chr12 : 46,832,412 46,832,610
198 bp 32 TFs 1 linked gene
This 198 bp open chromatin element is linked to SLC38A4 and is bound by 32 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
SLC38A4 4 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:46,827,412 – 46,837,610
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
AR 1 dataset
ChIP MCF-7 GSE48930.AR.MCF-7 133 bp overlap
CDKN1B 1 dataset
ChIP MDA-MB-231_p27CK-DD GSE112444.CDKN1B.MDA-MB-231_p27CK-DD 142 bp overlap
CREB1 1 dataset
ChIP WA01 ENCSR000BSN.CREB1.WA01 126 bp overlap
E2F6 1 dataset
ChIP WA01 ENCSR000BSI.E2F6.WA01 189 bp overlap
EGR1 1 dataset
ChIP liver ENCSR736BUG.EGR1.liver 71 bp overlap
ESR1 2 datasets
ChIP Ishikawa_DMSO_D538G_clone3 GSE132426.ESR1.Ishikawa_DMSO_D538G_clone3 141 bp overlap
ChIP MCF-7_aldosterone GSE99626.ESR1.MCF-7_aldosterone 198 bp overlap
EZH2 2 datasets
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 90 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 165 bp overlap
FOXA1 1 dataset
ChIP liver ENCSR735KEY.FOXA1.liver 140 bp overlap
FOXA2 1 dataset
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 165 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 137 bp overlap
GABPA 1 dataset
ChIP liver ENCSR038GMB.GABPA.liver 154 bp overlap
HNF4A 1 dataset
ChIP liver ENCFF449HPV 198 bp overlap
JUND 1 dataset
ChIP liver ENCSR837GTK.JUND.liver 115 bp overlap
MAX 2 datasets
ChIP WA01 ENCSR000EUP.MAX.WA01 139 bp overlap
ChIP liver ENCSR521IID.MAX.liver 134 bp overlap
MED1 1 dataset
ChIP HCT-116_shLuc GSE121798.MED1.HCT-116_shLuc 161 bp overlap
MITF 1 dataset
ChIP 501-mel GSE137522.MITF.501-mel 198 bp overlap
MYOD1 3 datasets
ChIP RD GSE137168.MYOD1.RD 111 bp overlap
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 198 bp overlap
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 142 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 154 bp overlap
POU5F1 1 dataset
ChIP BG03 GSE21614.POU5F1.BG03 144 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 198 bp overlap
REST 1 dataset
ChIP liver ENCSR867WPH.REST.liver 146 bp overlap
RXRA 1 dataset
ChIP liver ENCFF807CIA 141 bp overlap
SIX2 2 datasets
ChIP HEK GSE73865.SIX2.HEK 175 bp overlap
ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 185 bp overlap
SP1 4 datasets
ChIP H1 ENCFF263FUH 194 bp overlap
ChIP WA01 ENCSR000BIR.SP1.WA01 161 bp overlap
ChIP liver ENCFF597LFJ 123 bp overlap
ChIP liver ENCFF769YSM 198 bp overlap
SUZ12 2 datasets
ChIP LNCaP-abl GSE39459.SUZ12.LNCaP-abl 181 bp overlap
ChIP hiPSC GSE124903.SUZ12.hiPSC 198 bp overlap
TAF1 2 datasets
ChIP SK-N-SH ENCSR000BQF.TAF1.SK-N-SH 100 bp overlap
ChIP liver ENCFF972HXJ 198 bp overlap
TBP 1 dataset
ChIP hESC GSE122298.TBP.hESC 124 bp overlap
USF1 5 datasets
ChIP H1 ENCFF090WVU 152 bp overlap
ChIP SK-N-SH ENCFF967PDP 195 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 142 bp overlap
ChIP SK-N-SH ENCSR000BTZ.USF1.SK-N-SH 94 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 155 bp overlap
USF2 1 dataset
ChIP WTC11 ENCFF139JAW 198 bp overlap
ZNF479 1 dataset
ChIP HEK293T GSE78099.ZNF479.HEK293T 83 bp overlap