chr1 : 242,525,617 242,525,764
147 bp 33 TFs 1 linked gene
This 147 bp open chromatin element is linked to PLD5 and is bound by 33 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PLD5 946 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:242,520,617 – 242,530,764
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
33 transcription factors
Source
Cell type
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 101 bp overlap
BRD1 1 dataset
ChIP HUES-64 GSE104059.BRD1.HUES-64 112 bp overlap
CEBPB 1 dataset
ChIP K562 ENCFF584CTB 80 bp overlap
Cebpa 3 datasets
ChIP BLaER1 ENCFF093OYK 147 bp overlap
ChIP BLaER1 ENCFF680YXW 113 bp overlap
ChIP BLaER1 ENCFF844FIP 67 bp overlap
EP300 3 datasets
ChIP SK-N-SH ENCFF829RWA 98 bp overlap
ChIP SK-N-SH ENCSR000EHV.EP300.SK-N-SH 57 bp overlap
ChIP osteoblast ENCSR000AUD.EP300.osteoblast 88 bp overlap
EZH2 20 datasets
ChIP GM23248 ENCFF404ZHM 99 bp overlap
ChIP GM23248 ENCSR131FFJ.EZH2.GM23248 147 bp overlap
ChIP GM23338 ENCSR045YHA.EZH2.GM23338 76 bp overlap
ChIP H1 ENCFF232NZA 147 bp overlap
ChIP Hep-G2 ENCSR000ARI.EZH2.Hep-G2 79 bp overlap
ChIP SF8628 GSE94834.EZH2.SF8628 147 bp overlap
ChIP T-REx-293_K27WT_12h GSE118954.EZH2.T-REx-293_K27WT_12h 82 bp overlap
ChIP T-REx-293_K27WT_6h GSE118954.EZH2.T-REx-293_K27WT_6h 67 bp overlap
ChIP THP-1 GSE135024.EZH2.THP-1 108 bp overlap
ChIP WA01 ENCSR000ASY.EZH2.WA01 147 bp overlap
ChIP astrocyte ENCSR000ARR.EZH2.astrocyte 147 bp overlap
ChIP endothelial cell of umbilical vein ENCFF539AKL 147 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ATA.EZH2.endothelial_umbilical-vein 147 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 113 bp overlap
ChIP fibroblast of dermis ENCFF029VZK 147 bp overlap
ChIP fibroblast of lung ENCFF479BAW 64 bp overlap
ChIP fibroblast_DERMAL ENCSR000ASE.EZH2.fibroblast_DERMAL 147 bp overlap
ChIP hepatocyte ENCFF118DKH 145 bp overlap
ChIP hepatocyte ENCFF552DZB 147 bp overlap
ChIP hepatocyte ENCSR384LYW.EZH2.hepatocyte 147 bp overlap
EZH2_phosphoT487 3 datasets
ChIP PC-3 ENCSR617RSQ.EZH2_phosphoT487.PC-3 147 bp overlap
ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 147 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR886KKK.EZH2_phosphoT487.neuron_bipolar_doxy_4d 147 bp overlap
GATA2 4 datasets
ChIP SH-SY5Y ENCFF485YIB 100 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 147 bp overlap
ChIP SK-N-SH ENCFF764OZD 102 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 85 bp overlap
GATA3 4 datasets
ChIP SH-SY5Y ENCFF475HYF 147 bp overlap
ChIP SH-SY5Y ENCFF475HYF 147 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 147 bp overlap
ChIP SK-N-SH ENCFF040SSB 123 bp overlap
HDAC1 1 dataset
ChIP PC-3_GDC-resist GSE147455.HDAC1.PC-3_GDC-resist 147 bp overlap
JARID2 1 dataset
ChIP MRC-5_IPS25_MEG3 GSE48515.JARID2.MRC-5_IPS25_MEG3 82 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 118 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 67 bp overlap
ChIP NB-1643 GSE138295.MYCN.NB-1643 81 bp overlap
MZF1 1 dataset
Motif DE_12h DE_12h-MZF1_MA0056.3 8 bp overlap
NFIA 1 dataset
Motif DE_12h DE_12h-NFIA_MA0670.2 6 bp overlap
NFIC 1 dataset
Motif DE_12h DE_12h-NFIC_MA0161.3 7 bp overlap
NFIX 1 dataset
Motif DE_12h DE_12h-NFIX_MA0671.2 6 bp overlap
Nr2e3 1 dataset
Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap
PITX3 1 dataset
ChIP SH-SY5Y GSE93275.PITX3.SH-SY5Y 147 bp overlap
RBPJ 1 dataset
Motif DE_12h DE_12h-RBPJ_MA1116.2 6 bp overlap
RCOR1 2 datasets
ChIP SK-N-SH ENCFF518EXB 115 bp overlap
ChIP SK-N-SH ENCSR009TKN.RCOR1.SK-N-SH 110 bp overlap
RNF2 3 datasets
ChIP H1 ENCFF239FFS 90 bp overlap
ChIP WA09_heat-shock GSE105028.RNF2.WA09_heat-shock 122 bp overlap
ChIP fibroblast GSE139053.RNF2.fibroblast 147 bp overlap
Rfx6 1 dataset
Motif DE_12h DE_12h-Rfx6_MA1724.2 9 bp overlap
SIX1 1 dataset
Motif DE_12h DE_12h-SIX1_MA1118.2 9 bp overlap
SMAD2 1 dataset
Motif DE_12h DE_12h-SMAD2_MA1964.2 6 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 117 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 147 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 147 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 63 bp overlap
TOX2 1 dataset
ChIP SK-N-SH ENCFF415OYE 93 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 147 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 147 bp overlap
Thap11 1 dataset
Motif DE_12h DE_12h-Thap11_MA1573.2 14 bp overlap
ZNF574 1 dataset
Motif DE_12h DE_12h-ZNF574_MA1982.2 14 bp overlap