIP WTC11 ENCFF893RTM 437 bp overlap

ZNF467 1 dataset

ChIP HEK293 GSE76494.ZNF467.HEK293 185 bp overlap

ZNF57 1 dataset

ChIP BG01V GSE97403.ZNF57.BG01V 238 bp overlap

Zbtb2 1 dataset

Motif DE_36h DE_36h-Zbtb2_MA2340.1 10 bp overlap

Gene	Dist. to TSS	Distance	Link type
SDK2	110.4 kb	Distal	Multiome
CDC42EP4	222.0 kb	Distal	Multiome
RPL38	669.6 kb	Distal	Multiome+HiCAR

Genome Browser