Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

48 transcription factors

ASXL3 2 datasets

ChIP NCI-H1963_Ab1 GSE145028.ASXL3.NCI-H1963_Ab1 299 bp overlap

ChIP NCI-H1963_Ab2 GSE145028.ASXL3.NCI-H1963_Ab2 81 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shASXL3 GSE145028.BAP1.NCI-H1963_shASXL3 372 bp overlap

BRD4 5 datasets

ChIP NCI-H1963 GSE145028.BRD4.NCI-H1963 294 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 109 bp overlap

ChIP NCI-H1963_shASXL3 GSE145028.BRD4.NCI-H1963_shASXL3 222 bp overlap

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 465 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 167 bp overlap

CBX2 2 datasets

ChIP K-562 ENCSR000ATU.CBX2.K-562 589 bp overlap

ChIP K-562 GSE121182.CBX2.K-562 289 bp overlap

CTCF 2 datasets

Motif DE_36h DE_36h-CTCF_MA1930.2 33 bp overlap

ChIP esophagus-muscularis-mucosa ENCSR443WKD.CTCF.esophagus-muscularis-mucosa 152 bp overlap

DUX4 2 datasets

ChIP HEK293 GSE75791.DUX4.HEK293 250 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 333 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 196 bp overlap

ERG 1 dataset

ChIP VCaP GSE49091.ERG.VCaP 182 bp overlap

ETS1 1 dataset

ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 329 bp overlap

EZH2 1 dataset

ChIP DND41 ENCSR000ASW.EZH2.DND41 488 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 342 bp overlap

ChIP DE DE-FOXA2-2 396 bp overlap

FOXO1::ELF1 1 dataset

Motif DE_36h DE_36h-FOXO1ELF1_MA1953.2 13 bp overlap

FOXO1::ELK1 1 dataset

Motif DE_36h DE_36h-FOXO1ELK1_MA1954.2 13 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 484 bp overlap

ChIP DE DE-GATA4-2 419 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 301 bp overlap

ChIP DE DE-GATA6-2 384 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 532 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 512 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 462 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 440 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 589 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 531 bp overlap

Hmx3 1 dataset

Motif DE_36h DE_36h-Hmx3_MA0898.2 9 bp overlap

ISL2 1 dataset

Motif DE_36h DE_36h-ISL2_MA0914.2 6 bp overlap

JUN 3 datasets

ChIP DE_D1 S08-DE-d1-JUN-exp1 319 bp overlap

ChIP DE_D1 S40-DE-d1-JUN-exp2 383 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 383 bp overlap

MEIS1 1 dataset

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

MGA::EVX1 1 dataset

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

NR1D2 1 dataset

Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap

Nkx3-2 1 dataset

Motif DE_36h DE_36h-Nkx3-2_MA0122.4 10 bp overlap

ONECUT2 2 datasets

ChIP A-549 GSE102599.ONECUT2.A-549 301 bp overlap

ChIP A-549 GSE102599.ONECUT2.A-549 171 bp overlap

OSR2 2 datasets

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 204 bp overlap

ChIP HEK293 GSE76494.OSR2.HEK293 161 bp overlap

PAX3 1 dataset

Motif DE_36h DE_36h-PAX3_MA0780.1 10 bp overlap

PGR 1 dataset

Motif DE_36h DE_36h-PGR_MA2327.1 9 bp overlap

PHOX2A 1 dataset

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 1 dataset

Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap

PRDM9 1 dataset

Motif DE_36h DE_36h-PRDM9_MA1723.2 20 bp overlap

PROP1 1 dataset

Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap

RNF2 5 datasets

ChIP K-562 ENCSR138FUZ.RNF2.K-562 183 bp overlap

ChIP K-562 ENCSR076YPO.RNF2.K-562 276 bp overlap

ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 272 bp overlap

ChIP SYO-1_shCt GSE139053.RNF2.SYO-1_shCt 121 bp overlap

ChIP SYO-1_shRING1A-B GSE139053.RNF2.SYO-1_shRING1A-B 131 bp overlap

Rarg 1 dataset

Motif DE_36h DE_36h-Rarg_MA0860.1 17 bp overlap

SCRT1 1 dataset

Motif DE_36h DE_36h-SCRT1_MA0743.3 10 bp overlap

SCRT2 1 dataset

Motif DE_36h DE_36h-SCRT2_MA0744.3 10 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 444 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 457 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 384 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 400 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 353 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 229 bp overlap

SMARCA4 1 dataset

ChIP K-562 ENCSR643VTW.SMARCA4.K-562 460 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S10-DE-d1-BAF155-exp1 462 bp overlap

ChIP DE_D1 S15-DE-d1-BAF155-exp1 411 bp overlap

SREBF1 2 datasets

Motif DE_36h DE_36h-SREBF1_MA0595.1 10 bp overlap

Motif DE_36h DE_36h-SREBF1_MA0829.3 10 bp overlap

SREBF2 1 dataset

Motif DE_36h DE_36h-SREBF2_MA0596.1 10 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 266 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 291 bp overlap

TBX20 1 dataset

Motif DE_36h DE_36h-TBX20_MA0689.1 11 bp overlap

THRA 1 dataset

Motif DE_36h DE_36h-THRA_MA1969.2 18 bp overlap

THRB 1 dataset

Motif DE_36h DE_36h-THRB_MA1576.2 18 bp overlap

ZFP36 1 dataset

ChIP K-562 ENCSR776CYN.ZFP36.K-562 179 bp overlap

ZNF317 1 dataset

ChIP HEK293 GSE76494.ZNF317.HEK293 182 bp overlap

ZNF354A 1 dataset

Motif DE_36h DE_36h-ZNF354A_MA1978.2 20 bp overlap

ZNF675 1 dataset

Motif DE_36h DE_36h-ZNF675_MA1714.2 19 bp overlap

Genome Browser