Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

AR 1 dataset

ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 73 bp overlap

ARNT 2 datasets

ChIP MCF-7_Ctrl GSE85352.ARNT.MCF-7_Ctrl 269 bp overlap

ChIP T-47D GSE130989.ARNT.T-47D 222 bp overlap

BARHL1 1 dataset

Motif DE_36h DE_36h-BARHL1_MA0877.4 6 bp overlap

BARHL2 1 dataset

Motif DE_36h DE_36h-BARHL2_MA0635.2 6 bp overlap

BRD2 4 datasets

ChIP HCC1806_BAZ2B_JQ1 GSE116879.BRD2.HCC1806_BAZ2B_JQ1 161 bp overlap

ChIP HCC1806_BAZ2BsiRNA GSE116879.BRD2.HCC1806_BAZ2BsiRNA 401 bp overlap

ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 401 bp overlap

ChIP HCC1806_NTsiRNA_JQ1 GSE116879.BRD2.HCC1806_NTsiRNA_JQ1 308 bp overlap

BRD4 5 datasets

ChIP BE2C GSE80151.BRD4.BE2C 401 bp overlap

ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 105 bp overlap

ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 140 bp overlap

ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 239 bp overlap

ChIP SK-N-BE2-C GSE80151.BRD4.SK-N-BE2-C 401 bp overlap

CDK8 1 dataset

ChIP SET-2 GSE65138.CDK8.SET-2 171 bp overlap

CREB1 4 datasets

ChIP MCF-7 ENCFF341ZEM 364 bp overlap

ChIP MCF-7 ENCFF867SAS 367 bp overlap

ChIP MCF-7 ENCSR897JAS.CREB1.MCF-7 296 bp overlap

ChIP MCF-7 ENCSR620DUQ.CREB1.MCF-7 298 bp overlap

CREBBP 1 dataset

ChIP retina_Hu33 GSE137311.CREBBP.retina_Hu33 336 bp overlap

CRX 3 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 225 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 263 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 300 bp overlap

CTCF 4 datasets

ChIP GSC23 GSE139416.CTCF.GSC23 209 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 251 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 340 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 356 bp overlap

DMRTA2 1 dataset

Motif DE_36h DE_36h-DMRTA2_MA1478.2 6 bp overlap

FOXA1 30 datasets

ChIP 22Rv1_CST GSE129951.FOXA1.22Rv1_CST 387 bp overlap

ChIP 22Rv1_CST_Crispr GSE123618.FOXA1.22Rv1_CST_Crispr 221 bp overlap

ChIP 22Rv1_CST_Crispr-36 GSE123618.FOXA1.22Rv1_CST_Crispr-36 196 bp overlap

ChIP 22Rv1_CST_Crispr-70 GSE123618.FOXA1.22Rv1_CST_Crispr-70 222 bp overlap

ChIP 22Rv1_EtOH GSE80742.FOXA1.22Rv1_EtOH 199 bp overlap

ChIP 22Rv1_R1881 GSE80742.FOXA1.22Rv1_R1881 182 bp overlap

ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 209 bp overlap

ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 168 bp overlap

ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 208 bp overlap

ChIP MCF-7 GSE59530.FOXA1.MCF-7 237 bp overlap

ChIP MCF-7 ERP000380.FOXA1.MCF-7 268 bp overlap

ChIP MCF-7 GSE81714.FOXA1.MCF-7 264 bp overlap

ChIP MCF-7 ERP001226.FOXA1.MCF-7 137 bp overlap

ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 250 bp overlap

ChIP MCF-7_4OH-Tam GSE75201.FOXA1.MCF-7_4OH-Tam 112 bp overlap

ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 229 bp overlap

ChIP MCF-7_E2 GSE59530.FOXA1.MCF-7_E2 204 bp overlap

ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 207 bp overlap

ChIP MCF-7_E2_TNF GSE59530.FOXA1.MCF-7_E2_TNF 198 bp overlap

ChIP MCF-7_TNF GSE59530.FOXA1.MCF-7_TNF 279 bp overlap

ChIP MCF-7_vehicle_ab2 GSE112969.FOXA1.MCF-7_vehicle_ab2 292 bp overlap

ChIP T-47D_8h GSE137579.FOXA1.T-47D_8h 190 bp overlap

ChIP T-47D_CR3flp GSE99479.FOXA1.T-47D_CR3flp 273 bp overlap

ChIP T-47D_JC4743 GSE126004.FOXA1.T-47D_JC4743 359 bp overlap

ChIP T-47D_JC4747 GSE126004.FOXA1.T-47D_JC4747 227 bp overlap

ChIP T-47D_shRNF2 GSE137579.FOXA1.T-47D_shRNF2 197 bp overlap

ChIP T-47D_shRNF2_45min GSE137579.FOXA1.T-47D_shRNF2_45min 216 bp overlap

ChIP T-47D_shRNF2_8h GSE137579.FOXA1.T-47D_shRNF2_8h 161 bp overlap

ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 188 bp overlap

ChIP prostate_P7_T GSE130408.FOXA1.prostate_P7_T 286 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 401 bp overlap

ChIP DE DE-FOXA2-2 401 bp overlap

FOXB1 1 dataset

Motif DE_36h DE_36h-FOXB1_MA0845.1 11 bp overlap

FOXC1 1 dataset

Motif DE_36h DE_36h-FOXC1_MA0032.2 11 bp overlap

Foxl2 1 dataset

Motif DE_36h DE_36h-Foxl2_MA1607.2 10 bp overlap

GATA3_Nter 1 dataset

ChIP T-47D_CR3flp GSE99479.GATA3_Nter.T-47D_CR3flp 205 bp overlap

HAND2 1 dataset

ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 195 bp overlap

HIF1A 2 datasets

ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 197 bp overlap

ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 181 bp overlap

HOXB13 2 datasets

ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 135 bp overlap

ChIP prostate_P7_T GSE130408.HOXB13.prostate_P7_T 401 bp overlap

MAX 2 datasets

ChIP MCF-7 ENCFF169IXS 294 bp overlap

ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 128 bp overlap

MEF2D 1 dataset

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 258 bp overlap

MRTFB 1 dataset

ChIP A-673-clone-Asp114 GSE92738.MRTFB.A-673-clone-Asp114 53 bp overlap

MYCN 7 datasets

ChIP BE2C GSE80151.MYCN.BE2C 193 bp overlap

ChIP COG-N-415 GSE138295.MYCN.COG-N-415 361 bp overlap

ChIP LA-N-5 GSE138295.MYCN.LA-N-5 225 bp overlap

ChIP NB-1643 GSE138295.MYCN.NB-1643 401 bp overlap

ChIP NB-1643 GSE94782.MYCN.NB-1643 147 bp overlap

ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 331 bp overlap

ChIP SK-N-BE2-C GSE80151.MYCN.SK-N-BE2-C 193 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 370 bp overlap

PHOX2B 2 datasets

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 253 bp overlap

ChIP SK-N-BE2-C GSE94822.PHOX2B.SK-N-BE2-C 308 bp overlap

PKNOX1 1 dataset

ChIP MCF-7 ENCSR986XYK.PKNOX1.MCF-7 212 bp overlap

POU2F1 1 dataset

ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 128 bp overlap

POU5F1 1 dataset

Motif DE_36h DE_36h-POU5F1_MA1115.2 7 bp overlap

SMARCA4 1 dataset

ChIP NGP_ARID1A-het GSE134626.SMARCA4.NGP_ARID1A-het 302 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 401 bp overlap

TWIST1 2 datasets

ChIP BE2C GSE80151.TWIST1.BE2C 286 bp overlap

ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 286 bp overlap

YY1 2 datasets

ChIP Hep-G2_NC GSE120104.YY1.Hep-G2_NC 299 bp overlap

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 387 bp overlap

ZNF324 1 dataset

Motif DE_36h DE_36h-ZNF324_MA1977.2 14 bp overlap

Genome Browser