chr15 : 67,071,011 67,071,208
197 bp 30 TFs 2 linked genes
This 197 bp open chromatin element is linked to SMAD3-DT and SMAD3 and is bound by 30 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SMAD3-DT 5.7 kb Proximal Proximity
SMAD3 7.2 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:67,066,011 – 67,076,208
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
30 transcription factors
Source
Cell type
ARID1A 3 datasets
ChIP 12Z GSE129781.ARID1A.12Z 171 bp overlap
ChIP endometrial-epithelial-cells GSE106660.ARID1A.endometrial-epithelial-cells 197 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.ARID1A.endometrial-epithelial-cells_KO 197 bp overlap
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 173 bp overlap
BRD2 2 datasets
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 114 bp overlap
ChIP SK-MEL-147_JQ1 GSE94488.BRD2.SK-MEL-147_JQ1 166 bp overlap
BRD4 2 datasets
ChIP MDA-MB-231_DMSO GSE116879.BRD4.MDA-MB-231_DMSO 164 bp overlap
ChIP MDA-MB-231_DMSO_rDNA GSE116879.BRD4.MDA-MB-231_DMSO_rDNA 164 bp overlap
EP300 1 dataset
ChIP Ishikawa ENCSR000BUE.EP300.Ishikawa 167 bp overlap
EZH2 1 dataset
ChIP DND41 ENCSR000ASW.EZH2.DND41 197 bp overlap
FOXL2 1 dataset
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 197 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 127 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 70 bp overlap
ChIP DE DE-GATA6-2 179 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 106 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 197 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 103 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 166 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 197 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 197 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 197 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 169 bp overlap
NKX2-5 1 dataset
ChIP hESC_ab3584 GSE89457.NKX2-5.hESC_ab3584 197 bp overlap
NR3C1 3 datasets
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 196 bp overlap
ChIP BEAS-2B_Veh_IA1 GSE125623.NR3C1.BEAS-2B_Veh_IA1 197 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 197 bp overlap
PHIP 1 dataset
ChIP HCT-116_MLL1-KO__ab833 GSE101646.PHIP.HCT-116_MLL1-KO__ab833 103 bp overlap
SIN3A 1 dataset
ChIP PANC-1 ENCSR000BOW.SIN3A.PANC-1 184 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 197 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 197 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 197 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 197 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 197 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 197 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 197 bp overlap
SMAD3 1 dataset
ChIP NCI-H441 GSE51509.SMAD3.NCI-H441 130 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 191 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 197 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 197 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 157 bp overlap
SMC1 1 dataset
ChIP DKO GSE131606.SMC1.DKO 145 bp overlap
SS18 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 185 bp overlap
STAT3 1 dataset
ChIP A139 GSE85579.STAT3.A139 197 bp overlap
TEAD1 2 datasets
ChIP HUCCT1 GSE68296.TEAD1.HUCCT1 160 bp overlap
ChIP keratinocyte GSE138727.TEAD1.keratinocyte 197 bp overlap
TEAD4 5 datasets
ChIP HCT-116 ENCSR000BVJ.TEAD4.HCT-116 108 bp overlap
ChIP Ishikawa ENCFF772OTG 197 bp overlap
ChIP Ishikawa ENCSR000BSW.TEAD4.Ishikawa 164 bp overlap
ChIP SK-MEL-147 GSE94488.TEAD4.SK-MEL-147 197 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 155 bp overlap
TFAP2C 1 dataset
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 197 bp overlap
YY1AP1 1 dataset
ChIP MCF-10A_DOX GSE115787.YY1AP1.MCF-10A_DOX 144 bp overlap
ZNF12 2 datasets
ChIP Hep-G2 ENCSR711KBM.ZNF12.Hep-G2 197 bp overlap
ChIP HepG2 ENCFF347LSW 197 bp overlap
ZNF24 8 datasets
ChIP GM12878 ENCFF688STO 98 bp overlap
ChIP K-562 ENCSR099NCH.ZNF24.K-562 197 bp overlap
ChIP K-562 ENCSR695EQB.ZNF24.K-562 174 bp overlap
ChIP K-562 ENCSR117WTM.ZNF24.K-562 99 bp overlap
ChIP K-562 ENCSR385AHH.ZNF24.K-562 105 bp overlap
ChIP K562 ENCFF497GLV 197 bp overlap
ChIP K562 ENCFF615YYW 100 bp overlap
ChIP K562 ENCFF615YYW 164 bp overlap