chr15 : 87,867,005 – 87,867,500

495 bp 62 TFs 0 linked genes

This 495 bp open chromatin element has no linked target genes and is bound by 62 transcription factors.

Linked Genes

No linked genes

Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

62 transcription factors

ARNT::HIF1A 1 dataset

Motif DE_12h DE_12h-ARNTHIF1A_MA0259.2 5 bp overlap

Arid3a 1 dataset

Motif DE_12h DE_12h-Arid3a_MA0151.1 6 bp overlap

BCOR 1 dataset

ChIP WA01_RNF2-R GSE104690.BCOR.WA01_RNF2-R 163 bp overlap

BRF1 1 dataset

ChIP H9_Activin GSE94418.BRF1.H9_Activin 123 bp overlap

CEBPA 2 datasets

Motif DE_12h DE_12h-CEBPA_MA0102.5 10 bp overlap

Motif DE_24h DE_24h-CEBPA_MA0102.5 10 bp overlap

CEBPD 2 datasets

Motif DE_12h DE_12h-CEBPD_MA0836.3 8 bp overlap

Motif DE_24h DE_24h-CEBPD_MA0836.3 8 bp overlap

CREB1 2 datasets

Motif DE_12h DE_12h-CREB1_MA0018.5 8 bp overlap

Motif DE_24h DE_24h-CREB1_MA0018.5 8 bp overlap

CTCF 2 datasets

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 176 bp overlap

ChIP endodermal cell ENCFF471YCZ 355 bp overlap

CTCFL 2 datasets

Motif DE_12h DE_12h-CTCFL_MA1102.3 8 bp overlap

Motif DE_24h DE_24h-CTCFL_MA1102.3 8 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF335XTP 251 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 244 bp overlap

ESR1 1 dataset

ChIP MCF-7_LTED GSE86538.ESR1.MCF-7_LTED 179 bp overlap

ETV2 1 dataset

Motif DE_12h DE_12h-ETV2_MA0762.2 9 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 299 bp overlap

ChIP DE DE-FOXA2-2 306 bp overlap

FOXN3 1 dataset

Motif DE_12h DE_12h-FOXN3_MA1489.1 8 bp overlap

FOXP2 1 dataset

Motif DE_12h DE_12h-FOXP2_MA0593.2 9 bp overlap

GATA6 6 datasets

ChIP DE_D1 S09-DE-d1-GATA6-exp1 402 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 430 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 311 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 331 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 441 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 438 bp overlap

GRHL1 1 dataset

Motif DE_12h DE_12h-GRHL1_MA0647.2 10 bp overlap

HIF1A 1 dataset

ChIP U2OS_trough_DMOG GSE85096.HIF1A.U2OS_trough_DMOG 367 bp overlap

HOXB4 2 datasets

Motif DE_12h DE_12h-HOXB4_MA1499.2 6 bp overlap

Motif DE_24h DE_24h-HOXB4_MA1499.2 6 bp overlap

HOXC4 2 datasets

Motif DE_12h DE_12h-HOXC4_MA1504.2 6 bp overlap

Motif DE_24h DE_24h-HOXC4_MA1504.2 6 bp overlap

HOXD3 2 datasets

Motif DE_12h DE_12h-HOXD3_MA0912.2 8 bp overlap

Motif DE_24h DE_24h-HOXD3_MA0912.2 8 bp overlap

HOXD4 2 datasets

Motif DE_12h DE_12h-HOXD4_MA1507.2 6 bp overlap

Motif DE_24h DE_24h-HOXD4_MA1507.2 6 bp overlap

Hand1::Tcf3 1 dataset

Motif DE_12h DE_12h-Hand1Tcf3_MA0092.2 9 bp overlap

INSM1 2 datasets

Motif DE_12h DE_12h-INSM1_MA0155.1 12 bp overlap

Motif DE_24h DE_24h-INSM1_MA0155.1 12 bp overlap

IRF3 1 dataset

Motif DE_12h DE_12h-IRF3_MA1418.2 17 bp overlap

MYB 2 datasets

Motif DE_12h DE_12h-MYB_MA0100.4 6 bp overlap

Motif DE_24h DE_24h-MYB_MA0100.4 6 bp overlap

NANOG 3 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 495 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 345 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 328 bp overlap

NEUROD1 1 dataset

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 181 bp overlap

NFATC3 2 datasets

Motif DE_12h DE_12h-NFATC3_MA0625.3 6 bp overlap

Motif DE_24h DE_24h-NFATC3_MA0625.3 6 bp overlap

NFIB 1 dataset

Motif DE_12h DE_12h-NFIB_MA1643.2 17 bp overlap

NR3C1 1 dataset

ChIP HeLa-B2_GRKD_DMSO GSE24518.NR3C1.HeLa-B2_GRKD_DMSO 66 bp overlap

Nfatc1 2 datasets

Motif DE_12h DE_12h-Nfatc1_MA0624.3 6 bp overlap

Motif DE_24h DE_24h-Nfatc1_MA0624.3 6 bp overlap

Nr2e1 2 datasets

Motif DE_12h DE_12h-Nr2e1_MA0676.1 9 bp overlap

Motif DE_24h DE_24h-Nr2e1_MA0676.1 9 bp overlap

Nr2e3 1 dataset

Motif DE_12h DE_12h-Nr2e3_MA0164.2 6 bp overlap

POU6F1 2 datasets

Motif DE_12h DE_12h-POU6F1_MA1549.2 7 bp overlap

Motif DE_24h DE_24h-POU6F1_MA1549.2 7 bp overlap

POU6F2 2 datasets

Motif DE_12h DE_12h-POU6F2_MA0793.2 9 bp overlap

Motif DE_24h DE_24h-POU6F2_MA0793.2 9 bp overlap

PRDM1 1 dataset

Motif DE_12h DE_12h-PRDM1_MA0508.4 7 bp overlap

RARA::RXRA 1 dataset

Motif DE_12h DE_12h-RARARXRA_MA0159.1 17 bp overlap

RELB 1 dataset

ChIP L1236 GSE63736.RELB.L1236 88 bp overlap

REST 2 datasets

ChIP H1 ENCFF429RUE 201 bp overlap

ChIP WA01 ENCSR000BHM.REST.WA01 197 bp overlap

RREB1 1 dataset

Motif DE_12h DE_12h-RREB1_MA0073.2 19 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 299 bp overlap

SMARCA4 1 dataset

ChIP hiPSC GSE124903.SMARCA4.hiPSC 256 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 199 bp overlap

SMARCC1 1 dataset

ChIP hiPSC GSE124903.SMARCC1.hiPSC 207 bp overlap

SNAI2 1 dataset

ChIP SMS-CTR_T48 GSE137168.SNAI2.SMS-CTR_T48 244 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 320 bp overlap

STAT1::STAT2 1 dataset

Motif DE_12h DE_12h-STAT1STAT2_MA0517.2 13 bp overlap

Spi1 1 dataset

Motif DE_12h DE_12h-Spi1_MA0080.7 13 bp overlap

Stat4 1 dataset

Motif DE_12h DE_12h-Stat4_MA0518.2 10 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TCF7L2 2 datasets

Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap

Motif DE_24h DE_24h-TCF7L2_MA0523.2 9 bp overlap

ZIM3 1 dataset

Motif DE_12h DE_12h-ZIM3_MA1709.2 11 bp overlap

ZKSCAN5 1 dataset

Motif DE_12h DE_12h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF281 2 datasets

Motif DE_12h DE_12h-ZNF281_MA1630.3 10 bp overlap

Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap

ZNF282 1 dataset

Motif DE_12h DE_12h-ZNF282_MA1154.2 15 bp overlap

ZNF320 2 datasets

Motif DE_12h DE_12h-ZNF320_MA1976.2 20 bp overlap

Motif DE_24h DE_24h-ZNF320_MA1976.2 20 bp overlap

ZNF547 2 datasets

Motif DE_12h DE_12h-ZNF547_MA2334.1 13 bp overlap

Motif DE_24h DE_24h-ZNF547_MA2334.1 13 bp overlap

ZNF675 2 datasets

Motif DE_12h DE_12h-ZNF675_MA1714.2 19 bp overlap

Motif DE_24h DE_24h-ZNF675_MA1714.2 19 bp overlap

ZNF768 1 dataset

Motif DE_12h DE_12h-ZNF768_MA1731.2 9 bp overlap

Zfp809 1 dataset

Motif DE_12h DE_12h-Zfp809_MA2125.1 9 bp overlap