Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

43 transcription factors

BCOR 1 dataset

ChIP WA01_RNF2-R_Doxycyclin GSE104690.BCOR.WA01_RNF2-R_Doxycyclin 366 bp overlap

BRD4 2 datasets

ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 159 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 212 bp overlap

CHD4 1 dataset

ChIP pre-B-cell GSE107886.CHD4.pre-B-cell 229 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 400 bp overlap

CTCF 1 dataset

Motif DE_24h DE_24h-CTCF_MA0139.2 15 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 384 bp overlap

EZH2 2 datasets

ChIP A-1847 GSE95643.EZH2.A-1847 114 bp overlap

ChIP THP-1 GSE135024.EZH2.THP-1 222 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 414 bp overlap

ChIP DE DE-FOXA2-2 403 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 303 bp overlap

ChIP DE DE-GATA4-2 451 bp overlap

GATA6 5 datasets

ChIP DE DE-GATA6-1 343 bp overlap

ChIP DE DE-GATA6-2 451 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 308 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 451 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 342 bp overlap

GLIS2 1 dataset

Motif DE_24h DE_24h-GLIS2_MA0736.1 14 bp overlap

GLIS3 1 dataset

Motif DE_24h DE_24h-GLIS3_MA0737.1 14 bp overlap

HDAC2 1 dataset

ChIP pre-B-cell GSE107886.HDAC2.pre-B-cell 256 bp overlap

IKZF1 1 dataset

ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 451 bp overlap

IKZF3 1 dataset

ChIP pre-B-cell GSE107886.IKZF3.pre-B-cell 284 bp overlap

JUN 4 datasets

ChIP DE_D1 S40-DE-d1-JUN-exp2 234 bp overlap

ChIP DE_D2 S02-DE-d2-JUN-exp1 429 bp overlap

ChIP DE_D2 S54-DE-d2-JUN-exp2 113 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 391 bp overlap

KLF4 1 dataset

Motif DE_24h DE_24h-KLF4_MA0039.5 8 bp overlap

MLLT3 1 dataset

ChIP THP-1 GSE79899.MLLT3.THP-1 56 bp overlap

MTA2 1 dataset

ChIP pre-B-cell GSE107886.MTA2.pre-B-cell 263 bp overlap

MYB 1 dataset

ChIP Loucy GSE94000.MYB.Loucy 68 bp overlap

NANOG 4 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 61 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 433 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 451 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 358 bp overlap

NKX2-1 1 dataset

ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 304 bp overlap

POU2AF1 1 dataset

ChIP pre-B-cell GSE107886.POU2AF1.pre-B-cell 61 bp overlap

POU2F2 1 dataset

ChIP pre-B-cell GSE107886.POU2F2.pre-B-cell 253 bp overlap

POU5F1 1 dataset

ChIP BJ_INDUCED GSE36570.POU5F1.BJ_INDUCED 179 bp overlap

RNF2 1 dataset

ChIP WA09 GSE105028.RNF2.WA09 451 bp overlap

RUNX1 1 dataset

ChIP 697 GSE138031.RUNX1.697 383 bp overlap

SIN3A 2 datasets

ChIP WA01 ENCSR000BIS.SIN3A.WA01 114 bp overlap

ChIP WA01 ENCSR000EBO.SIN3A.WA01 120 bp overlap

SMAD2 1 dataset

ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 215 bp overlap

SMAD2-3 4 datasets

ChIP HGrC1_EV GSE138496.SMAD2-3.HGrC1_EV 98 bp overlap

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 444 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 451 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 451 bp overlap

SMAD2_3 5 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 451 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 451 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 451 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 451 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 416 bp overlap

SMAD3 1 dataset

ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 165 bp overlap

SMARCA4 3 datasets

ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 451 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 438 bp overlap

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 301 bp overlap

SMARCB1 1 dataset

ChIP hiPSC GSE124903.SMARCB1.hiPSC 441 bp overlap

SMARCC1 2 datasets

ChIP DE_D1 S15-DE-d1-BAF155-exp1 207 bp overlap

ChIP hiPSC GSE124903.SMARCC1.hiPSC 355 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 360 bp overlap

SOX2 3 datasets

ChIP HNSC GSE69479.SOX2.HNSC 451 bp overlap

ChIP hiPSC GSE67282.SOX2.hiPSC 339 bp overlap

ChIP hiPSC_KDP53 GSE67282.SOX2.hiPSC_KDP53 241 bp overlap

T 2 datasets

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 292 bp overlap

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 236 bp overlap

TFAP2C 1 dataset

ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 131 bp overlap

ZIC1 1 dataset

Motif DE_24h DE_24h-ZIC1_MA0696.1 14 bp overlap

ZIC4 1 dataset

Motif DE_24h DE_24h-ZIC4_MA0751.2 14 bp overlap

ZIC5 1 dataset

Motif DE_24h DE_24h-ZIC5_MA1584.2 15 bp overlap

ZNF281 1 dataset

Motif DE_24h DE_24h-ZNF281_MA1630.3 10 bp overlap

Genome Browser