chr12 : 8,537,905 – 8,538,096
191 bp 32 TFs 0 linked genes
This 191 bp open chromatin element has no linked target genes and is bound by 32 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:8,532,905 – 8,543,096
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
32 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP K562 ENCFF308SKS 191 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 114 bp overlap
CEBPA 1 dataset
ChIP MV4-11 GSE88746.CEBPA.MV4-11 191 bp overlap
CREB1 2 datasets
ChIP A-549 ENCSR000BRB.CREB1.A-549 173 bp overlap
ChIP H1 ENCFF955PMP 191 bp overlap
CREM 2 datasets
ChIP K-562 ENCSR077DKV.CREM.K-562 98 bp overlap
ChIP K562 ENCFF180STA 191 bp overlap
CTCF 183 datasets
ChIP 22Rv1 ENCFF466OXN 191 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 191 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 191 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 191 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 177 bp overlap
ChIP A-549 ENCSR000DYD.CTCF.A-549 134 bp overlap
ChIP A-549 ENCSR000BHV.CTCF.A-549 108 bp overlap
ChIP A549 ENCFF034FVO 159 bp overlap
ChIP A549 ENCFF182TCQ 139 bp overlap
ChIP A549 ENCFF434LUY 191 bp overlap
ChIP A549 ENCFF669BWC 191 bp overlap
ChIP A673 ENCFF123WOM 151 bp overlap
ChIP AG09309 ENCFF478XPS 191 bp overlap
ChIP AG10803 ENCFF549AQK 191 bp overlap
ChIP BE2C ENCFF757SRF 191 bp overlap
ChIP BJ ENCFF434HEC 191 bp overlap
ChIP C4-2B ENCFF821XVN 191 bp overlap
ChIP CD14-positive monocyte ENCFF590KQU 191 bp overlap
ChIP Caco-2 ENCFF753NZV 191 bp overlap
ChIP Caco-2 ENCFF753NZV 155 bp overlap
ChIP Caco-2 ENCFF934QYS 191 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 184 bp overlap
ChIP D721Med ENCFF513FYD 186 bp overlap
ChIP DND-41 ENCFF913MRA 191 bp overlap
ChIP DOHH2 ENCFF637WNW 175 bp overlap
ChIP FT282 GSE131931.CTCF.FT282 146 bp overlap
ChIP FT282_EV GSE131931.CTCF.FT282_EV 155 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 185 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 155 bp overlap
ChIP GM06990 ENCFF471OQT 191 bp overlap
ChIP GM06990 ENCSR000DQW.CTCF.GM06990 191 bp overlap
ChIP GM10266 ENCFF241YYF 144 bp overlap
ChIP GM12801 ENCSR000DQY.CTCF.GM12801 177 bp overlap
ChIP GM12864 ENCFF357DQE 151 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 176 bp overlap
ChIP GM12865 ENCFF067GFI 81 bp overlap
ChIP GM12865 ENCSR000DRE.CTCF.GM12865 174 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 98 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 191 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 155 bp overlap
ChIP GM12872 ENCFF697BYI 191 bp overlap
ChIP GM12872 ENCSR000DRN.CTCF.GM12872 161 bp overlap
ChIP GM12873 ENCFF711LOS 191 bp overlap
ChIP GM12875 ENCFF081UCQ 191 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 172 bp overlap
ChIP GM12878 ENCFF217EAX 191 bp overlap
ChIP GM12878 ENCFF485TGR 191 bp overlap
ChIP GM12878 ENCFF511URZ 191 bp overlap
ChIP GM12878 ENCFF635MMB 191 bp overlap
ChIP GM12878 ENCSR000DKV.CTCF.GM12878 170 bp overlap
ChIP GM12878 ENCSR000DRZ.CTCF.GM12878 120 bp overlap
ChIP GM12878 ENCSR000DZN.CTCF.GM12878 101 bp overlap
ChIP GM13977 ENCFF528ESQ 161 bp overlap
ChIP GM23338 ENCFF531QOI 191 bp overlap
ChIP GM23338 ENCFF772DML 147 bp overlap
ChIP GM23338 ENCFF832KWE 191 bp overlap
ChIP H1 ENCFF230QSV 165 bp overlap
ChIP H1 ENCFF414GZI 191 bp overlap
ChIP H1 ENCFF764RHO 170 bp overlap
ChIP H54 ENCFF255TVO 138 bp overlap
ChIP H9 ENCFF152GTF 191 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 161 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 169 bp overlap
ChIP HCT116 ENCFF003KHP 183 bp overlap
ChIP HCT116 ENCFF209YMI 116 bp overlap
ChIP HCT116 ENCFF373YMA 191 bp overlap
ChIP HEK293 ENCFF498RMM 191 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 131 bp overlap
ChIP HFF-Myc ENCFF680WYR 191 bp overlap
ChIP HFFc6 ENCFF005CJI 191 bp overlap
ChIP HL-60 ENCFF833OFP 191 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 180 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 156 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 191 bp overlap
ChIP HeLa-S3 ENCFF565UFR 158 bp overlap
ChIP HeLa-S3 ENCFF626XQK 96 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 191 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 191 bp overlap
ChIP HeLa-S3 ENCSR000DLO.CTCF.HeLa-S3 109 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 159 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 130 bp overlap
ChIP HepG2 ENCFF127KUP 175 bp overlap
ChIP HepG2 ENCFF194VBQ 191 bp overlap
ChIP HepG2 ENCFF348BUL 185 bp overlap
ChIP HepG2 ENCFF668CTD 145 bp overlap
ChIP HepG2 ENCFF757EKU 191 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 180 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 168 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 169 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 130 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 122 bp overlap
ChIP K562 ENCFF082GOI 182 bp overlap
ChIP K562 ENCFF111MGE 191 bp overlap
ChIP K562 ENCFF400DFR 191 bp overlap
ChIP K562 ENCFF430KTH 145 bp overlap
ChIP K562 ENCFF598YSU 191 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 191 bp overlap
ChIP KB_5Z GSE134435.CTCF.KB_5Z 114 bp overlap
ChIP KB_IL-1_5Z GSE134435.CTCF.KB_IL-1_5Z 165 bp overlap
ChIP LNCAP ENCFF223HIG 191 bp overlap
ChIP LNCAP ENCFF700QXT 191 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 164 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 161 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 165 bp overlap
ChIP Loucy ENCFF359TVQ 173 bp overlap
ChIP MCF-7 ENCFF139NQI 191 bp overlap
ChIP MCF-7 ENCFF162GNE 191 bp overlap
ChIP MCF-7 ENCFF198DQX 191 bp overlap
ChIP MCF-7 ENCFF414SZG 101 bp overlap
ChIP MCF-7 ENCFF424NQR 165 bp overlap
ChIP MCF-7 ENCFF494VXA 191 bp overlap
ChIP MCF-7 ENCFF844STM 177 bp overlap
ChIP MCF-7 ENCFF954TUV 191 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 131 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 172 bp overlap
ChIP NB4 ENCFF155DNY 178 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 150 bp overlap
ChIP OCI-LY1 ENCFF455ESK 191 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 191 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 191 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 185 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 187 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 191 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 155 bp overlap
ChIP PC-3 ENCFF487TUI 191 bp overlap
ChIP PC-9 ENCFF539ULB 146 bp overlap
ChIP PC-9 ENCFF539ULB 191 bp overlap
ChIP Panc1 ENCFF056JQX 191 bp overlap
ChIP Peyer's patch ENCFF742AQK 191 bp overlap
ChIP RWPE2 ENCFF911IEE 191 bp overlap
ChIP SEM GSE117864.CTCF.SEM 146 bp overlap
ChIP SK-N-SH ENCFF575DMG 191 bp overlap
ChIP SK-N-SH ENCFF731NJX 191 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 191 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 122 bp overlap
ChIP SK-N-SH ENCSR000BLX.CTCF.SK-N-SH 99 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 190 bp overlap
ChIP VCaP ENCFF858YQT 191 bp overlap
ChIP VCaP ENCFF858YQT 191 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 116 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 164 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 179 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 153 bp overlap
ChIP WTC11 ENCFF658QVH 191 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 191 bp overlap
ChIP astrocyte of the spinal cord ENCFF213GKL 189 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 110 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 191 bp overlap
ChIP cardiac fibroblast ENCFF326EDY 191 bp overlap
ChIP chondrocyte ENCFF134ORZ 191 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 191 bp overlap
ChIP endodermal cell ENCFF471YCZ 191 bp overlap
ChIP endothelial cell ENCFF663LIE 191 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 117 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 191 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 191 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 191 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 152 bp overlap
ChIP fibroblast of mammary gland ENCFF109AZU 191 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 191 bp overlap
ChIP fibroblast of villous mesenchyme ENCFF345VQO 191 bp overlap
ChIP fibroblast_VILLOUS_MESENCHYME ENCSR000DVQ.CTCF.fibroblast_VILLOUS_MESENCHYME 154 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 191 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 157 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 135 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 125 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP keratinocyte ENCFF046PBT 166 bp overlap
ChIP keratinocyte ENCFF667ULX 191 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 176 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 100 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 191 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 191 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 191 bp overlap
ChIP neural crest cell ENCFF182LWK 191 bp overlap
ChIP neural progenitor cell ENCFF420RBO 191 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 130 bp overlap
ChIP neutrophil ENCFF770HHA 191 bp overlap
ChIP osteocyte ENCFF929FPD 161 bp overlap
ChIP placenta ENCFF029PHY 191 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 190 bp overlap
ChIP smooth muscle cell ENCFF656FBT 166 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 191 bp overlap
EP300 2 datasets
ChIP AML GSE131939.EP300.AML 85 bp overlap
ChIP Kasumi-1 GSE115115.EP300.Kasumi-1 63 bp overlap
ERG 5 datasets
ChIP ME-1 GSE46044.ERG.ME-1 191 bp overlap
ChIP SEM GSE117864.ERG.SEM 129 bp overlap
ChIP SKNO-1 GSE23730.ERG.SKNO-1 191 bp overlap
ChIP TSU-1621MT GSE60477.ERG.TSU-1621MT 74 bp overlap
ChIP TSU-1621MT_ATRA GSE60477.ERG.TSU-1621MT_ATRA 79 bp overlap
FLI1 3 datasets
ChIP NB4 GSE23730.FLI1.NB4 55 bp overlap
ChIP SEM GSE117864.FLI1.SEM 71 bp overlap
ChIP SKNO-1 GSE23730.FLI1.SKNO-1 191 bp overlap
HSF1 2 datasets
ChIP MO91 GSE45852.HSF1.MO91 188 bp overlap
ChIP MO91_27A_20UM GSE45852.HSF1.MO91_27A_20UM 190 bp overlap
JMJD1C 2 datasets
ChIP Kasumi-1 GSE63484.JMJD1C.Kasumi-1 157 bp overlap
ChIP NB4 GSE63484.JMJD1C.NB4 151 bp overlap
LDB1 2 datasets
ChIP Kasumi-1_ctrl GSE121280.LDB1.Kasumi-1_ctrl 99 bp overlap
ChIP Kasumi-1_siRE GSE121280.LDB1.Kasumi-1_siRE 89 bp overlap
LMO2 3 datasets
ChIP Kasumi-1 GSE43834.LMO2.Kasumi-1 72 bp overlap
ChIP Kasumi-1_SICTR GSE60130.LMO2.Kasumi-1_SICTR 191 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.LMO2.Kasumi-1_SIRUNX1ETO 116 bp overlap
MAX 1 dataset
ChIP NB4 ENCFF966MWB 130 bp overlap
MYB 1 dataset
ChIP SEM GSE117864.MYB.SEM 75 bp overlap
MYC 1 dataset
ChIP NB4 ENCFF142PRP 191 bp overlap
NFKB1 1 dataset
ChIP L1236 GSE63736.NFKB1.L1236 126 bp overlap
NR4A1 1 dataset
ChIP Kasumi-1 GSE79491.NR4A1.Kasumi-1 66 bp overlap
PAX5 3 datasets
ChIP GM12878 ENCSR000BHD.PAX5.GM12878 124 bp overlap
ChIP GM12892 ENCFF635MSF 191 bp overlap
ChIP GM12892 ENCSR000BJI.PAX5.GM12892 134 bp overlap
POLR2A 2 datasets
ChIP HL-60 ENCFF321XKE 191 bp overlap
ChIP spleen ENCFF706IUS 191 bp overlap
RAD21 16 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 124 bp overlap
ChIP A549 ENCFF047SFC 191 bp overlap
ChIP A549 ENCFF264AHX 151 bp overlap
ChIP A549 ENCFF777QNW 191 bp overlap
ChIP GM12878 ENCFF046CBW 191 bp overlap
ChIP GM12878 ENCFF101UQZ 187 bp overlap
ChIP H1 ENCFF698EWO 137 bp overlap
ChIP H1 ENCFF967OJF 71 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 125 bp overlap
ChIP HCT116 ENCFF568PEO 191 bp overlap
ChIP HeLa-S3 ENCFF775CHI 191 bp overlap
ChIP HepG2 ENCFF906QIS 191 bp overlap
ChIP K-562 ENCSR000BKV.RAD21.K-562 116 bp overlap
ChIP K562 ENCFF169SQI 171 bp overlap
ChIP K562 ENCFF634XYR 191 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 137 bp overlap
RUNX1 9 datasets
ChIP BCP-ALL_patient1 GSE109377.RUNX1.BCP-ALL_patient1 191 bp overlap
ChIP Kasumi-1 GSE45738.RUNX1.Kasumi-1 191 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1.Kasumi-1 132 bp overlap
ChIP Kasumi-1 GSE62847.RUNX1.Kasumi-1 69 bp overlap
ChIP ME-1 GSE117138.RUNX1.ME-1 77 bp overlap
ChIP ME-1_CBFB-MYH11-KD GSE117138.RUNX1.ME-1_CBFB-MYH11-KD 76 bp overlap
ChIP ME-1_Con GSE128771.RUNX1.ME-1_Con 76 bp overlap
ChIP ME-1_KD GSE128771.RUNX1.ME-1_KD 77 bp overlap
ChIP NB4 GSE81992.RUNX1.NB4 83 bp overlap
RUNX1T1 5 datasets
ChIP Kasumi-1 GSE115115.RUNX1T1.Kasumi-1 173 bp overlap
ChIP Kasumi-1 GSE43834.RUNX1T1.Kasumi-1 166 bp overlap
ChIP Kasumi-1 GSE102697.RUNX1T1.Kasumi-1 165 bp overlap
ChIP Kasumi-1 GSE65427.RUNX1T1.Kasumi-1 152 bp overlap
ChIP Kasumi-1_CEBPA-ER GSE102697.RUNX1T1.Kasumi-1_CEBPA-ER 93 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMC1 1 dataset
ChIP HCT-116_RAD21-mAC GSE104888.SMC1.HCT-116_RAD21-mAC 143 bp overlap
SMC3 3 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 156 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 158 bp overlap
ChIP HeLa-S3 ENCFF992MML 191 bp overlap
SPI1 2 datasets
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 55 bp overlap
ChIP Kasumi-1_SIRUNX1ETO GSE60130.SPI1.Kasumi-1_SIRUNX1ETO 52 bp overlap
STAG1 3 datasets
ChIP HeLa GSE126990.STAG1.HeLa 178 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 181 bp overlap
ChIP HepG2 ENCFF843EBZ 191 bp overlap
TCF12 2 datasets
ChIP Kasumi-1 GSE23730.TCF12.Kasumi-1 188 bp overlap
ChIP Kasumi-1 GSE43834.TCF12.Kasumi-1 180 bp overlap
TCF3 1 dataset
ChIP Kasumi-1 GSE43834.TCF3.Kasumi-1 191 bp overlap
ZBTB33 2 datasets
ChIP GM12878 ENCFF818EFA 191 bp overlap
ChIP HepG2 ENCFF778UKV 98 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF281INV 183 bp overlap
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