chr13 : 82,294,073 – 82,294,707
634 bp 47 TFs 0 linked genes
This 634 bp open chromatin element has no linked target genes and is bound by 47 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:82,289,073 – 82,299,707
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
47 transcription factors
Source
Cell type
BRD4 4 datasets
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 101 bp overlap
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 311 bp overlap
ChIP LNCaP-clone-FGC_DHT-Enzalutamide GSE118247.BRD4.LNCaP-clone-FGC_DHT-Enzalutamide 197 bp overlap
ChIP MCF-7_E2 GSE55921.BRD4.MCF-7_E2 239 bp overlap
CTCF 27 datasets
Motif DE_12h DE_12h-CTCF_MA0139.2 15 bp overlap
Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap
Motif DE_24h DE_24h-CTCF_MA1929.2 31 bp overlap
Motif DE_24h DE_24h-CTCF_MA1930.2 33 bp overlap
Motif ES_0h ES_0h-CTCF_MA0139.2 15 bp overlap
ChIP GM23338 ENCFF531QOI 425 bp overlap
ChIP GM23338 ENCFF772DML 95 bp overlap
ChIP GSC23 GSE139416.CTCF.GSC23 224 bp overlap
ChIP H1 ENCFF764RHO 277 bp overlap
ChIP H9 ENCFF152GTF 241 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 194 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 278 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 224 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HepG2 ENCFF127KUP 231 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 228 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 90 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 133 bp overlap
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 194 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 296 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 244 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 223 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 251 bp overlap
ChIP neural progenitor cell ENCFF420RBO 411 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 223 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 157 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF262VBH 173 bp overlap
ChIP BLaER1 ENCFF274GAT 203 bp overlap
FIGLA 3 datasets
Motif DE_12h DE_12h-FIGLA_MA0820.2 6 bp overlap
Motif DE_24h DE_24h-FIGLA_MA0820.2 6 bp overlap
Motif ES_0h ES_0h-FIGLA_MA0820.2 6 bp overlap
GATA6 5 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 346 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 308 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 338 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 292 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 328 bp overlap
GTF3C2 1 dataset
ChIP H9 GSE94418.GTF3C2.H9 188 bp overlap
Hand1 2 datasets
Motif DE_12h DE_12h-Hand1_MA2123.1 9 bp overlap
Motif DE_24h DE_24h-Hand1_MA2123.1 9 bp overlap
JUN 1 dataset
ChIP DE_D1 S40-DE-d1-JUN-exp2 284 bp overlap
MEIS1 2 datasets
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
Motif ES_0h ES_0h-MEIS1_MA0498.3 5 bp overlap
NR1I2 2 datasets
Motif DE_12h DE_12h-NR1I2_MA1533.2 15 bp overlap
Motif ES_0h ES_0h-NR1I2_MA1533.2 15 bp overlap
NR2C1 2 datasets
Motif DE_12h DE_12h-NR2C1_MA1535.2 6 bp overlap
Motif ES_0h ES_0h-NR2C1_MA1535.2 6 bp overlap
NR2C2 2 datasets
Motif DE_12h DE_12h-NR2C2_MA1536.2 6 bp overlap
Motif ES_0h ES_0h-NR2C2_MA1536.2 6 bp overlap
Nr1H2 2 datasets
Motif DE_12h DE_12h-Nr1H2_MA1996.2 6 bp overlap
Motif ES_0h ES_0h-Nr1H2_MA1996.2 6 bp overlap
Nr1H4 2 datasets
Motif DE_12h DE_12h-Nr1H4_MA1110.3 6 bp overlap
Motif ES_0h ES_0h-Nr1H4_MA1110.3 6 bp overlap
Nr1h3 2 datasets
Motif DE_12h DE_12h-Nr1h3_MA2337.1 6 bp overlap
Motif ES_0h ES_0h-Nr1h3_MA2337.1 6 bp overlap
ONECUT1 2 datasets
Motif DE_12h DE_12h-ONECUT1_MA0679.3 9 bp overlap
Motif ES_0h ES_0h-ONECUT1_MA0679.3 9 bp overlap
ONECUT3 2 datasets
Motif DE_12h DE_12h-ONECUT3_MA0757.2 12 bp overlap
Motif ES_0h ES_0h-ONECUT3_MA0757.2 12 bp overlap
PAX3 2 datasets
Motif DE_12h DE_12h-PAX3_MA0780.1 10 bp overlap
Motif ES_0h ES_0h-PAX3_MA0780.1 10 bp overlap
PDX1 1 dataset
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 161 bp overlap
PHOX2A 2 datasets
Motif DE_12h DE_12h-PHOX2A_MA0713.1 11 bp overlap
Motif ES_0h ES_0h-PHOX2A_MA0713.1 11 bp overlap
PKNOX1 4 datasets
Motif DE_12h DE_12h-PKNOX1_MA0782.3 10 bp overlap
Motif ES_0h ES_0h-PKNOX1_MA0782.3 10 bp overlap
ChIP HEK293T ENCFF174WDB 391 bp overlap
ChIP HEK293T ENCSR233FAG.PKNOX1.HEK293T 245 bp overlap
POU4F1 2 datasets
Motif DE_12h DE_12h-POU4F1_MA0790.2 12 bp overlap
Motif ES_0h ES_0h-POU4F1_MA0790.2 12 bp overlap
POU4F2 2 datasets
Motif DE_12h DE_12h-POU4F2_MA0683.2 15 bp overlap
Motif ES_0h ES_0h-POU4F2_MA0683.2 15 bp overlap
POU4F3 2 datasets
Motif DE_12h DE_12h-POU4F3_MA0791.2 12 bp overlap
Motif ES_0h ES_0h-POU4F3_MA0791.2 12 bp overlap
Pax7 2 datasets
Motif DE_12h DE_12h-Pax7_MA0680.3 10 bp overlap
Motif ES_0h ES_0h-Pax7_MA0680.3 10 bp overlap
RAD21 2 datasets
ChIP H1 ENCFF698EWO 241 bp overlap
ChIP H1 ENCFF967OJF 245 bp overlap
RFX1 2 datasets
Motif DE_12h DE_12h-RFX1_MA0509.3 16 bp overlap
Motif ES_0h ES_0h-RFX1_MA0509.3 16 bp overlap
RFX3 2 datasets
Motif DE_12h DE_12h-RFX3_MA0798.3 16 bp overlap
Motif ES_0h ES_0h-RFX3_MA0798.3 16 bp overlap
RORA 4 datasets
Motif DE_12h DE_12h-RORA_MA0071.1 10 bp overlap
Motif DE_12h DE_12h-RORA_MA0072.2 11 bp overlap
Motif ES_0h ES_0h-RORA_MA0071.1 10 bp overlap
Motif ES_0h ES_0h-RORA_MA0072.2 11 bp overlap
RORB 2 datasets
Motif DE_12h DE_12h-RORB_MA1150.2 10 bp overlap
Motif ES_0h ES_0h-RORB_MA1150.2 10 bp overlap
RORC 2 datasets
Motif DE_12h DE_12h-RORC_MA1151.2 10 bp overlap
Motif ES_0h ES_0h-RORC_MA1151.2 10 bp overlap
Rhox11 2 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SMAD2 1 dataset
Motif DE_24h DE_24h-SMAD2_MA1964.2 6 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 281 bp overlap
SMAD2_3 1 dataset
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 282 bp overlap
SOX12 2 datasets
Motif DE_12h DE_12h-SOX12_MA1561.2 10 bp overlap
Motif ES_0h ES_0h-SOX12_MA1561.2 10 bp overlap
SOX14 2 datasets
Motif DE_12h DE_12h-SOX14_MA1562.2 9 bp overlap
Motif ES_0h ES_0h-SOX14_MA1562.2 9 bp overlap
SOX18 2 datasets
Motif DE_12h DE_12h-SOX18_MA1563.2 8 bp overlap
Motif ES_0h ES_0h-SOX18_MA1563.2 8 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 253 bp overlap
SOX9 2 datasets
Motif DE_12h DE_12h-SOX9_MA0077.2 8 bp overlap
Motif ES_0h ES_0h-SOX9_MA0077.2 8 bp overlap
Sox7 2 datasets
Motif DE_12h DE_12h-Sox7_MA2095.1 10 bp overlap
Motif ES_0h ES_0h-Sox7_MA2095.1 10 bp overlap
TEAD3 2 datasets
Motif DE_12h DE_12h-TEAD3_MA0808.1 8 bp overlap
Motif ES_0h ES_0h-TEAD3_MA0808.1 8 bp overlap
ZBTB17 2 datasets
Motif DE_12h DE_12h-ZBTB17_MA2102.1 8 bp overlap
Motif ES_0h ES_0h-ZBTB17_MA2102.1 8 bp overlap
ZBTB7C 2 datasets
Motif DE_12h DE_12h-ZBTB7C_MA0695.2 8 bp overlap
Motif DE_24h DE_24h-ZBTB7C_MA0695.2 8 bp overlap
ZEB1 3 datasets
Motif DE_12h DE_12h-ZEB1_MA0103.4 6 bp overlap
Motif DE_24h DE_24h-ZEB1_MA0103.4 6 bp overlap
Motif ES_0h ES_0h-ZEB1_MA0103.4 6 bp overlap
ZNF528 2 datasets
Motif DE_12h DE_12h-ZNF528_MA1597.1 17 bp overlap
Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap
ZNF85 2 datasets
Motif DE_12h DE_12h-ZNF85_MA1720.2 12 bp overlap
Motif ES_0h ES_0h-ZNF85_MA1720.2 12 bp overlap
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