chr11 : 129,453,627 – 129,453,955
328 bp 42 TFs 0 linked genes
This 328 bp open chromatin element has no linked target genes and is bound by 42 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:129,448,627 – 129,458,955
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
42 transcription factors
Source
Cell type
AR 24 datasets
ChIP LNCaP-clone-FGC_DHT-ABBV-075 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-075 144 bp overlap
ChIP LNCaP-clone-FGC_DHT-ABBV-744 GSE118247.AR.LNCaP-clone-FGC_DHT-ABBV-744 65 bp overlap
ChIP LNCaP-clone-FGC_DHT-DMSO GSE118247.AR.LNCaP-clone-FGC_DHT-DMSO 328 bp overlap
ChIP LNCaP_DHT GSE43720.AR.LNCaP_DHT 168 bp overlap
ChIP LNCaP_FOXA1 ERP003503.AR.LNCaP_FOXA1 107 bp overlap
ChIP LNCaP_R1881 GSE62492.AR.LNCaP_R1881 60 bp overlap
ChIP LNCaP_SHCTR_DHT GSE62492.AR.LNCaP_SHCTR_DHT 121 bp overlap
ChIP LNCaP_SHFOXP1_DHT GSE62492.AR.LNCaP_SHFOXP1_DHT 176 bp overlap
ChIP LNCaP_sgCHD1 GSE117430.AR.LNCaP_sgCHD1 84 bp overlap
ChIP LNCaP_sgCtrl GSE117430.AR.LNCaP_sgCtrl 207 bp overlap
ChIP VCaP_DHT GSE79128.AR.VCaP_DHT 71 bp overlap
ChIP VCaP_DHT24H GSE58428.AR.VCaP_DHT24H 185 bp overlap
ChIP VCaP_DHT24H_SHFOXA1 GSE58428.AR.VCaP_DHT24H_SHFOXA1 122 bp overlap
ChIP VCaP_DHT24H_SHFOXP1 GSE58428.AR.VCaP_DHT24H_SHFOXP1 328 bp overlap
ChIP VCaP_DHT24H_SHRUNX1 GSE58428.AR.VCaP_DHT24H_SHRUNX1 215 bp overlap
ChIP VCaP_SH1_DHT GSE79128.AR.VCaP_SH1_DHT 118 bp overlap
ChIP VCaP_SH2_DHT GSE79128.AR.VCaP_SH2_DHT 67 bp overlap
ChIP VCaP_SH3_DHT GSE79128.AR.VCaP_SH3_DHT 50 bp overlap
ChIP prostate GSE65478.AR.prostate 98 bp overlap
ChIP prostate-cancer_C4-2-CON GSE136128.AR.prostate-cancer_C4-2-CON 65 bp overlap
ChIP prostate_1636_T GSE130408.AR.prostate_1636_T 69 bp overlap
ChIP prostate_1853_T GSE130408.AR.prostate_1853_T 147 bp overlap
ChIP prostate_2815_T GSE130408.AR.prostate_2815_T 122 bp overlap
ChIP prostate_P25 GSE130408.AR.prostate_P25 76 bp overlap
ASH2L 3 datasets
ChIP VCaP GSE60841.ASH2L.VCaP 201 bp overlap
ChIP VCaP_R1881 GSE60841.ASH2L.VCaP_R1881 217 bp overlap
ChIP WA01 ENCSR850KIP.ASH2L.WA01 328 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 156 bp overlap
BRD4 4 datasets
ChIP CHL-1 GSE95585.BRD4.CHL-1 328 bp overlap
ChIP LNCaP-C4-2_F133V GSE88871.BRD4.LNCaP-C4-2_F133V 278 bp overlap
ChIP LNCaP-C4-2_F133V_JQ1 GSE88871.BRD4.LNCaP-C4-2_F133V_JQ1 181 bp overlap
ChIP LNCaP-C4-2_OE GSE88871.BRD4.LNCaP-C4-2_OE 282 bp overlap
CDX2 1 dataset
ChIP Caco-2_DIFF GSE23436.CDX2.Caco-2_DIFF 114 bp overlap
CTBP2 1 dataset
ChIP WA01 ENCSR000EUO.CTBP2.WA01 282 bp overlap
CTCF 2 datasets
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 215 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 139 bp overlap
DPF2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.DPF2.BIN-67_lentivirus-SMARCA4 87 bp overlap
ELF3 1 dataset
ChIP PDAC_KOKLF5 GSE64557.ELF3.PDAC_KOKLF5 262 bp overlap
ERG 2 datasets
ChIP VCaP_SH1_DHT GSE79128.ERG.VCaP_SH1_DHT 73 bp overlap
ChIP VCaP_SH3_DHT GSE79128.ERG.VCaP_SH3_DHT 50 bp overlap
ESR1 2 datasets
ChIP breast_tumor_Male_10 GSE104399.ESR1.breast_tumor_Male_10 163 bp overlap
ChIP primary-endometrium-cancer_E2_DSG GSE114737.ESR1.primary-endometrium-cancer_E2_DSG 56 bp overlap
FOXA1 9 datasets
ChIP LNCaP GSE56288.FOXA1.LNCaP 58 bp overlap
ChIP PDAC_KOKLF5 GSE64557.FOXA1.PDAC_KOKLF5 217 bp overlap
ChIP VCaP_DHT24H GSE58428.FOXA1.VCaP_DHT24H 88 bp overlap
ChIP primary-prostate-cancer_G2_DSG GSE114737.FOXA1.primary-prostate-cancer_G2_DSG 202 bp overlap
ChIP primary-prostate-cancer_P2_DSG GSE114737.FOXA1.primary-prostate-cancer_P2_DSG 67 bp overlap
ChIP prostate_2480 GSE130408.FOXA1.prostate_2480 55 bp overlap
ChIP prostate_2483 GSE130408.FOXA1.prostate_2483 83 bp overlap
ChIP prostate_P13_T GSE130408.FOXA1.prostate_P13_T 122 bp overlap
ChIP prostate_P5_T GSE130408.FOXA1.prostate_P5_T 101 bp overlap
GRHL2 1 dataset
ChIP HBE GSE46194.GRHL2.HBE 173 bp overlap
HOXB13 10 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 210 bp overlap
ChIP prostate_2030 GSE130408.HOXB13.prostate_2030 58 bp overlap
ChIP prostate_2078 GSE130408.HOXB13.prostate_2078 56 bp overlap
ChIP prostate_2483 GSE130408.HOXB13.prostate_2483 79 bp overlap
ChIP prostate_P13_T GSE130408.HOXB13.prostate_P13_T 86 bp overlap
ChIP prostate_P25 GSE130408.HOXB13.prostate_P25 90 bp overlap
ChIP prostate_P27 GSE130408.HOXB13.prostate_P27 129 bp overlap
ChIP prostate_P29_T GSE130408.HOXB13.prostate_P29_T 84 bp overlap
ChIP prostate_P5 GSE130408.HOXB13.prostate_P5 66 bp overlap
ChIP prostate_P5_T GSE130408.HOXB13.prostate_P5_T 156 bp overlap
JUN 3 datasets
ChIP ESC S24-ESC-d0-JUN-exp1 160 bp overlap
ChIP ESC S34-ESC-d0-JUN-exp2 66 bp overlap
ChIP HUES-8 GSE109524.JUN.HUES-8 328 bp overlap
KDM5B 1 dataset
ChIP HCC2157 GSE46055.KDM5B.HCC2157 95 bp overlap
KLF4 3 datasets
ChIP HAP1 GSE130417.KLF4.HAP1 153 bp overlap
ChIP hiPSC GSE56567.KLF4.hiPSC 211 bp overlap
ChIP keratinocyte_diff GSE57702.KLF4.keratinocyte_diff 136 bp overlap
KMT2D 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.KMT2D.BIN-67_lentivirus-SMARCA4 139 bp overlap
MAX 2 datasets
ChIP H1 ENCFF914VQY 60 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 145 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 211 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 52 bp overlap
OTX2 1 dataset
ChIP WTC11 ENCFF634NAO 235 bp overlap
POLR2A 2 datasets
ChIP body of pancreas ENCFF501FEC 328 bp overlap
ChIP prostate gland ENCFF881OMH 52 bp overlap
POU5F1 3 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 171 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 238 bp overlap
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 239 bp overlap
RAD21 3 datasets
ChIP HAP1 GSE152721.RAD21.HAP1 82 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 140 bp overlap
ChIP HepG2 ENCFF906QIS 225 bp overlap
RBBP5 2 datasets
ChIP WA01 ENCSR000AQC.RBBP5.WA01 170 bp overlap
ChIP WA01 ENCSR000AQC.RBBP5.WA01 108 bp overlap
RBPJ 2 datasets
ChIP HCC1599 GSE116871.RBPJ.HCC1599 231 bp overlap
ChIP HCC1599_GSI GSE116871.RBPJ.HCC1599_GSI 150 bp overlap
RUNX1 1 dataset
ChIP VCaP_DHT24H GSE58428.RUNX1.VCaP_DHT24H 100 bp overlap
SMAD3 1 dataset
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 197 bp overlap
SMARCA4 3 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4 230 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 328 bp overlap
ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 147 bp overlap
SMARCB1 1 dataset
ChIP hiPSC_WT GSE124903.SMARCB1.hiPSC_WT 102 bp overlap
SMARCC1 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4 134 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCC1.BIN-67_lentivirus-SMARCA4-T910M 185 bp overlap
SOX2 4 datasets
ChIP HCC95 GSE137459.SOX2.HCC95 189 bp overlap
ChIP LK2_DNp63 GSE137459.SOX2.LK2_DNp63 199 bp overlap
ChIP LK2_GFP GSE137459.SOX2.LK2_GFP 250 bp overlap
ChIP hiPSC GSE56567.SOX2.hiPSC 143 bp overlap
SS18 2 datasets
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.SS18.BIN-67_lentivirus-SMARCA4 91 bp overlap
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SS18.BIN-67_lentivirus-SMARCA4-T910M 193 bp overlap
STAT3 1 dataset
ChIP MDA-MB-468_EtOH GSE85579.STAT3.MDA-MB-468_EtOH 94 bp overlap
TAF1 3 datasets
ChIP H1 ENCFF478SZO 130 bp overlap
ChIP H1 ENCFF478SZO 328 bp overlap
ChIP WA01 ENCSR000BHO.TAF1.WA01 182 bp overlap
TCF3 1 dataset
ChIP NPC GSE154479.TCF3.NPC 227 bp overlap
TRIM28 1 dataset
ChIP WIBR3_NAIVE GSE84382.TRIM28.WIBR3_NAIVE 117 bp overlap
Wt1 1 dataset
Motif ES_0h ES_0h-Wt1_MA1627.2 10 bp overlap
YY1 1 dataset
ChIP H1 ENCFF524BTL 59 bp overlap
ZNF331 1 dataset
ChIP GM23338 ENCSR918LRB.ZNF331.GM23338 131 bp overlap
ZNF462 2 datasets
ChIP GM23338 ENCFF896CCA 224 bp overlap
ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 297 bp overlap
Zfp335 1 dataset
Motif ES_0h ES_0h-Zfp335_MA2002.2 7 bp overlap
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