chr12 : 106,021,571 – 106,021,925
354 bp 45 TFs 0 linked genes
This 354 bp open chromatin element has no linked target genes and is bound by 45 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:106,016,571 – 106,026,925
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 11 datasets
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 354 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 354 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 278 bp overlap
ChIP VCaP_Darolutamide GSE148358.AR.VCaP_Darolutamide 147 bp overlap
ChIP VCaP_R1881 GSE32892.AR.VCaP_R1881 176 bp overlap
ChIP VCaP_R1881_10C26 GSE32892.AR.VCaP_R1881_10C26 171 bp overlap
ChIP VCaP_R1881_10C30 GSE32892.AR.VCaP_R1881_10C30 130 bp overlap
ChIP VCaP_R1881_1C26 GSE32892.AR.VCaP_R1881_1C26 142 bp overlap
ChIP VCaP_R1881_1C30 GSE32892.AR.VCaP_R1881_1C30 140 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 181 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 226 bp overlap
BRD4 1 dataset
ChIP HUVEC-C GSE53998.BRD4.HUVEC-C 256 bp overlap
CTCF 1 dataset
ChIP heart_left-ventricle ENCSR718SDR.CTCF.heart_left-ventricle 325 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 114 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 255 bp overlap
EP300 1 dataset
ChIP pulmonary-artery_endothelial-cell_siCtrl GSE89786.EP300.pulmonary-artery_endothelial-cell_siCtrl 270 bp overlap
ERF 2 datasets
ChIP HAEC_TNFa_4h GSE89970.ERF.HAEC_TNFa_4h 156 bp overlap
ChIP VCaP_DOX GSE98809.ERF.VCaP_DOX 169 bp overlap
ERG 28 datasets
ChIP HAEC GSE89970.ERG.HAEC 143 bp overlap
ChIP HUVEC-C GSE128382.ERG.HUVEC-C 289 bp overlap
ChIP HUVEC-C GSE124891.ERG.HUVEC-C 273 bp overlap
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 186 bp overlap
ChIP VCaP_DHAT_2H GSE28950.ERG.VCaP_DHAT_2H 166 bp overlap
ChIP VCaP_ETOH GSE49091.ERG.VCaP_ETOH 153 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 229 bp overlap
ChIP VCaP_shARID1A GSE110655.ERG.VCaP_shARID1A 161 bp overlap
ChIP aortic-endothelial-cell_D1 GSE139377.ERG.aortic-endothelial-cell_D1 240 bp overlap
ChIP aortic-endothelial-cell_D13 GSE139377.ERG.aortic-endothelial-cell_D13 172 bp overlap
ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 265 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 267 bp overlap
ChIP aortic-endothelial-cell_D19 GSE139377.ERG.aortic-endothelial-cell_D19 230 bp overlap
ChIP aortic-endothelial-cell_D21 GSE139377.ERG.aortic-endothelial-cell_D21 181 bp overlap
ChIP aortic-endothelial-cell_D24 GSE139377.ERG.aortic-endothelial-cell_D24 213 bp overlap
ChIP aortic-endothelial-cell_D26 GSE139377.ERG.aortic-endothelial-cell_D26 168 bp overlap
ChIP aortic-endothelial-cell_D28 GSE139377.ERG.aortic-endothelial-cell_D28 289 bp overlap
ChIP aortic-endothelial-cell_D33 GSE139377.ERG.aortic-endothelial-cell_D33 201 bp overlap
ChIP aortic-endothelial-cell_D39 GSE139377.ERG.aortic-endothelial-cell_D39 304 bp overlap
ChIP aortic-endothelial-cell_D4 GSE139377.ERG.aortic-endothelial-cell_D4 326 bp overlap
ChIP aortic-endothelial-cell_D40 GSE139377.ERG.aortic-endothelial-cell_D40 254 bp overlap
ChIP aortic-endothelial-cell_D46 GSE139377.ERG.aortic-endothelial-cell_D46 236 bp overlap
ChIP aortic-endothelial-cell_D47 GSE139377.ERG.aortic-endothelial-cell_D47 216 bp overlap
ChIP aortic-endothelial-cell_D49 GSE139377.ERG.aortic-endothelial-cell_D49 307 bp overlap
ChIP aortic-endothelial-cell_D5 GSE139377.ERG.aortic-endothelial-cell_D5 241 bp overlap
ChIP aortic-endothelial-cell_D51 GSE139377.ERG.aortic-endothelial-cell_D51 252 bp overlap
ChIP aortic-endothelial-cell_D53 GSE139377.ERG.aortic-endothelial-cell_D53 247 bp overlap
ChIP arterial-endothelial-cells GSE128382.ERG.arterial-endothelial-cells 202 bp overlap
ETS1 1 dataset
ChIP HUVEC-C_VEGF_12H GSE41166.ETS1.HUVEC-C_VEGF_12H 175 bp overlap
FLI1 1 dataset
ChIP HUVEC-C GSE109695.FLI1.HUVEC-C 283 bp overlap
FOS 2 datasets
ChIP endothelial cell of umbilical vein ENCFF415XBG 339 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVU.FOS.endothelial_umbilical-vein 279 bp overlap
FOXA1 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 294 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 265 bp overlap
FOXA2 5 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 212 bp overlap
ChIP DE DE-FOXA2-1 354 bp overlap
ChIP DE DE-FOXA2-2 354 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 231 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 243 bp overlap
GABPA 1 dataset
ChIP VCaP_ETOH GSE49091.GABPA.VCaP_ETOH 130 bp overlap
GATA2 5 datasets
ChIP TF1 GSE73207.GATA2.TF1 312 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 182 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 155 bp overlap
ChIP endothelial cell of umbilical vein ENCFF148NLK 284 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EVW.GATA2.endothelial_umbilical-vein 354 bp overlap
GATA4 7 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 175 bp overlap
ChIP DE DE-GATA4-1 354 bp overlap
ChIP DE DE-GATA4-2 354 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 249 bp overlap
ChIP foregut GSE117136.GATA4.foregut 307 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 354 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 354 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 354 bp overlap
ChIP DE DE-GATA6-2 354 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 269 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 320 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 324 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 294 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 348 bp overlap
ChIP foregut GSE117136.GATA6.foregut 265 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 348 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 327 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 341 bp overlap
HMBOX1 1 dataset
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 153 bp overlap
HMGB2 1 dataset
ChIP HUVEC-C GSE98245.HMGB2.HUVEC-C 206 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF354NRH 354 bp overlap
JUN 3 datasets
ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 322 bp overlap
ChIP HAEC_TNFa_4h GSE89970.JUN.HAEC_TNFa_4h 279 bp overlap
ChIP endothelial_umbilical-vein ENCSR000EFA.JUN.endothelial_umbilical-vein 140 bp overlap
JUNB 1 dataset
ChIP HAEC GSE89970.JUNB.HAEC 235 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 205 bp overlap
ChIP pancreatic-progenitor_PP2-KDM1A-inh GSE104840.KDM1A.pancreatic-progenitor_PP2-KDM1A-inh 262 bp overlap
MYC 1 dataset
ChIP PAVE GSE47152.MYC.PAVE 158 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 222 bp overlap
NR2F2 3 datasets
ChIP liver ENCFF565JGD 354 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 291 bp overlap
ChIP liver ENCSR338MMB.NR2F2.liver 151 bp overlap
PDX1 1 dataset
ChIP hESC GSE58685.PDX1.hESC 171 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF303XUJ 354 bp overlap
RAD21 4 datasets
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 263 bp overlap
ChIP liver ENCFF485PAC 354 bp overlap
ChIP liver ENCFF485PAC 194 bp overlap
ChIP liver ENCFF522JHE 333 bp overlap
RELA 33 datasets
ChIP HAEC_IL1b_4h GSE89970.RELA.HAEC_IL1b_4h 286 bp overlap
ChIP HAEC_TNFa_4h GSE89970.RELA.HAEC_TNFa_4h 302 bp overlap
ChIP HUVEC-C_TNF GSE53998.RELA.HUVEC-C_TNF 266 bp overlap
ChIP HUVEC-C_TNF_JQ1 GSE53998.RELA.HUVEC-C_TNF_JQ1 210 bp overlap
ChIP aortic-endothelial-cell_IL1B_D10 GSE139377.RELA.aortic-endothelial-cell_IL1B_D10 201 bp overlap
ChIP aortic-endothelial-cell_IL1B_D11 GSE139377.RELA.aortic-endothelial-cell_IL1B_D11 218 bp overlap
ChIP aortic-endothelial-cell_IL1B_D13 GSE139377.RELA.aortic-endothelial-cell_IL1B_D13 299 bp overlap
ChIP aortic-endothelial-cell_IL1B_D14 GSE139377.RELA.aortic-endothelial-cell_IL1B_D14 354 bp overlap
ChIP aortic-endothelial-cell_IL1B_D16 GSE139377.RELA.aortic-endothelial-cell_IL1B_D16 350 bp overlap
ChIP aortic-endothelial-cell_IL1B_D2 GSE139377.RELA.aortic-endothelial-cell_IL1B_D2 354 bp overlap
ChIP aortic-endothelial-cell_IL1B_D21 GSE139377.RELA.aortic-endothelial-cell_IL1B_D21 347 bp overlap
ChIP aortic-endothelial-cell_IL1B_D22 GSE139377.RELA.aortic-endothelial-cell_IL1B_D22 277 bp overlap
ChIP aortic-endothelial-cell_IL1B_D25 GSE139377.RELA.aortic-endothelial-cell_IL1B_D25 287 bp overlap
ChIP aortic-endothelial-cell_IL1B_D26 GSE139377.RELA.aortic-endothelial-cell_IL1B_D26 354 bp overlap
ChIP aortic-endothelial-cell_IL1B_D27 GSE139377.RELA.aortic-endothelial-cell_IL1B_D27 303 bp overlap
ChIP aortic-endothelial-cell_IL1B_D28 GSE139377.RELA.aortic-endothelial-cell_IL1B_D28 294 bp overlap
ChIP aortic-endothelial-cell_IL1B_D3 GSE139377.RELA.aortic-endothelial-cell_IL1B_D3 205 bp overlap
ChIP aortic-endothelial-cell_IL1B_D31 GSE139377.RELA.aortic-endothelial-cell_IL1B_D31 337 bp overlap
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 331 bp overlap
ChIP aortic-endothelial-cell_IL1B_D35 GSE139377.RELA.aortic-endothelial-cell_IL1B_D35 264 bp overlap
ChIP aortic-endothelial-cell_IL1B_D38 GSE139377.RELA.aortic-endothelial-cell_IL1B_D38 265 bp overlap
ChIP aortic-endothelial-cell_IL1B_D39 GSE139377.RELA.aortic-endothelial-cell_IL1B_D39 309 bp overlap
ChIP aortic-endothelial-cell_IL1B_D4 GSE139377.RELA.aortic-endothelial-cell_IL1B_D4 340 bp overlap
ChIP aortic-endothelial-cell_IL1B_D40 GSE139377.RELA.aortic-endothelial-cell_IL1B_D40 310 bp overlap
ChIP aortic-endothelial-cell_IL1B_D41 GSE139377.RELA.aortic-endothelial-cell_IL1B_D41 309 bp overlap
ChIP aortic-endothelial-cell_IL1B_D45 GSE139377.RELA.aortic-endothelial-cell_IL1B_D45 244 bp overlap
ChIP aortic-endothelial-cell_IL1B_D47 GSE139377.RELA.aortic-endothelial-cell_IL1B_D47 284 bp overlap
ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 221 bp overlap
ChIP aortic-endothelial-cell_IL1B_D53 GSE139377.RELA.aortic-endothelial-cell_IL1B_D53 214 bp overlap
ChIP aortic-endothelial-cell_IL1B_D6 GSE139377.RELA.aortic-endothelial-cell_IL1B_D6 295 bp overlap
ChIP aortic-endothelial-cell_IL1B_D7 GSE139377.RELA.aortic-endothelial-cell_IL1B_D7 292 bp overlap
ChIP aortic-endothelial-cell_IL1B_D8 GSE139377.RELA.aortic-endothelial-cell_IL1B_D8 334 bp overlap
ChIP aortic-endothelial-cell_IL1B_D9 GSE139377.RELA.aortic-endothelial-cell_IL1B_D9 354 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 354 bp overlap
SMAD2-3 2 datasets
ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 113 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 328 bp overlap
SMC1 1 dataset
ChIP HCAEC GSE101921.SMC1.HCAEC 354 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 343 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 310 bp overlap
SOX8 1 dataset
ChIP RH4 GSE116344.SOX8.RH4 115 bp overlap
SP1 1 dataset
ChIP liver ENCFF769YSM 354 bp overlap
SPI1 1 dataset
ChIP CD34_FETAL GSE70660.SPI1.CD34_FETAL 201 bp overlap
STAG1 1 dataset
ChIP HCAEC GSE101921.STAG1.HCAEC 162 bp overlap
STAG2 1 dataset
ChIP HCAEC GSE101921.STAG2.HCAEC 297 bp overlap
STAT1_pS727 1 dataset
ChIP SET-2 GSE100566.STAT1_pS727.SET-2 319 bp overlap
TAL1 1 dataset
ChIP K-562 GSE107726.TAL1.K-562 165 bp overlap
TRIM28 2 datasets
ChIP HEK293 ENCFF582MWI 354 bp overlap
ChIP HEK293 ENCSR000EUZ.TRIM28.HEK293 354 bp overlap
ZIM3 1 dataset
ChIP HEK293 GSE76494.ZIM3.HEK293 52 bp overlap
ZSCAN5C 2 datasets
ChIP HEK293 ENCFF343DTU 308 bp overlap
ChIP HEK293 ENCSR731AGO.ZSCAN5C.HEK293 307 bp overlap
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