chr9 : 111,030,351 111,030,609
258 bp 36 TFs 1 linked gene
This 258 bp open chromatin element is linked to LPAR1 and is bound by 36 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LPAR1 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:111,025,351 – 111,035,609
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
36 transcription factors
Source
Cell type
ATF7 1 dataset
ChIP GM12878 ENCFF037PYH 125 bp overlap
BRD3 2 datasets
ChIP MV4-11_DMSO GSE120715.BRD3.MV4-11_DMSO 102 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD3.MV4-11_IBET151_50nM 189 bp overlap
BRD4 5 datasets
ChIP HEK293_sgNT GSE129407.BRD4.HEK293_sgNT 153 bp overlap
ChIP MOLM-14_CA25 GSE65138.BRD4.MOLM-14_CA25 258 bp overlap
ChIP MOLM-14_DMSO GSE65138.BRD4.MOLM-14_DMSO 73 bp overlap
ChIP MV4-11_DMSO GSE120715.BRD4.MV4-11_DMSO 84 bp overlap
ChIP MV4-11_IBET151_50nM GSE120715.BRD4.MV4-11_IBET151_50nM 180 bp overlap
CDK8 1 dataset
ChIP MOLM-14 GSE65138.CDK8.MOLM-14 220 bp overlap
CHD7 1 dataset
ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 115 bp overlap
DDX5 1 dataset
ChIP BT-549 GSE112961.DDX5.BT-549 111 bp overlap
E2F6 2 datasets
ChIP H1 ENCFF785DWK 236 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 223 bp overlap
EGR1 1 dataset
ChIP macrophage_D1 GSE136216.EGR1.macrophage_D1 51 bp overlap
EP300 1 dataset
ChIP SK-N-SH ENCFF829RWA 86 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 112 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 258 bp overlap
ChIP DE DE-GATA4-2 258 bp overlap
ChIP foregut GSE117136.GATA4.foregut 258 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 232 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 148 bp overlap
ChIP DE DE-GATA6-2 258 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 258 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 231 bp overlap
ChIP foregut GSE117136.GATA6.foregut 258 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 258 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 232 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 134 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 237 bp overlap
ISL1 1 dataset
ChIP SK-N-BE2-C GSE94822.ISL1.SK-N-BE2-C 57 bp overlap
MAX 5 datasets
ChIP H1 ENCFF601FOM 163 bp overlap
ChIP H1 ENCFF914VQY 68 bp overlap
ChIP SK-N-SH ENCSR000BVD.MAX.SK-N-SH 79 bp overlap
ChIP WA01 ENCSR000EUP.MAX.WA01 133 bp overlap
ChIP WTC11 ENCFF223QFY 258 bp overlap
MTA2 1 dataset
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 137 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 165 bp overlap
MYC 1 dataset
ChIP BJ_INDUCED GSE36570.MYC.BJ_INDUCED 137 bp overlap
MYCN 4 datasets
ChIP CHP-134 GSE129588.MYCN.CHP-134 133 bp overlap
ChIP COG-N-415 GSE138295.MYCN.COG-N-415 123 bp overlap
ChIP LA-N-5 GSE138295.MYCN.LA-N-5 258 bp overlap
ChIP SK-N-BE2-C GSE94822.MYCN.SK-N-BE2-C 141 bp overlap
NANOG 1 dataset
ChIP hESC GSE18292.NANOG.hESC 117 bp overlap
NCAPH2 1 dataset
ChIP IMR-90_FLAG_OIS GSE118494.NCAPH2.IMR-90_FLAG_OIS 121 bp overlap
POU2F1 1 dataset
ChIP IMR-90_TERT GSE38303.POU2F1.IMR-90_TERT 151 bp overlap
RAD21 2 datasets
ChIP hiPSC_CVI GSE106870.RAD21.hiPSC_CVI 84 bp overlap
ChIP hiPSC_IIA11 GSE106870.RAD21.hiPSC_IIA11 92 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 258 bp overlap
SNAI2 1 dataset
ChIP SMS-CTR_D48 GSE137168.SNAI2.SMS-CTR_D48 131 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 258 bp overlap
SOX2 2 datasets
ChIP HNSC GSE69479.SOX2.HNSC 242 bp overlap
ChIP hESC GSE18292.SOX2.hESC 95 bp overlap
TCF12 1 dataset
ChIP SK-N-SH ENCFF147AHB 101 bp overlap
TCF4 1 dataset
ChIP SK-N-SH ENCFF270OWF 106 bp overlap
TRIM28 1 dataset
ChIP AF22 GSE84259.TRIM28.AF22 258 bp overlap
TWIST1 6 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 145 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 104 bp overlap
ChIP SHEP-21N GSE80151.TWIST1.SHEP-21N 74 bp overlap
ChIP SHEP-21N_24h GSE80151.TWIST1.SHEP-21N_24h 74 bp overlap
ChIP SHEP-21N_DOX_0H GSE80151.TWIST1.SHEP-21N_DOX_0H 104 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 145 bp overlap
USF1 3 datasets
ChIP H1 ENCFF090WVU 142 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 60 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 86 bp overlap
ZNF324 1 dataset
ChIP HEK293 GSE76494.ZNF324.HEK293 258 bp overlap
ZNF687 1 dataset
ChIP GM12878 ENCFF233SGE 126 bp overlap