chr16:29,709,743–29,710,091

chr16 : 29,709,743 – 29,710,091

348 bp 21 TFs 17 linked genes

This 348 bp open chromatin element is linked to 17 target genes and is bound by 21 transcription factors.

Linked Genes

17 genes

Gene	Expression	Dist. to TSS	Distance	Link type
ENSG00000289181		588 bp	At TSS	Proximity
ENSG00000260719		35.2 kb	Distal	Multiome
QPRT		46.7 kb	Distal	Multiome
KIF22		80.7 kb	Distal	Multiome
MAZ		96.1 kb	Distal	Multiome
MVP-DT		102.0 kb	Distal	Multiome
PRRT2		102.2 kb	Distal	Multiome
PAGR1		106.1 kb	Distal	Multiome
MVP		124.2 kb	Distal	Multiome
CDIPT		153.2 kb	Distal	Multiome
SEZ6L2		189.5 kb	Distal	Multiome
ASPHD1		190.3 kb	Distal	Multiome
KCTD13		216.2 kb	Distal	Multiome
TMEM219		252.1 kb	Distal	Multiome
TAOK2		263.8 kb	Distal	Multiome
INO80E		285.7 kb	Distal	Multiome
HIRIP3		286.1 kb	Distal	Multiome

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

21 transcription factors

ChIP WTC11 ENCFF556XTF 166 bp overlap

ChIP WTC11 ENCFF267GQJ 236 bp overlap

ARID4B 1 dataset

ChIP WTC11 ENCFF441HDK 91 bp overlap

ATF2 2 datasets

ChIP H1 ENCFF295GZO 86 bp overlap

ChIP H1 ENCFF295GZO 348 bp overlap

CHD1 5 datasets

ChIP H1 ENCFF998XEK 58 bp overlap

ChIP H1 ENCFF998XEK 122 bp overlap

ChIP H1 ENCFF998XEK 91 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 77 bp overlap

ChIP WA01 ENCSR000AQK.CHD1.WA01 134 bp overlap

CREM 2 datasets

ChIP WTC11 ENCFF209ZUE 129 bp overlap

ChIP WTC11 ENCFF209ZUE 338 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 224 bp overlap

GATA2 1 dataset

ChIP endothelial cell of umbilical vein ENCFF148NLK 244 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 258 bp overlap

ChIP DE DE-GATA4-2 274 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 177 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 251 bp overlap

ChIP DE DE-GATA6-2 314 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 321 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 348 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 348 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 330 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 224 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 348 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 127 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 116 bp overlap

GTF2F1 1 dataset

ChIP H1 ENCFF399TGL 233 bp overlap

ChIP DE_D1 S08-DE-d1-JUN-exp1 251 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 247 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 348 bp overlap

KAT7 2 datasets

ChIP WTC11 ENCFF581TPB 180 bp overlap

ChIP WTC11 ENCFF581TPB 289 bp overlap

ChIP K562 ENCFF167YID 265 bp overlap

ChIP H1 ENCFF427UFV 177 bp overlap

POLR2A 2 datasets

ChIP GM23338 ENCFF450WCS 199 bp overlap

ChIP H1 ENCFF566JSR 348 bp overlap

ChIP H1 ENCFF036PEF 168 bp overlap

ChIP WA01 ENCSR000BIV.SRF.WA01 188 bp overlap

TAF1 2 datasets

ChIP H1 ENCFF478SZO 60 bp overlap

ChIP H1 ENCFF478SZO 186 bp overlap

ChIP H1 ENCFF859IIO 167 bp overlap

ChIP WA01 ENCSR000ECB.TBP.WA01 279 bp overlap

ChIP hESC GSE122298.TBP.hESC 249 bp overlap

ChIP hESC_2h GSE122298.TBP.hESC_2h 203 bp overlap

ChIP H1 ENCFF524BTL 217 bp overlap

ChIP WA01 ENCSR000BKD.YY1.WA01 110 bp overlap

ZBTB43 1 dataset

ChIP WTC11 ENCFF058JUB 348 bp overlap