chr15 : 78,331,404 78,331,679
275 bp 42 TFs 1 linked gene
This 275 bp open chromatin element is linked to CRABP1 and is bound by 42 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
CRABP1 8.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:78,326,404 – 78,336,679
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 171 bp overlap
ASH2L 1 dataset
ChIP WA01 ENCSR850KIP.ASH2L.WA01 120 bp overlap
BCL6 1 dataset
ChIP OCI-Ly1 GSE29282.BCL6.OCI-Ly1 96 bp overlap
BRD4 4 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 209 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 233 bp overlap
ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 275 bp overlap
ChIP retina_AB1-RB GSE86981.BRD4.retina_AB1-RB 172 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231 GSE112444.CDKN1B.MDA-MB-231 218 bp overlap
CHD7 2 datasets
ChIP hiPSC_AF22_abD3F5 GSE108506.CHD7.hiPSC_AF22_abD3F5 275 bp overlap
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 275 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 235 bp overlap
E2F1 1 dataset
ChIP LNCaP_shRB GSE94958.E2F1.LNCaP_shRB 133 bp overlap
ERG 2 datasets
ChIP AMLPZ12 GSE23730.ERG.AMLPZ12 147 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 118 bp overlap
ESR1 5 datasets
ChIP Ishikawa_siNTC-72h GSE129803.ESR1.Ishikawa_siNTC-72h 56 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 177 bp overlap
ChIP MCF-7 GSE48930.ESR1.MCF-7 150 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 103 bp overlap
ChIP MCF-7_estradiol-aldosterone_45min GSE99626.ESR1.MCF-7_estradiol-aldosterone_45min 214 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 275 bp overlap
GLIS3 1 dataset
ChIP H9_plus GSE109562.GLIS3.H9_plus 275 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 275 bp overlap
JUN 4 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 232 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 153 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 274 bp overlap
ChIP MDA-BoM-1833_shp27 GSE112444.JUN.MDA-BoM-1833_shp27 125 bp overlap
MAFK 1 dataset
ChIP Hep-G2 ENCSR000EDZ.MAFK.Hep-G2 115 bp overlap
NFKB1 2 datasets
ChIP HEK293T GSE129618.NFKB1.HEK293T 199 bp overlap
ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 193 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 217 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 275 bp overlap
POU5F1 4 datasets
ChIP BG03 GSE21614.POU5F1.BG03 163 bp overlap
ChIP DE_D1 DED1-OCT4_Batch_II 258 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 275 bp overlap
ChIP WA01_3IL ERP004238.POU5F1.WA01_3IL 126 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 230 bp overlap
RELA 1 dataset
ChIP HEK293_TNF-1h GSE75562.RELA.HEK293_TNF-1h 143 bp overlap
SMAD2 3 datasets
ChIP hESC GSE29422.SMAD2.hESC 146 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 275 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 271 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 275 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 275 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 275 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 275 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 275 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 275 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 275 bp overlap
SMAD3 3 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 274 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 161 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 127 bp overlap
SMARCA4 2 datasets
ChIP NSC GSE125033.SMARCA4.NSC 268 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 54 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 266 bp overlap
SOX2 5 datasets
ChIP HNSC GSE69479.SOX2.HNSC 275 bp overlap
ChIP hiPSC GSE67282.SOX2.hiPSC 275 bp overlap
ChIP hiPSC_INHI GSE67282.SOX2.hiPSC_INHI 76 bp overlap
ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 187 bp overlap
ChIP hiPSC_KDP53_INHI GSE67282.SOX2.hiPSC_KDP53_INHI 275 bp overlap
SOX21 1 dataset
ChIP neuroepithelilal-cells GSE110505.SOX21.neuroepithelilal-cells 267 bp overlap
SUZ12 1 dataset
ChIP LNCaP GSE39459.SUZ12.LNCaP 275 bp overlap
TBL1X 1 dataset
ChIP HEK293T GSE35197.TBL1X.HEK293T 217 bp overlap
TEAD4 1 dataset
ChIP H1 ENCFF778PAX 129 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 211 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 275 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_2d_TFAP2C_Induc 218 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 125 bp overlap
ZFX 1 dataset
ChIP HEK293T_FLAG GSE145160.ZFX.HEK293T_FLAG 275 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 96 bp overlap
ZNF425 1 dataset
ChIP HEK293T GSE78099.ZNF425.HEK293T 141 bp overlap
ZNF711 1 dataset
ChIP HEK293T GSE145160.ZNF711.HEK293T 236 bp overlap