Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

41 transcription factors

AR 1 dataset

ChIP MDA-MB-453 ERP003503.AR.MDA-MB-453 149 bp overlap

BRD4 1 dataset

ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.BRD4.LNCaP-clone-FGC_DHT-ABBV-075 216 bp overlap

CBFA2T2 1 dataset

ChIP NCCIT GSE71675.CBFA2T2.NCCIT 299 bp overlap

CHD1 1 dataset

ChIP HeLa-S3 ENCSR392EAA.CHD1.HeLa-S3 121 bp overlap

CHD8 1 dataset

ChIP T-47D_ETOH_45 GSE62428.CHD8.T-47D_ETOH_45 155 bp overlap

CTBP1 1 dataset

ChIP K-562 ENCSR201NQZ.CTBP1.K-562 232 bp overlap

CTCF 1 dataset

ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 316 bp overlap

Cebpa 2 datasets

ChIP BLaER1 ENCFF031ISE 79 bp overlap

ChIP BLaER1 ENCFF798NMV 90 bp overlap

EGR2 1 dataset

ChIP HEK293 ENCFF336LFH 236 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 142 bp overlap

ESR1 2 datasets

ChIP Ishikawa_E2-1h GSE129803.ESR1.Ishikawa_E2-1h 204 bp overlap

ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 310 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 329 bp overlap

ChIP DE DE-FOXA2-2 348 bp overlap

GATA2 2 datasets

ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 146 bp overlap

ChIP K-562 ENCSR000DKA.GATA2.K-562 214 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 639 bp overlap

ChIP DE DE-GATA4-2 637 bp overlap

ChIP foregut GSE117136.GATA4.foregut 360 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 639 bp overlap

ChIP DE DE-GATA6-2 639 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 639 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 399 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 350 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 573 bp overlap

ChIP foregut GSE117136.GATA6.foregut 317 bp overlap

HNRNPLL 1 dataset

ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 215 bp overlap

MECOM 1 dataset

ChIP SKH1_CEBPA-ER GSE102697.MECOM.SKH1_CEBPA-ER 270 bp overlap

MITF 2 datasets

ChIP K-562 ENCSR797SWM.MITF.K-562 214 bp overlap

ChIP K562 ENCFF731XJJ 129 bp overlap

MLLT1 1 dataset

ChIP MCF-7 ENCSR427BBI.MLLT1.MCF-7 189 bp overlap

NELFE 1 dataset

ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 180 bp overlap

NFKB1 1 dataset

ChIP HEK293T_2KR GSE129618.NFKB1.HEK293T_2KR 328 bp overlap

POU5F1 1 dataset

ChIP BG03 GSE21614.POU5F1.BG03 239 bp overlap

PRDM1 1 dataset

ChIP fetal_testis GSE100639.PRDM1.fetal_testis 56 bp overlap

PRDM10 2 datasets

ChIP HEK293 ENCFF145WQQ 288 bp overlap

ChIP K-562 ENCSR120MPG.PRDM10.K-562 132 bp overlap

RNF2 1 dataset

ChIP K-562 ENCSR138FUZ.RNF2.K-562 165 bp overlap

SIRT6 1 dataset

ChIP SK-MEL-239_L-C-B GSE102813.SIRT6.SK-MEL-239_L-C-B 159 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 191 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 639 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 402 bp overlap

SMAD2_3 2 datasets

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 639 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 582 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 463 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 639 bp overlap

SPI1 3 datasets

ChIP K-562 GSE70482.SPI1.K-562 103 bp overlap

ChIP K-562 ENCSR000BGW.SPI1.K-562 59 bp overlap

ChIP OCI-Ly7 GSE69558.SPI1.OCI-Ly7 60 bp overlap

SUZ12 1 dataset

ChIP LNCaP GSE39459.SUZ12.LNCaP 212 bp overlap

TFE3 1 dataset

ChIP K562 ENCFF697ABG 175 bp overlap

USF1 3 datasets

ChIP K-562 ENCSR000BKT.USF1.K-562 104 bp overlap

ChIP K562 ENCFF202SFC 412 bp overlap

ChIP K562 ENCFF633EZB 132 bp overlap

USF2 3 datasets

ChIP K-562 ENCSR359NFW.USF2.K-562 170 bp overlap

ChIP K562 ENCFF306QPU 295 bp overlap

ChIP K562 ENCFF397QGU 111 bp overlap

ZBTB7A 1 dataset

ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 134 bp overlap

ZFHX2 1 dataset

ChIP HEK293 ENCFF167TUA 267 bp overlap

ZNF143 1 dataset

ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 264 bp overlap

ZNF479 1 dataset

ChIP HEK293T GSE78099.ZNF479.HEK293T 248 bp overlap

ZNF528 1 dataset

ChIP HEK293 GSE76494.ZNF528.HEK293 246 bp overlap

Gene	Dist. to TSS	Distance	Link type
PARP1	5.9 kb	Proximal	Proximity
LIN9	105.1 kb	Distal	Multiome
MIXL1	190.6 kb	Distal	Multiome
ACBD3	227.5 kb	Distal	Multiome

Genome Browser