chr12 : 7,304,557 – 7,305,187
630 bp 45 TFs 1 linked gene
This 630 bp open chromatin element is linked to ACSM4 and is bound by 45 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ACSM4 485 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:7,299,557 – 7,310,187
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 28 datasets
ChIP DU145 GSE47987.AR.DU145 231 bp overlap
ChIP DU145_ARQ6540X GSE47987.AR.DU145_ARQ6540X 229 bp overlap
ChIP DUCAP_ANDROGEN GSE70679.AR.DUCAP_ANDROGEN 140 bp overlap
ChIP LNCaP GSE85558.AR.LNCaP 186 bp overlap
ChIP LNCaP_Bag-1L_WT_DHT GSE89938.AR.LNCaP_Bag-1L_WT_DHT 241 bp overlap
ChIP LNCaP_DHT GSE114266.AR.LNCaP_DHT 237 bp overlap
ChIP LNCaP_DHT GSE125245.AR.LNCaP_DHT 133 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 168 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 215 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 315 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 213 bp overlap
ChIP LNCaP_Talen_DHT GSE89938.AR.LNCaP_Talen_DHT 237 bp overlap
ChIP LNCaP_androgen-N_hypoxia-N GSE114732.AR.LNCaP_androgen-N_hypoxia-N 221 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-N GSE114732.AR.LNCaP_androgen-Y_hypoxia-N 261 bp overlap
ChIP LNCaP_androgen-Y_hypoxia-Y GSE114732.AR.LNCaP_androgen-Y_hypoxia-Y 243 bp overlap
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 225 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 319 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 370 bp overlap
ChIP LTAD_siControl GSE94577.AR.LTAD_siControl 180 bp overlap
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 242 bp overlap
ChIP VCaP_DHAT_18H GSE28950.AR.VCaP_DHAT_18H 183 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 251 bp overlap
ChIP VCaP_R1881_30M GSE84432.AR.VCaP_R1881_30M 261 bp overlap
ChIP VCaP_R1881_4H GSE84432.AR.VCaP_R1881_4H 288 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 309 bp overlap
ChIP VCaP_SH1_R1881 GSE79128.AR.VCaP_SH1_R1881 300 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 337 bp overlap
ChIP VCaP_SH2_R1881 GSE79128.AR.VCaP_SH2_R1881 310 bp overlap
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 159 bp overlap
BRD3 1 dataset
ChIP H-1_DE GSE126661.BRD3.H-1_DE 249 bp overlap
BRD4 8 datasets
ChIP SUM159PT_30nMbortezomib_8h GSE87418.BRD4.SUM159PT_30nMbortezomib_8h 184 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 131 bp overlap
ChIP SUM159PT_DMSO_72h GSE87418.BRD4.SUM159PT_DMSO_72h 410 bp overlap
ChIP SUM159PT_DMSO_8h GSE87418.BRD4.SUM159PT_DMSO_8h 185 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 281 bp overlap
ChIP SUM159PT_KO GSE131097.BRD4.SUM159PT_KO 573 bp overlap
ChIP SUM159PT_scramble GSE131097.BRD4.SUM159PT_scramble 361 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 197 bp overlap
CCAR2 2 datasets
ChIP Hep-G2 ENCSR247XFV.CCAR2.Hep-G2 282 bp overlap
ChIP Hep-G2 GSE120104.CCAR2.Hep-G2 274 bp overlap
CEBPA 1 dataset
ChIP HepG2 ENCFF175DFS 305 bp overlap
CREB5 1 dataset
ChIP LNCaP GSE137775.CREB5.LNCaP 199 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 238 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF262VBH 377 bp overlap
ELF1 1 dataset
ChIP K-562 ENCSR000BMD.ELF1.K-562 79 bp overlap
EOMES 2 datasets
ChIP hESC GSE26097.EOMES.hESC 132 bp overlap
ChIP hESC GSE26097.EOMES.hESC 262 bp overlap
ERG 3 datasets
ChIP VCaP_DHAT_18H GSE28950.ERG.VCaP_DHAT_18H 122 bp overlap
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 177 bp overlap
ChIP aortic-endothelial-cell_D16 GSE139377.ERG.aortic-endothelial-cell_D16 140 bp overlap
ESR1 2 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 155 bp overlap
ChIP MCF-7_RUNX2_DOX GSE86538.ESR1.MCF-7_RUNX2_DOX 148 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 194 bp overlap
FOXA1 26 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 594 bp overlap
ChIP CFPAC-1_FOXA1-KO GSE119930.FOXA1.CFPAC-1_FOXA1-KO 362 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 419 bp overlap
ChIP HepG2 ENCFF207NVJ 281 bp overlap
ChIP HepG2 ENCFF740VZW 285 bp overlap
ChIP LNCaP GSE64656.FOXA1.LNCaP 237 bp overlap
ChIP LNCaP GSE52725.FOXA1.LNCaP 162 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 236 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 173 bp overlap
ChIP LNCaP_DHT GSE28264.FOXA1.LNCaP_DHT 144 bp overlap
ChIP LNCaP_DSG GSE114737.FOXA1.LNCaP_DSG 243 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 258 bp overlap
ChIP LNCaP_F266S_shFOXA1 GSE128883.FOXA1.LNCaP_F266S_shFOXA1 255 bp overlap
ChIP LNCaP_FENG_shFOXA1_Ethanol GSE128883.FOXA1.LNCaP_FENG_shFOXA1_Ethanol 190 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 251 bp overlap
ChIP LNCaP_L388M_shFOXA1 GSE128883.FOXA1.LNCaP_L388M_shFOXA1 165 bp overlap
ChIP LNCaP_R1881 GSE69043.FOXA1.LNCaP_R1881 231 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 172 bp overlap
ChIP LNCaP_SHGATA2_R1881 GSE69043.FOXA1.LNCaP_SHGATA2_R1881 175 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 219 bp overlap
ChIP LNCaP_VEH GSE114266.FOXA1.LNCaP_VEH 331 bp overlap
ChIP MCF-7_E2 GSE60270.FOXA1.MCF-7_E2 198 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 320 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 537 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 212 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 193 bp overlap
FOXA2 11 datasets
ChIP CFPAC-1 GSE119930.FOXA2.CFPAC-1 609 bp overlap
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 630 bp overlap
ChIP CFPAC-1_HNF1B-KO GSE119930.FOXA2.CFPAC-1_HNF1B-KO 227 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 630 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 145 bp overlap
ChIP DE DE-FOXA2-1 630 bp overlap
ChIP DE DE-FOXA2-2 630 bp overlap
ChIP HepG2 ENCFF533COJ 297 bp overlap
ChIP HepG2 ENCFF894AYY 381 bp overlap
ChIP liver ENCSR080XEY.FOXA2.liver 152 bp overlap
ChIP liver_CARN1618 ERP008682.FOXA2.liver_CARN1618 268 bp overlap
GABPA 1 dataset
ChIP VCaP_R1881 GSE49091.GABPA.VCaP_R1881 177 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 539 bp overlap
ChIP DE DE-GATA4-2 630 bp overlap
ChIP foregut GSE117136.GATA4.foregut 464 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 525 bp overlap
ChIP DE DE-GATA6-2 630 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 482 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 570 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 520 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 468 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 630 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 523 bp overlap
ChIP foregut GSE117136.GATA6.foregut 478 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 550 bp overlap
HDAC1 1 dataset
ChIP K-562 ENCSR387UWP.HDAC1.K-562 238 bp overlap
HLF 2 datasets
ChIP Hep-G2 ENCSR528PSI.HLF.Hep-G2 174 bp overlap
ChIP HepG2 ENCFF854JLR 245 bp overlap
ID3 1 dataset
ChIP K-562 ENCSR005NMT.ID3.K-562 455 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 358 bp overlap
ChIP K562 ENCFF348IBL 277 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 119 bp overlap
NFIL3 1 dataset
ChIP HepG2 ENCFF686VLI 337 bp overlap
NR2F1 1 dataset
ChIP K-562 ENCSR970NKQ.NR2F1.K-562 219 bp overlap
NR3C1 3 datasets
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 178 bp overlap
ChIP SUM159PT GSE152203.NR3C1.SUM159PT 359 bp overlap
ChIP U2OS_SHHIC5 GSE65847.NR3C1.U2OS_SHHIC5 236 bp overlap
PGR 1 dataset
ChIP AB32 GSE31129.PGR.AB32 251 bp overlap
RUNX2 1 dataset
ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 559 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 242 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 630 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 611 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 410 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 314 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 506 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 369 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 266 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 254 bp overlap
SMAD3 1 dataset
ChIP endoderm GSE29422.SMAD3.endoderm 202 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 207 bp overlap
SMARCC1 1 dataset
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 229 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 279 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 227 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 630 bp overlap
SOX6 1 dataset
ChIP K-562 ENCSR788RSW.SOX6.K-562 289 bp overlap
STAT3 1 dataset
ChIP SUM159PT GSE152203.STAT3.SUM159PT 151 bp overlap
TFAP4 1 dataset
ChIP DLD-1 GSE46935.TFAP4.DLD-1 480 bp overlap
VDR 1 dataset
ChIP THP-1_1d_1-25-OH-2D3 GSE89431.VDR.THP-1_1d_1-25-OH-2D3 184 bp overlap
YY1AP1 1 dataset
ChIP PC-9_1DF GSE131687.YY1AP1.PC-9_1DF 253 bp overlap
ZBTB6 1 dataset
ChIP HEK293 GSE76494.ZBTB6.HEK293 172 bp overlap
ZBTB7A 1 dataset
ChIP K-562 GSE103445.ZBTB7A.K-562 111 bp overlap
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