chr11 : 110,850,797 110,851,372
575 bp 34 TFs 0 linked genes
This 575 bp open chromatin element has no linked target genes and is bound by 34 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:110,845,797 – 110,856,372
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARNT 1 dataset
ChIP SK-MEL-28 GSE85352.ARNT.SK-MEL-28 408 bp overlap
ATRX 1 dataset
ChIP metastatic-neuroblastoma_CHLA90 GSE100148.ATRX.metastatic-neuroblastoma_CHLA90 427 bp overlap
BNC2 1 dataset
ChIP SK-N-SH ENCFF174EMC 425 bp overlap
BRD4 1 dataset
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 150 bp overlap
CSDC2 2 datasets
ChIP SK-N-SH ENCFF868MXA 343 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR474KBG.CSDC2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 385 bp overlap
CTCF 1 dataset
ChIP SK-N-SH ENCFF575DMG 383 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 440 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCSR000BUA.EP300.SK-N-SH 285 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 575 bp overlap
ChIP DE DE-FOXA2-2 575 bp overlap
GATA2 5 datasets
ChIP ESF GSE108408.GATA2.ESF 299 bp overlap
ChIP SH-SY5Y ENCFF485YIB 381 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 298 bp overlap
ChIP TF1 GSE73207.GATA2.TF1 261 bp overlap
ChIP primary-endometrial-stromal-cell_IVD_P2 GSE145673.GATA2.primary-endometrial-stromal-cell_IVD_P2 330 bp overlap
GATA3 1 dataset
ChIP SK-N-SH ENCFF040SSB 318 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 575 bp overlap
ChIP DE DE-GATA4-2 575 bp overlap
ChIP foregut GSE117136.GATA4.foregut 276 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 204 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 575 bp overlap
ChIP DE DE-GATA6-2 575 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 311 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 575 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 575 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 575 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 307 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 575 bp overlap
GLIS3 1 dataset
ChIP SK-N-SH ENCFF370MHZ 285 bp overlap
ISL1 1 dataset
ChIP SK-N-SH ENCFF285GEQ 401 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 362 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 233 bp overlap
MED1 1 dataset
ChIP SGBS GSE64233.MED1.SGBS 134 bp overlap
MYC 1 dataset
ChIP P493-6_scramble-shRNA GSE101853.MYC.P493-6_scramble-shRNA 174 bp overlap
NFIC 1 dataset
ChIP SK-N-SH ENCSR000BSV.NFIC.SK-N-SH 169 bp overlap
PATZ1 1 dataset
ChIP SK-N-SH ENCFF650NCN 334 bp overlap
PBX3 1 dataset
ChIP SK-N-SH ENCFF876BMC 317 bp overlap
RNF2 1 dataset
ChIP fibroblast GSE139053.RNF2.fibroblast 291 bp overlap
SIN3A 1 dataset
ChIP SK-N-SH ENCSR000BPB.SIN3A.SK-N-SH 184 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 575 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 397 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 278 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 575 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 517 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 479 bp overlap
TAL1 1 dataset
ChIP PRIMA2 GSE33850.TAL1.PRIMA2 157 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 391 bp overlap
TCF4 2 datasets
ChIP SK-N-SH ENCFF270OWF 274 bp overlap
ChIP SK-N-SH ENCFF270OWF 437 bp overlap
TP53 4 datasets
ChIP GM00011 GSE55727.TP53.GM00011 278 bp overlap
ChIP SJSA-1_nutlin GSE86164.TP53.SJSA-1_nutlin 226 bp overlap
ChIP U2OS_NUT GSE46641.TP53.U2OS_NUT 214 bp overlap
ChIP UACC-257_nutlin_2h GSE100292.TP53.UACC-257_nutlin_2h 288 bp overlap
TP73_TA 1 dataset
ChIP SaOS-2 GSE15780.TP73_TA.SaOS-2 260 bp overlap
ZFP3 2 datasets
ChIP SK-N-SH ENCFF981MBE 441 bp overlap
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR581GUY.ZFP3.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 366 bp overlap