Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

40 transcription factors

ATF4 3 datasets

Motif DE_36h DE_36h-ATF4_MA0833.3 10 bp overlap

Motif DE_48h DE_48h-ATF4_MA0833.3 10 bp overlap

Motif DE_60h DE_60h-ATF4_MA0833.3 10 bp overlap

BRD4 7 datasets

ChIP K-562_DMSO GSE138084.BRD4.K-562_DMSO 268 bp overlap

ChIP K-562_DMSO-IFNG GSE138084.BRD4.K-562_DMSO-IFNG 213 bp overlap

ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 276 bp overlap

ChIP MOLM-14_IBET GSE65138.BRD4.MOLM-14_IBET 243 bp overlap

ChIP MV4-11-B_BI00894999_100nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_100nM_4h 288 bp overlap

ChIP MV4-11-B_BI00894999_35nM_4h GSE101821.BRD4.MV4-11-B_BI00894999_35nM_4h 149 bp overlap

ChIP MV4-11-B_DMSO GSE101821.BRD4.MV4-11-B_DMSO 218 bp overlap

CDK8 1 dataset

ChIP MOLM-14_IBET GSE65138.CDK8.MOLM-14_IBET 274 bp overlap

CDK9 1 dataset

ChIP MV4-11_DMSO GSE82116.CDK9.MV4-11_DMSO 146 bp overlap

CEBPA 1 dataset

ChIP Kasumi-1_CEBPA-ER_E2 GSE102697.CEBPA.Kasumi-1_CEBPA-ER_E2 162 bp overlap

CEBPG 3 datasets

Motif DE_36h DE_36h-CEBPG_MA1636.2 10 bp overlap

Motif DE_48h DE_48h-CEBPG_MA1636.2 10 bp overlap

Motif DE_60h DE_60h-CEBPG_MA1636.2 10 bp overlap

DUX4 3 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

Motif DE_60h DE_60h-DUX4_MA0468.1 11 bp overlap

DUXA 3 datasets

Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

Motif DE_60h DE_60h-DUXA_MA0884.2 13 bp overlap

Dux 3 datasets

Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap

Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap

Motif DE_60h DE_60h-Dux_MA0611.3 11 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 163 bp overlap

ERG 1 dataset

ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 190 bp overlap

GATA2 2 datasets

Motif DE_36h DE_36h-GATA2_MA0036.4 7 bp overlap

ChIP TF1 GSE73207.GATA2.TF1 288 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 288 bp overlap

ChIP DE DE-GATA4-2 288 bp overlap

Motif DE_36h DE_36h-GATA4_MA0482.3 8 bp overlap

GATA5 1 dataset

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

GATA6 10 datasets

ChIP DE DE-GATA6-1 288 bp overlap

ChIP DE DE-GATA6-2 288 bp overlap

Motif DE_36h DE_36h-GATA6_MA1104.3 8 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 288 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 260 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 288 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 288 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 288 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 242 bp overlap

GLIS3 3 datasets

Motif DE_36h DE_36h-GLIS3_MA0737.1 14 bp overlap

Motif DE_48h DE_48h-GLIS3_MA0737.1 14 bp overlap

Motif DE_60h DE_60h-GLIS3_MA0737.1 14 bp overlap

Gata3 1 dataset

Motif DE_36h DE_36h-Gata3_MA0037.5 8 bp overlap

JMJD1C 1 dataset

ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 236 bp overlap

JUN 3 datasets

Motif DE_36h DE_36h-JUN_MA0488.2 10 bp overlap

Motif DE_48h DE_48h-JUN_MA0488.2 10 bp overlap

Motif DE_60h DE_60h-JUN_MA0488.2 10 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Mecom 1 dataset

Motif DE_36h DE_36h-Mecom_MA0029.2 11 bp overlap

NFYA 3 datasets

Motif DE_36h DE_36h-NFYA_MA0060.4 8 bp overlap

Motif DE_48h DE_48h-NFYA_MA0060.4 8 bp overlap

Motif DE_60h DE_60h-NFYA_MA0060.4 8 bp overlap

NFYC 3 datasets

Motif DE_36h DE_36h-NFYC_MA1644.2 7 bp overlap

Motif DE_48h DE_48h-NFYC_MA1644.2 7 bp overlap

Motif DE_60h DE_60h-NFYC_MA1644.2 7 bp overlap

NKX2-3 1 dataset

Motif DE_36h DE_36h-NKX2-3_MA0672.2 8 bp overlap

PLAG1 3 datasets

Motif DE_36h DE_36h-PLAG1_MA0163.1 14 bp overlap

Motif DE_48h DE_48h-PLAG1_MA0163.1 14 bp overlap

Motif DE_60h DE_60h-PLAG1_MA0163.1 14 bp overlap

RARA 3 datasets

Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap

Motif DE_48h DE_48h-RARA_MA0729.1 18 bp overlap

Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap

RUNX1 1 dataset

ChIP SKH1_RUNX1-EVI1_KD GSE87283.RUNX1.SKH1_RUNX1-EVI1_KD 127 bp overlap

RUNX1T1 1 dataset

ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 285 bp overlap

SP5 3 datasets

Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

Motif DE_60h DE_60h-SP5_MA1965.2 6 bp overlap

SPI1 12 datasets

ChIP BDMC_donorG GSE128834.SPI1.BDMC_donorG 110 bp overlap

ChIP BDMC_donorH GSE128834.SPI1.BDMC_donorH 150 bp overlap

ChIP CTV-1_FLAG_15perc GSE128835.SPI1.CTV-1_FLAG_15perc 225 bp overlap

ChIP EM-3 GSE128834.SPI1.EM-3 229 bp overlap

ChIP HL-60 ENCFF645GBT 223 bp overlap

ChIP K-562 GSE70482.SPI1.K-562 228 bp overlap

ChIP KG-1 GSE128834.SPI1.KG-1 165 bp overlap

ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 205 bp overlap

ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 198 bp overlap

ChIP NB4 GSE128834.SPI1.NB4 233 bp overlap

ChIP THP-1 GSE128834.SPI1.THP-1 97 bp overlap

ChIP U-937 GSE128834.SPI1.U-937 225 bp overlap

STAT1_pS727 1 dataset

ChIP SET-2 GSE100566.STAT1_pS727.SET-2 176 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

TCF3 1 dataset

ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 267 bp overlap

THRA 1 dataset

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

TRIM24 2 datasets

ChIP MOLM-13_IACS-9571 GSE100571.TRIM24.MOLM-13_IACS-9571 108 bp overlap

ChIP MOLM-13_dTRIM24 GSE100571.TRIM24.MOLM-13_dTRIM24 150 bp overlap

TRPS1 1 dataset

Motif DE_36h DE_36h-TRPS1_MA1970.2 8 bp overlap

ZKSCAN5 3 datasets

Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_60h DE_60h-ZKSCAN5_MA1652.2 9 bp overlap

ZNF257 1 dataset

Motif DE_60h DE_60h-ZNF257_MA1710.2 10 bp overlap

ZNF35 1 dataset

Motif DE_36h DE_36h-ZNF35_MA2333.1 7 bp overlap

ZNF354C 1 dataset

Motif DE_36h DE_36h-ZNF354C_MA0130.1 6 bp overlap

Genome Browser