chr11 : 76,554,474 76,555,062
588 bp 45 TFs 6 linked genes
This 588 bp open chromatin element is linked to 6 target genes and is bound by 45 transcription factors.
Linked Genes
6 genes
Gene Expression Dist. to TSS Distance Link type
EMSY 109.8 kb Distal Multiome
EMSY-DT 110.1 kb Distal Multiome
GVQW3 173.5 kb Distal Multiome
THAP12 173.7 kb Distal Multiome
TSKU-AS1 228.3 kb Distal Multiome
TSKU 229.4 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:76,549,474 – 76,560,062
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
45 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_1F5_SIFOXA1 GSE30623.AR.LNCaP_1F5_SIFOXA1 118 bp overlap
ATF2 1 dataset
ChIP WA01 ENCSR000BQU.ATF2.WA01 245 bp overlap
BRD3 1 dataset
ChIP K-562_DMSO GSE138084.BRD3.K-562_DMSO 174 bp overlap
BRD4 2 datasets
ChIP CD4_JG1 GSE33281.BRD4.CD4_JG1 349 bp overlap
ChIP K-562_iBET-BD2-IFNG GSE138084.BRD4.K-562_iBET-BD2-IFNG 182 bp overlap
BRF1 1 dataset
ChIP H9 GSE94418.BRF1.H9 136 bp overlap
CBFB 1 dataset
ChIP ME-1 GSE46044.CBFB.ME-1 136 bp overlap
CREB1 1 dataset
ChIP H1 ENCFF955PMP 288 bp overlap
CREBBP 1 dataset
ChIP MCF-7 ERP000901.CREBBP.MCF-7 150 bp overlap
E2F6 5 datasets
ChIP H1 ENCFF785DWK 188 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 158 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 157 bp overlap
ChIP K562 ENCFF136LTS 241 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 275 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 549 bp overlap
ESR1 3 datasets
ChIP Ishikawa_ETV4-KO2_Mili GSE129803.ESR1.Ishikawa_ETV4-KO2_Mili 172 bp overlap
ChIP MDA-MB-134-VI_ESTROGEN GSE51022.ESR1.MDA-MB-134-VI_ESTROGEN 253 bp overlap
ChIP MDA-MB-134-VI_ETOH GSE51022.ESR1.MDA-MB-134-VI_ETOH 257 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 588 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 164 bp overlap
GATA2 1 dataset
ChIP ME-1_CBFB-MYH11-KD GSE117138.GATA2.ME-1_CBFB-MYH11-KD 287 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 588 bp overlap
ChIP DE DE-GATA4-2 588 bp overlap
ChIP foregut GSE117136.GATA4.foregut 413 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 572 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 375 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 588 bp overlap
ChIP DE DE-GATA6-2 588 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 588 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 588 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 588 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 588 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 588 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 588 bp overlap
ChIP foregut GSE117136.GATA6.foregut 387 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 306 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 326 bp overlap
GSPT2 1 dataset
ChIP HEK293T GSE35197.GSPT2.HEK293T 195 bp overlap
GTF2B 1 dataset
ChIP IMR-90_TERT GSE38303.GTF2B.IMR-90_TERT 143 bp overlap
GTF3C2 1 dataset
ChIP T98G GSE120162.GTF3C2.T98G 234 bp overlap
IKZF1 2 datasets
ChIP K-562 ENCSR395HWC.IKZF1.K-562 290 bp overlap
ChIP K562 ENCFF348IBL 472 bp overlap
JUN 1 dataset
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 467 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 180 bp overlap
ChIP H1 ENCFF914VQY 159 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 131 bp overlap
ChIP WTC11 ENCFF223QFY 372 bp overlap
ChIP WTC11 ENCFF223QFY 169 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 109 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 377 bp overlap
OTX1 1 dataset
ChIP K562 ENCFF829SLD 274 bp overlap
POLR2A 2 datasets
ChIP H1 ENCFF833NJP 285 bp overlap
ChIP spleen ENCFF446ZGT 346 bp overlap
POU4F2 1 dataset
ChIP HNPC_DIF GSE74814.POU4F2.HNPC_DIF 140 bp overlap
SCRT1 1 dataset
ChIP HEK293 ENCSR605MGM.SCRT1.HEK293 239 bp overlap
SCRT2 1 dataset
ChIP HEK293 ENCFF711QQB 131 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 153 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 588 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 588 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 506 bp overlap
ChIP HUVEC-C_TGFB1 GSE134556.SMAD2-3.HUVEC-C_TGFB1 496 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 538 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 443 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 588 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 588 bp overlap
SMAD3 2 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 171 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 186 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 426 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 512 bp overlap
SUPT5H 2 datasets
ChIP HCT-116_pThr806 GSE138548.SUPT5H.HCT-116_pThr806 145 bp overlap
ChIP K562 ENCFF902PAW 437 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 479 bp overlap
TP63 1 dataset
ChIP foreskin GSE126390.TP63.foreskin 287 bp overlap
ZBTB7A 1 dataset
ChIP VCaP_FBS GSE123089.ZBTB7A.VCaP_FBS 210 bp overlap
ZNF143 2 datasets
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 156 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 158 bp overlap
ZNF284 1 dataset
ChIP HEK293T GSE78099.ZNF284.HEK293T 235 bp overlap
ZNF736 1 dataset
ChIP HEK293T GSE78099.ZNF736.HEK293T 99 bp overlap
ZNF75A 1 dataset
ChIP K562 ENCFF410JIO 345 bp overlap